Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 SNORD116-22-201ENST00000384430 92 ntBASIC-1.84□□□□□ -2.7
SNRNP200O75643 SNORD116-21-201ENST00000384507 92 ntBASIC-1.84□□□□□ -2.7
SNRNP200O75643 RNU6-523P-201ENST00000516304 54 ntBASIC-1.84□□□□□ -2.7
SNRNP200O75643 LMBR1-222ENST00000638959 93 ntTSL 5 BASIC-1.84□□□□□ -2.7
SNRNP200O75643 RNU6-755P-201ENST00000364400 103 ntBASIC-1.85□□□□□ -2.71
SNRNP200O75643 RNY3P8-201ENST00000411366 126 ntBASIC-1.85□□□□□ -2.71
SNRNP200O75643 SNORD63.2-201ENST00000516303 64 ntBASIC-1.85□□□□□ -2.71
SNRNP200O75643 MIR3139-201ENST00000579145 76 ntBASIC-1.85□□□□□ -2.71
SNRNP200O75643 FTX_4.1-201ENST00000616291 147 ntBASIC-1.85□□□□□ -2.71
SNRNP200O75643 RNU6-330P-201ENST00000363015 107 ntBASIC-1.85□□□□□ -2.71
SNRNP200O75643 MIR7978-201ENST00000636158 59 ntBASIC-1.86□□□□□ -2.71
SNRNP200O75643 RNU6-766P-201ENST00000362478 107 ntBASIC-1.87□□□□□ -2.71
SNRNP200O75643 RNU6-497P-201ENST00000365316 104 ntBASIC-1.87□□□□□ -2.71
SNRNP200O75643 RNY4P18-201ENST00000391107 89 ntBASIC-1.87□□□□□ -2.71
SNRNP200O75643 RNU6-542P-201ENST00000516405 103 ntBASIC-1.87□□□□□ -2.71
SNRNP200O75643 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-1.87□□□□□ -2.71
SNRNP200O75643 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.87□□□□□ -2.71
SNRNP200O75643 Y_RNA.349-201ENST00000365406 102 ntBASIC-1.87□□□□□ -2.71
SNRNP200O75643 RNU6-604P-201ENST00000390917 100 ntBASIC-1.87□□□□□ -2.71
SNRNP200O75643 Y_RNA.812-201ENST00000610788 101 ntBASIC-1.87□□□□□ -2.71
SNRNP200O75643 Y_RNA.784-201ENST00000613803 101 ntBASIC-1.87□□□□□ -2.71
SNRNP200O75643 Y_RNA.787-201ENST00000616522 101 ntBASIC-1.87□□□□□ -2.71
SNRNP200O75643 Y_RNA.780-201ENST00000617336 101 ntBASIC-1.87□□□□□ -2.71
SNRNP200O75643 Y_RNA.801-201ENST00000619005 101 ntBASIC-1.87□□□□□ -2.71
SNRNP200O75643 SNORA40.13-201ENST00000516379 120 ntBASIC-1.88□□□□□ -2.71
SNRNP200O75643 MIR154-201ENST00000385243 84 ntBASIC-1.88□□□□□ -2.71
SNRNP200O75643 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.88□□□□□ -2.71
SNRNP200O75643 RNU6-659P-201ENST00000516454 104 ntBASIC-1.88□□□□□ -2.71
SNRNP200O75643 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.88□□□□□ -2.71
SNRNP200O75643 AC013734.1-201ENST00000619329 111 ntBASIC-1.88□□□□□ -2.71
SNRNP200O75643 MIR664A-201ENST00000626086 82 ntBASIC-1.88□□□□□ -2.71
SNRNP200O75643 RNU6-974P-201ENST00000384099 108 ntBASIC-1.9□□□□□ -2.71
SNRNP200O75643 MIR496-201ENST00000385226 102 ntBASIC-1.9□□□□□ -2.71
SNRNP200O75643 RNU6-1247P-201ENST00000516622 98 ntBASIC-1.9□□□□□ -2.71
SNRNP200O75643 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.9□□□□□ -2.71
SNRNP200O75643 RNU6-196P-201ENST00000384315 107 ntBASIC-1.9□□□□□ -2.71
SNRNP200O75643 Y_RNA.699-201ENST00000516803 93 ntBASIC-1.9□□□□□ -2.71
SNRNP200O75643 RNU6-194P-201ENST00000363862 105 ntBASIC-1.91□□□□□ -2.71
SNRNP200O75643 RNU6-598P-201ENST00000364017 105 ntBASIC-1.91□□□□□ -2.71
SNRNP200O75643 MIR579-201ENST00000385221 98 ntBASIC-1.91□□□□□ -2.71
SNRNP200O75643 RNU6-686P-201ENST00000364839 107 ntBASIC-1.91□□□□□ -2.72
SNRNP200O75643 Y_RNA.684-201ENST00000516510 99 ntBASIC-1.91□□□□□ -2.72
SNRNP200O75643 SNORD60.1-201ENST00000362451 73 ntBASIC-1.92□□□□□ -2.72
SNRNP200O75643 RNU6-118P-201ENST00000516552 102 ntBASIC-1.92□□□□□ -2.72
SNRNP200O75643 AP001318.4-201ENST00000616637 121 ntBASIC-1.92□□□□□ -2.72
SNRNP200O75643 SNORA27.2-201ENST00000363365 126 ntBASIC-1.93□□□□□ -2.72
SNRNP200O75643 RNU6-907P-201ENST00000390924 102 ntBASIC-1.93□□□□□ -2.72
SNRNP200O75643 MIR581-201ENST00000384895 96 ntBASIC-1.93□□□□□ -2.72
SNRNP200O75643 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.93□□□□□ -2.72
SNRNP200O75643 RNU6-255P-201ENST00000516957 105 ntBASIC-1.93□□□□□ -2.72
SNRNP200O75643 MIR4748-201ENST00000578076 82 ntBASIC-1.93□□□□□ -2.72
SNRNP200O75643 RNU6-361P-201ENST00000364454 107 ntBASIC-1.94□□□□□ -2.72
SNRNP200O75643 RNU6-675P-201ENST00000384236 104 ntBASIC-1.94□□□□□ -2.72
SNRNP200O75643 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.94□□□□□ -2.72
SNRNP200O75643 SNORD113-3-201ENST00000364830 72 ntBASIC-1.94□□□□□ -2.72
SNRNP200O75643 Y_RNA.611-201ENST00000410682 108 ntBASIC-1.94□□□□□ -2.72
SNRNP200O75643 RNU6-1325P-201ENST00000364905 105 ntBASIC-1.95□□□□□ -2.72
SNRNP200O75643 RNU6-979P-201ENST00000383896 107 ntBASIC-1.95□□□□□ -2.72
SNRNP200O75643 Y_RNA.647-201ENST00000459194 112 ntBASIC-1.95□□□□□ -2.72
SNRNP200O75643 Y_RNA.640-201ENST00000459296 112 ntBASIC-1.95□□□□□ -2.72
SNRNP200O75643 RNU6-589P-201ENST00000516485 107 ntBASIC-1.95□□□□□ -2.72
SNRNP200O75643 Y_RNA.803-201ENST00000614432 112 ntBASIC-1.95□□□□□ -2.72
SNRNP200O75643 Y_RNA.815-201ENST00000616655 112 ntBASIC-1.95□□□□□ -2.72
SNRNP200O75643 Y_RNA.795-201ENST00000619475 112 ntBASIC-1.95□□□□□ -2.72
SNRNP200O75643 Y_RNA.827-201ENST00000638104 112 ntBASIC-1.95□□□□□ -2.72
SNRNP200O75643 RNU6-668P-201ENST00000364180 107 ntBASIC-1.96□□□□□ -2.72
SNRNP200O75643 RNU6ATAC23P-201ENST00000408448 123 ntBASIC-1.96□□□□□ -2.72
SNRNP200O75643 SCARNA15.1-201ENST00000516384 125 ntBASIC-1.96□□□□□ -2.72
SNRNP200O75643 RNU6-267P-201ENST00000516714 103 ntBASIC-1.96□□□□□ -2.72
SNRNP200O75643 MIR4503-201ENST00000582187 83 ntBASIC-1.96□□□□□ -2.72
SNRNP200O75643 RNA5SP93-201ENST00000362525 114 ntBASIC-1.96□□□□□ -2.72
SNRNP200O75643 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.96□□□□□ -2.72
SNRNP200O75643 SNORD60-201ENST00000383903 83 ntBASIC-1.96□□□□□ -2.72
SNRNP200O75643 RNU6-886P-201ENST00000384319 105 ntBASIC-1.96□□□□□ -2.72
SNRNP200O75643 Y_RNA.225-201ENST00000364326 97 ntBASIC-1.97□□□□□ -2.72
SNRNP200O75643 RNU6-959P-201ENST00000384671 107 ntBASIC-1.97□□□□□ -2.72
SNRNP200O75643 SNORD54-201ENST00000459159 67 ntBASIC-1.97□□□□□ -2.72
SNRNP200O75643 SNORD116-14-201ENST00000383894 92 ntBASIC-1.97□□□□□ -2.73
SNRNP200O75643 SNORD116-17-201ENST00000383929 92 ntBASIC-1.97□□□□□ -2.73
SNRNP200O75643 SNORD116-15-201ENST00000384445 92 ntBASIC-1.97□□□□□ -2.73
SNRNP200O75643 SNORD116-19-201ENST00000384729 92 ntBASIC-1.97□□□□□ -2.73
SNRNP200O75643 RNU6-402P-201ENST00000410678 103 ntBASIC-1.97□□□□□ -2.73
SNRNP200O75643 AC097484.2-201ENST00000509147 251 ntBASIC-1.97□□□□□ -2.73
SNRNP200O75643 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.98□□□□□ -2.73
SNRNP200O75643 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.98□□□□□ -2.73
SNRNP200O75643 RNU6-70P-201ENST00000516438 60 ntBASIC-1.98□□□□□ -2.73
SNRNP200O75643 RNU6-68P-201ENST00000516576 104 ntBASIC-1.98□□□□□ -2.73
SNRNP200O75643 RNY4P9-201ENST00000363194 97 ntBASIC-1.99□□□□□ -2.73
SNRNP200O75643 AC093729.1-201ENST00000513074 128 ntBASIC-1.99□□□□□ -2.73
SNRNP200O75643 AL117351.2-201ENST00000513571 157 ntBASIC-1.99□□□□□ -2.73
SNRNP200O75643 RNU7-160P-201ENST00000516660 62 ntBASIC-1.99□□□□□ -2.73
SNRNP200O75643 MIR450A1-201ENST00000362262 91 ntBASIC-1.99□□□□□ -2.73
SNRNP200O75643 RNU6-172P-201ENST00000411000 93 ntBASIC-1.99□□□□□ -2.73
SNRNP200O75643 RNU6-109P-201ENST00000516364 107 ntBASIC-1.99□□□□□ -2.73
SNRNP200O75643 RNU6-184P-201ENST00000516514 107 ntBASIC-1.99□□□□□ -2.73
SNRNP200O75643 RNY1P5-201ENST00000383890 115 ntBASIC-2□□□□□ -2.73
SNRNP200O75643 SNX3P1Y-201ENST00000615757 176 ntBASIC-2□□□□□ -2.73
SNRNP200O75643 Y_RNA.204-201ENST00000364112 102 ntBASIC-2□□□□□ -2.73
SNRNP200O75643 AC008267.6-201ENST00000441664 139 ntBASIC-2□□□□□ -2.73
SNRNP200O75643 RNU6-92P-201ENST00000605893 104 ntBASIC-2□□□□□ -2.73
Retrieved 100 of 98,524 protein–RNA pairs in 223.2 ms