Protein–RNA interactions for Protein: O00257

CBX4, E3 SUMO-protein ligase CBX4, humanhuman

Predictions only

Length 560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4O00257 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.36□□□□□ -2.47
CBX4O00257 RNU6-649P-201ENST00000384463 107 ntBASIC-0.36□□□□□ -2.47
CBX4O00257 MIR196A2-201ENST00000385189 110 ntBASIC-0.36□□□□□ -2.47
CBX4O00257 RNU6-630P-201ENST00000391258 106 ntBASIC-0.36□□□□□ -2.47
CBX4O00257 MIR3179-1-201ENST00000578940 84 ntBASIC-0.36□□□□□ -2.47
CBX4O00257 MIR3179-2-201ENST00000579107 84 ntBASIC-0.36□□□□□ -2.47
CBX4O00257 MIR3179-3-201ENST00000579566 84 ntBASIC-0.36□□□□□ -2.47
CBX4O00257 MIR3179-4-201ENST00000617599 84 ntBASIC-0.36□□□□□ -2.47
CBX4O00257 SNORD74.6-201ENST00000364796 70 ntBASIC-0.37□□□□□ -2.47
CBX4O00257 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.37□□□□□ -2.47
CBX4O00257 SNORD113-2-201ENST00000391082 72 ntBASIC-0.37□□□□□ -2.47
CBX4O00257 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.37□□□□□ -2.47
CBX4O00257 SNORD75.1-201ENST00000408373 60 ntBASIC-0.37□□□□□ -2.47
CBX4O00257 RNU6-284P-201ENST00000411105 106 ntBASIC-0.37□□□□□ -2.47
CBX4O00257 SNORA13-201ENST00000458790 133 ntBASIC-0.37□□□□□ -2.47
CBX4O00257 U6.111-201ENST00000636093 83 ntBASIC-0.37□□□□□ -2.47
CBX4O00257 SNORA25.4-201ENST00000363666 124 ntBASIC-0.38□□□□□ -2.47
CBX4O00257 MIR527-201ENST00000385244 85 ntBASIC-0.38□□□□□ -2.47
CBX4O00257 RNU6-721P-201ENST00000410155 105 ntBASIC-0.38□□□□□ -2.47
CBX4O00257 RNU6-542P-201ENST00000516405 103 ntBASIC-0.38□□□□□ -2.47
CBX4O00257 RNU6-539P-201ENST00000516665 103 ntBASIC-0.38□□□□□ -2.47
CBX4O00257 AC005520.4-201ENST00000604337 90 ntBASIC-0.38□□□□□ -2.47
CBX4O00257 RNU6-458P-201ENST00000384179 107 ntBASIC-0.39□□□□□ -2.47
CBX4O00257 SNORA32.3-201ENST00000384772 121 ntBASIC-0.39□□□□□ -2.47
CBX4O00257 SNORD18.2-201ENST00000459604 70 ntBASIC-0.39□□□□□ -2.47
CBX4O00257 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.39□□□□□ -2.47
CBX4O00257 U6.58-201ENST00000613107 107 ntBASIC-0.39□□□□□ -2.47
CBX4O00257 RNU6-924P-201ENST00000362926 108 ntBASIC-0.4□□□□□ -2.47
CBX4O00257 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.4□□□□□ -2.47
CBX4O00257 SNORA41B-201ENST00000384785 128 ntBASIC-0.4□□□□□ -2.47
CBX4O00257 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.4□□□□□ -2.47
CBX4O00257 AP000533.3-201ENST00000447704 118 ntBASIC-0.4□□□□□ -2.47
CBX4O00257 MIR548AZ-201ENST00000616567 95 ntBASIC-0.4□□□□□ -2.47
CBX4O00257 SNORD114-14-201ENST00000362723 75 ntBASIC-0.41□□□□□ -2.48
CBX4O00257 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.41□□□□□ -2.48
CBX4O00257 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.41□□□□□ -2.48
CBX4O00257 SNORA3B-201ENST00000391305 131 ntBASIC-0.41□□□□□ -2.48
CBX4O00257 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.41□□□□□ -2.48
CBX4O00257 AC021146.6-201ENST00000514659 117 ntBASIC-0.41□□□□□ -2.48
CBX4O00257 U7.5-201ENST00000517224 61 ntBASIC-0.41□□□□□ -2.48
CBX4O00257 MIR4436A-201ENST00000585278 85 ntBASIC-0.41□□□□□ -2.48
CBX4O00257 SNORD116-16-201ENST00000384533 92 ntBASIC-0.42□□□□□ -2.48
CBX4O00257 RNU7-88P-201ENST00000458752 63 ntBASIC-0.42□□□□□ -2.48
CBX4O00257 RNU6-800P-201ENST00000384473 103 ntBASIC-0.43□□□□□ -2.48
CBX4O00257 MT-TQ-201ENST00000387372 72 ntBASIC-0.43□□□□□ -2.48
CBX4O00257 AC114801.3-201ENST00000510231 177 ntBASIC-0.43□□□□□ -2.48
CBX4O00257 MIR3681-201ENST00000580089 72 ntBASIC-0.44□□□□□ -2.48
CBX4O00257 RNU6-92P-201ENST00000605893 104 ntBASIC-0.44□□□□□ -2.48
CBX4O00257 MIR429-201ENST00000362106 83 ntBASIC-0.45□□□□□ -2.48
CBX4O00257 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.45□□□□□ -2.48
CBX4O00257 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.45□□□□□ -2.48
CBX4O00257 MIR601-201ENST00000385256 79 ntBASIC-0.45□□□□□ -2.48
CBX4O00257 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.45□□□□□ -2.48
CBX4O00257 RNU6-732P-201ENST00000516033 103 ntBASIC-0.45□□□□□ -2.48
CBX4O00257 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.45□□□□□ -2.48
CBX4O00257 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.45□□□□□ -2.48
CBX4O00257 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.46□□□□□ -2.48
CBX4O00257 RNU6-598P-201ENST00000364017 105 ntBASIC-0.46□□□□□ -2.48
CBX4O00257 SNORD114-17-201ENST00000364699 75 ntBASIC-0.46□□□□□ -2.48
CBX4O00257 Y_RNA.468-201ENST00000384298 102 ntBASIC-0.46□□□□□ -2.48
CBX4O00257 MIR4511-201ENST00000582784 87 ntBASIC-0.46□□□□□ -2.48
CBX4O00257 SNORD60.1-201ENST00000362451 73 ntBASIC-0.47□□□□□ -2.48
CBX4O00257 SNORD1B-201ENST00000363091 84 ntBASIC-0.48□□□□□ -2.49
CBX4O00257 RNU6-696P-201ENST00000390834 107 ntBASIC-0.48□□□□□ -2.49
CBX4O00257 SNORA26.4-201ENST00000391188 123 ntBASIC-0.48□□□□□ -2.49
CBX4O00257 U4.2-201ENST00000618561 85 ntBASIC-0.48□□□□□ -2.49
CBX4O00257 U2.18-201ENST00000622185 84 ntBASIC-0.48□□□□□ -2.49
CBX4O00257 AC103706.3-201ENST00000636297 85 ntBASIC-0.48□□□□□ -2.49
CBX4O00257 SNORA25.5-201ENST00000363782 126 ntBASIC-0.49□□□□□ -2.49
CBX4O00257 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.49□□□□□ -2.49
CBX4O00257 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.49□□□□□ -2.49
CBX4O00257 MIR198-201ENST00000637333 62 ntBASIC-0.49□□□□□ -2.49
CBX4O00257 RNA5SP192-201ENST00000364404 120 ntBASIC-0.5□□□□□ -2.49
CBX4O00257 MIR587-201ENST00000384845 96 ntBASIC-0.5□□□□□ -2.49
CBX4O00257 MIR4320-201ENST00000636981 65 ntBASIC-0.5□□□□□ -2.49
CBX4O00257 SNORD19-201ENST00000391191 68 ntBASIC-0.51□□□□□ -2.49
CBX4O00257 SNORD63.1-201ENST00000516178 80 ntBASIC-0.51□□□□□ -2.49
CBX4O00257 RNU6-122P-201ENST00000516818 107 ntBASIC-0.51□□□□□ -2.49
CBX4O00257 SNORD115-33-201ENST00000363723 82 ntBASIC-0.52□□□□□ -2.49
CBX4O00257 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.53□□□□□ -2.49
CBX4O00257 AP002795.1-201ENST00000534879 84 ntBASIC-0.53□□□□□ -2.49
CBX4O00257 RNU6-431P-201ENST00000383874 107 ntBASIC-0.54□□□□□ -2.5
CBX4O00257 RNU6-471P-201ENST00000383944 106 ntBASIC-0.54□□□□□ -2.5
CBX4O00257 Y_RNA.413-201ENST00000384007 102 ntBASIC-0.55□□□□□ -2.5
CBX4O00257 MIR147A-201ENST00000385079 72 ntBASIC-0.55□□□□□ -2.5
CBX4O00257 RNU6-172P-201ENST00000411000 93 ntBASIC-0.55□□□□□ -2.5
CBX4O00257 AL353691.2-201ENST00000443795 59 ntBASIC-0.55□□□□□ -2.5
CBX4O00257 Y_RNA.754-201ENST00000476024 102 ntBASIC-0.55□□□□□ -2.5
CBX4O00257 Y_RNA.790-201ENST00000614282 102 ntBASIC-0.55□□□□□ -2.5
CBX4O00257 Y_RNA.782-201ENST00000614695 102 ntBASIC-0.55□□□□□ -2.5
CBX4O00257 MIR1207-201ENST00000408249 87 ntBASIC-0.56□□□□□ -2.5
CBX4O00257 AC110620.1-201ENST00000416042 228 ntBASIC-0.56□□□□□ -2.5
CBX4O00257 SNORD64-201ENST00000386683 67 ntBASIC-0.57□□□□□ -2.5
CBX4O00257 MIR548Q-201ENST00000408404 100 ntBASIC-0.57□□□□□ -2.5
CBX4O00257 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.57□□□□□ -2.5
CBX4O00257 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-0.57□□□□□ -2.5
CBX4O00257 RNU6-940P-201ENST00000363433 104 ntBASIC-0.58□□□□□ -2.5
CBX4O00257 SNORD114-25-201ENST00000363742 72 ntBASIC-0.58□□□□□ -2.5
CBX4O00257 RNU6-669P-201ENST00000365575 107 ntBASIC-0.58□□□□□ -2.5
CBX4O00257 MIR548AA1-201ENST00000384971 97 ntBASIC-0.58□□□□□ -2.5
Retrieved 100 of 98,524 protein–RNA pairs in 167.5 ms