Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 RPS29P8-201ENST00000445109 171 ntBASIC-0.52□□□□□ -2.49
HDAC3O15379 RNU6-732P-201ENST00000516033 103 ntBASIC-0.52□□□□□ -2.49
HDAC3O15379 SNORD63.1-201ENST00000516178 80 ntBASIC-0.52□□□□□ -2.49
HDAC3O15379 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.52□□□□□ -2.49
HDAC3O15379 MIR4662A-201ENST00000637499 67 ntBASIC-0.52□□□□□ -2.49
HDAC3O15379 RNU6-598P-201ENST00000364017 105 ntBASIC-0.53□□□□□ -2.49
HDAC3O15379 SNORD116-16-201ENST00000384533 92 ntBASIC-0.53□□□□□ -2.49
HDAC3O15379 RNU6-542P-201ENST00000516405 103 ntBASIC-0.53□□□□□ -2.49
HDAC3O15379 RNU6-431P-201ENST00000383874 107 ntBASIC-0.54□□□□□ -2.5
HDAC3O15379 SNORA26.4-201ENST00000391188 123 ntBASIC-0.54□□□□□ -2.5
HDAC3O15379 SNORD19-201ENST00000391191 68 ntBASIC-0.54□□□□□ -2.5
HDAC3O15379 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.54□□□□□ -2.5
HDAC3O15379 RNU6-871P-201ENST00000516122 100 ntBASIC-0.54□□□□□ -2.5
HDAC3O15379 AP002795.1-201ENST00000534879 84 ntBASIC-0.54□□□□□ -2.5
HDAC3O15379 MIR4493-201ENST00000584016 73 ntBASIC-0.54□□□□□ -2.5
HDAC3O15379 MIR101-1-201ENST00000362265 75 ntBASIC-0.55□□□□□ -2.5
HDAC3O15379 SNORD114-25-201ENST00000363742 72 ntBASIC-0.55□□□□□ -2.5
HDAC3O15379 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.55□□□□□ -2.5
HDAC3O15379 AC005520.4-201ENST00000604337 90 ntBASIC-0.55□□□□□ -2.5
HDAC3O15379 U2.18-201ENST00000622185 84 ntBASIC-0.55□□□□□ -2.5
HDAC3O15379 U6.111-201ENST00000636093 83 ntBASIC-0.55□□□□□ -2.5
HDAC3O15379 SNORA25.4-201ENST00000363666 124 ntBASIC-0.56□□□□□ -2.5
HDAC3O15379 RNU6-649P-201ENST00000384463 107 ntBASIC-0.56□□□□□ -2.5
HDAC3O15379 MIR147A-201ENST00000385079 72 ntBASIC-0.56□□□□□ -2.5
HDAC3O15379 SNORD64-201ENST00000386683 67 ntBASIC-0.56□□□□□ -2.5
HDAC3O15379 SNORD1B-201ENST00000363091 84 ntBASIC-0.57□□□□□ -2.5
HDAC3O15379 RNU6-696P-201ENST00000390834 107 ntBASIC-0.57□□□□□ -2.5
HDAC3O15379 SNORD115-33-201ENST00000363723 82 ntBASIC-0.58□□□□□ -2.5
HDAC3O15379 RNU6-92P-201ENST00000605893 104 ntBASIC-0.58□□□□□ -2.5
HDAC3O15379 MIR429-201ENST00000362106 83 ntBASIC-0.59□□□□□ -2.5
HDAC3O15379 RNU6-35P-201ENST00000384530 107 ntBASIC-0.59□□□□□ -2.5
HDAC3O15379 SNORD57-201ENST00000448188 72 ntBASIC-0.59□□□□□ -2.5
HDAC3O15379 RNU6-638P-201ENST00000516582 104 ntBASIC-0.59□□□□□ -2.5
HDAC3O15379 RNU6-539P-201ENST00000516665 103 ntBASIC-0.59□□□□□ -2.5
HDAC3O15379 SNORD60.1-201ENST00000362451 73 ntBASIC-0.6□□□□□ -2.51
HDAC3O15379 RNA5SP451-201ENST00000410588 110 ntBASIC-0.6□□□□□ -2.51
HDAC3O15379 AL500527.2-201ENST00000454105 95 ntBASIC-0.6□□□□□ -2.51
HDAC3O15379 RNU6-800P-201ENST00000384473 103 ntBASIC-0.61□□□□□ -2.51
HDAC3O15379 AL353691.2-201ENST00000443795 59 ntBASIC-0.61□□□□□ -2.51
HDAC3O15379 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.61□□□□□ -2.51
HDAC3O15379 MIR382-201ENST00000637119 76 ntBASIC-0.61□□□□□ -2.51
HDAC3O15379 RNA5SP192-201ENST00000364404 120 ntBASIC-0.62□□□□□ -2.51
HDAC3O15379 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.62□□□□□ -2.51
HDAC3O15379 MIR604-201ENST00000384880 94 ntBASIC-0.62□□□□□ -2.51
HDAC3O15379 MIR548Q-201ENST00000408404 100 ntBASIC-0.62□□□□□ -2.51
HDAC3O15379 MIR5683-201ENST00000636514 76 ntBASIC-0.62□□□□□ -2.51
HDAC3O15379 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.63□□□□□ -2.51
HDAC3O15379 MIR4511-201ENST00000582784 87 ntBASIC-0.63□□□□□ -2.51
HDAC3O15379 SNORA25.5-201ENST00000363782 126 ntBASIC-0.64□□□□□ -2.51
HDAC3O15379 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.64□□□□□ -2.51
HDAC3O15379 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.64□□□□□ -2.51
HDAC3O15379 RNU6-172P-201ENST00000411000 93 ntBASIC-0.64□□□□□ -2.51
HDAC3O15379 RNU6-758P-201ENST00000516292 89 ntBASIC-0.64□□□□□ -2.51
HDAC3O15379 RNA5SP368-201ENST00000364298 116 ntBASIC-0.65□□□□□ -2.51
HDAC3O15379 MIR520D-201ENST00000385002 87 ntBASIC-0.65□□□□□ -2.51
HDAC3O15379 MIR579-201ENST00000385221 98 ntBASIC-0.65□□□□□ -2.51
HDAC3O15379 AC114801.3-201ENST00000510231 177 ntBASIC-0.65□□□□□ -2.51
HDAC3O15379 MIR507-201ENST00000385234 94 ntBASIC-0.66□□□□□ -2.52
HDAC3O15379 RPL35AP4-201ENST00000412007 102 ntBASIC-0.66□□□□□ -2.52
HDAC3O15379 RNU6-122P-201ENST00000516818 107 ntBASIC-0.66□□□□□ -2.52
HDAC3O15379 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.66□□□□□ -2.52
HDAC3O15379 RNA5SP26-201ENST00000362406 119 ntBASIC-0.67□□□□□ -2.52
HDAC3O15379 MIR548AA1-201ENST00000384971 97 ntBASIC-0.67□□□□□ -2.52
HDAC3O15379 MIR196A1-201ENST00000388006 70 ntBASIC-0.67□□□□□ -2.52
HDAC3O15379 RNU7-151P-201ENST00000516930 53 ntBASIC-0.67□□□□□ -2.52
HDAC3O15379 AC103706.3-201ENST00000636297 85 ntBASIC-0.67□□□□□ -2.52
HDAC3O15379 Z95118.1-201ENST00000421372 247 ntBASIC-0.68□□□□□ -2.52
HDAC3O15379 MIR3170-201ENST00000582699 77 ntBASIC-0.68□□□□□ -2.52
HDAC3O15379 MIR224-201ENST00000384889 81 ntBASIC-0.69□□□□□ -2.52
HDAC3O15379 MIR1265-201ENST00000408444 86 ntBASIC-0.69□□□□□ -2.52
HDAC3O15379 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.69□□□□□ -2.52
HDAC3O15379 RNU6-231P-201ENST00000517122 103 ntBASIC-0.69□□□□□ -2.52
HDAC3O15379 snoU83B.1-201ENST00000517136 88 ntBASIC-0.69□□□□□ -2.52
HDAC3O15379 MIR7978-201ENST00000636158 59 ntBASIC-0.69□□□□□ -2.52
HDAC3O15379 RNU6-608P-201ENST00000383927 104 ntBASIC-0.7□□□□□ -2.52
HDAC3O15379 RNU7-134P-201ENST00000458997 64 ntBASIC-0.7□□□□□ -2.52
HDAC3O15379 MIR4490-201ENST00000582647 84 ntBASIC-0.7□□□□□ -2.52
HDAC3O15379 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.7□□□□□ -2.52
HDAC3O15379 RNU6-258P-201ENST00000390884 101 ntBASIC-0.71□□□□□ -2.52
HDAC3O15379 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.71□□□□□ -2.52
HDAC3O15379 SNORD95.1-201ENST00000364099 68 ntBASIC-0.72□□□□□ -2.52
HDAC3O15379 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.72□□□□□ -2.52
HDAC3O15379 AC110620.1-201ENST00000416042 228 ntBASIC-0.72□□□□□ -2.52
HDAC3O15379 MIR4499-201ENST00000584834 69 ntBASIC-0.72□□□□□ -2.52
HDAC3O15379 MIR6818-201ENST00000621576 65 ntBASIC-0.72□□□□□ -2.52
HDAC3O15379 RNU6-810P-201ENST00000364001 107 ntBASIC-0.73□□□□□ -2.53
HDAC3O15379 MIR29B1-201ENST00000385015 81 ntBASIC-0.73□□□□□ -2.53
HDAC3O15379 SNORD116.2-201ENST00000391251 93 ntBASIC-0.73□□□□□ -2.53
HDAC3O15379 AC090616.4-201ENST00000448026 115 ntBASIC-0.73□□□□□ -2.53
HDAC3O15379 MIR7110-201ENST00000612638 86 ntBASIC-0.73□□□□□ -2.53
HDAC3O15379 uc_338.19-201ENST00000616808 99 ntBASIC-0.73□□□□□ -2.53
HDAC3O15379 RNU6-940P-201ENST00000363433 104 ntBASIC-0.74□□□□□ -2.53
HDAC3O15379 RNU6-471P-201ENST00000383944 106 ntBASIC-0.74□□□□□ -2.53
HDAC3O15379 MIR125B1-201ENST00000385236 88 ntBASIC-0.74□□□□□ -2.53
HDAC3O15379 SNORD83B-201ENST00000386745 93 ntBASIC-0.74□□□□□ -2.53
HDAC3O15379 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.74□□□□□ -2.53
HDAC3O15379 RNU6-995P-201ENST00000391244 107 ntBASIC-0.74□□□□□ -2.53
HDAC3O15379 RNA5SP25-201ENST00000410815 110 ntBASIC-0.74□□□□□ -2.53
HDAC3O15379 MIR3681-201ENST00000580089 72 ntBASIC-0.74□□□□□ -2.53
HDAC3O15379 MIR466-201ENST00000580653 84 ntBASIC-0.74□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms