Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 SNORD57-201ENST00000448188 72 ntBASIC-0.03□□□□□ -2.41
SHISA3A0PJX4 SNORD74.6-201ENST00000364796 70 ntBASIC-0.04□□□□□ -2.42
SHISA3A0PJX4 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.04□□□□□ -2.42
SHISA3A0PJX4 MIR3666-201ENST00000607845 111 ntBASIC-0.04□□□□□ -2.42
SHISA3A0PJX4 AL590491.3-201ENST00000610731 82 ntBASIC-0.04□□□□□ -2.42
SHISA3A0PJX4 SNORD114-12-201ENST00000365400 75 ntBASIC-0.05□□□□□ -2.42
SHISA3A0PJX4 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.05□□□□□ -2.42
SHISA3A0PJX4 MIR124-2-201ENST00000385081 109 ntBASIC-0.05□□□□□ -2.42
SHISA3A0PJX4 RNU6-995P-201ENST00000391244 107 ntBASIC-0.05□□□□□ -2.42
SHISA3A0PJX4 RNU6-141P-201ENST00000410499 105 ntBASIC-0.05□□□□□ -2.42
SHISA3A0PJX4 RNU7-88P-201ENST00000458752 63 ntBASIC-0.05□□□□□ -2.42
SHISA3A0PJX4 SNORD63.1-201ENST00000516178 80 ntBASIC-0.05□□□□□ -2.42
SHISA3A0PJX4 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.05□□□□□ -2.42
SHISA3A0PJX4 AC093726.3-201ENST00000637588 150 ntBASIC-0.05□□□□□ -2.42
SHISA3A0PJX4 RNA5SP285-201ENST00000516619 119 ntBASIC-0.06□□□□□ -2.42
SHISA3A0PJX4 Y_RNA.722-201ENST00000517279 114 ntBASIC-0.06□□□□□ -2.42
SHISA3A0PJX4 MIR329-2-201ENST00000385029 84 ntBASIC-0.07□□□□□ -2.42
SHISA3A0PJX4 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.07□□□□□ -2.42
SHISA3A0PJX4 RNU6-808P-201ENST00000391233 108 ntBASIC-0.07□□□□□ -2.42
SHISA3A0PJX4 RNU7-151P-201ENST00000516930 53 ntBASIC-0.07□□□□□ -2.42
SHISA3A0PJX4 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.09□□□□□ -2.42
SHISA3A0PJX4 SNORD4A-201ENST00000459174 72 ntBASIC-0.09□□□□□ -2.42
SHISA3A0PJX4 RNU6-732P-201ENST00000516033 103 ntBASIC-0.09□□□□□ -2.42
SHISA3A0PJX4 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.09□□□□□ -2.42
SHISA3A0PJX4 MIR7978-201ENST00000636158 59 ntBASIC-0.09□□□□□ -2.42
SHISA3A0PJX4 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.1□□□□□ -2.43
SHISA3A0PJX4 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-0.1□□□□□ -2.43
SHISA3A0PJX4 SNORA13-201ENST00000458790 133 ntBASIC-0.1□□□□□ -2.43
SHISA3A0PJX4 SNORD38.3-201ENST00000516599 73 ntBASIC-0.1□□□□□ -2.43
SHISA3A0PJX4 MIR518B-201ENST00000385127 83 ntBASIC-0.11□□□□□ -2.43
SHISA3A0PJX4 MIR579-201ENST00000385221 98 ntBASIC-0.11□□□□□ -2.43
SHISA3A0PJX4 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.11□□□□□ -2.43
SHISA3A0PJX4 MIR4490-201ENST00000582647 84 ntBASIC-0.11□□□□□ -2.43
SHISA3A0PJX4 RNU6-936P-201ENST00000384005 107 ntBASIC-0.12□□□□□ -2.43
SHISA3A0PJX4 MIR125B1-201ENST00000385236 88 ntBASIC-0.13□□□□□ -2.43
SHISA3A0PJX4 RNU6-1267P-201ENST00000410747 107 ntBASIC-0.13□□□□□ -2.43
SHISA3A0PJX4 RNU6-1206P-201ENST00000516339 103 ntBASIC-0.13□□□□□ -2.43
SHISA3A0PJX4 Y_RNA.69-201ENST00000362885 109 ntBASIC-0.14□□□□□ -2.43
SHISA3A0PJX4 SNORA32.1-201ENST00000364514 115 ntBASIC-0.14□□□□□ -2.43
SHISA3A0PJX4 RNA5SP300-201ENST00000391197 107 ntBASIC-0.14□□□□□ -2.43
SHISA3A0PJX4 MIR548X-201ENST00000580069 75 ntBASIC-0.14□□□□□ -2.43
SHISA3A0PJX4 RNU6-828P-201ENST00000364876 107 ntBASIC-0.15□□□□□ -2.43
SHISA3A0PJX4 SNORD18.2-201ENST00000459604 70 ntBASIC-0.15□□□□□ -2.43
SHISA3A0PJX4 MIR4788-201ENST00000639104 80 ntBASIC-0.15□□□□□ -2.43
SHISA3A0PJX4 MIR204-201ENST00000385200 110 ntBASIC-0.17□□□□□ -2.44
SHISA3A0PJX4 RNU6-419P-201ENST00000517030 63 ntBASIC-0.17□□□□□ -2.44
SHISA3A0PJX4 MIR6759-201ENST00000638110 65 ntBASIC-0.17□□□□□ -2.44
SHISA3A0PJX4 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.18□□□□□ -2.44
SHISA3A0PJX4 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.18□□□□□ -2.44
SHISA3A0PJX4 SNORD75.1-201ENST00000408373 60 ntBASIC-0.18□□□□□ -2.44
SHISA3A0PJX4 SNORD22.1-201ENST00000516331 125 ntBASIC-0.18□□□□□ -2.44
SHISA3A0PJX4 RNU6-980P-201ENST00000516925 103 ntBASIC-0.18□□□□□ -2.44
SHISA3A0PJX4 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.19□□□□□ -2.44
SHISA3A0PJX4 IGLVI-20-201ENST00000519296 130 ntBASIC-0.19□□□□□ -2.44
SHISA3A0PJX4 RNU6-1111P-201ENST00000391118 107 ntBASIC-0.2□□□□□ -2.44
SHISA3A0PJX4 SNORA26.4-201ENST00000391188 123 ntBASIC-0.2□□□□□ -2.44
SHISA3A0PJX4 MIR3170-201ENST00000582699 77 ntBASIC-0.2□□□□□ -2.44
SHISA3A0PJX4 Y_RNA.379-201ENST00000365653 102 ntBASIC-0.21□□□□□ -2.44
SHISA3A0PJX4 SNORD114-31-201ENST00000363219 75 ntBASIC-0.22□□□□□ -2.44
SHISA3A0PJX4 RNU4-33P-201ENST00000364316 85 ntBASIC-0.22□□□□□ -2.44
SHISA3A0PJX4 MIR3179-1-201ENST00000578940 84 ntBASIC-0.22□□□□□ -2.44
SHISA3A0PJX4 MIR3179-2-201ENST00000579107 84 ntBASIC-0.22□□□□□ -2.44
SHISA3A0PJX4 MIR3179-3-201ENST00000579566 84 ntBASIC-0.22□□□□□ -2.44
SHISA3A0PJX4 MIR3179-4-201ENST00000617599 84 ntBASIC-0.22□□□□□ -2.44
SHISA3A0PJX4 SNORD115-33-201ENST00000363723 82 ntBASIC-0.23□□□□□ -2.45
SHISA3A0PJX4 MIR548Q-201ENST00000408404 100 ntBASIC-0.23□□□□□ -2.45
SHISA3A0PJX4 RNU6-247P-201ENST00000362636 107 ntBASIC-0.24□□□□□ -2.45
SHISA3A0PJX4 SNORD114-11-201ENST00000363738 75 ntBASIC-0.24□□□□□ -2.45
SHISA3A0PJX4 Y_RNA.321-201ENST00000365149 102 ntBASIC-0.24□□□□□ -2.45
SHISA3A0PJX4 MIR214-201ENST00000385214 110 ntBASIC-0.24□□□□□ -2.45
SHISA3A0PJX4 SNORD19-201ENST00000391191 68 ntBASIC-0.24□□□□□ -2.45
SHISA3A0PJX4 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.25□□□□□ -2.45
SHISA3A0PJX4 RNU6-35P-201ENST00000384530 107 ntBASIC-0.25□□□□□ -2.45
SHISA3A0PJX4 AL353691.2-201ENST00000443795 59 ntBASIC-0.25□□□□□ -2.45
SHISA3A0PJX4 MIR5589-201ENST00000579442 60 ntBASIC-0.25□□□□□ -2.45
SHISA3A0PJX4 MTRNR2L9-201ENST00000622562 75 ntBASIC-0.25□□□□□ -2.45
SHISA3A0PJX4 Y_RNA.139-201ENST00000363464 102 ntBASIC-0.26□□□□□ -2.45
SHISA3A0PJX4 SNORD45.2-201ENST00000363552 72 ntBASIC-0.27□□□□□ -2.45
SHISA3A0PJX4 AL451105.1-201ENST00000450005 189 ntBASIC-0.27□□□□□ -2.45
SHISA3A0PJX4 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.28□□□□□ -2.45
SHISA3A0PJX4 AP000533.3-201ENST00000447704 118 ntBASIC-0.28□□□□□ -2.45
SHISA3A0PJX4 RNA5SP169-201ENST00000517268 117 ntBASIC-0.28□□□□□ -2.45
SHISA3A0PJX4 AC021146.6-201ENST00000514659 117 ntBASIC-0.29□□□□□ -2.46
SHISA3A0PJX4 SNORD63.2-201ENST00000516303 64 ntBASIC-0.29□□□□□ -2.46
SHISA3A0PJX4 RNU6-320P-201ENST00000516511 106 ntBASIC-0.29□□□□□ -2.46
SHISA3A0PJX4 MIR4636-201ENST00000582271 80 ntBASIC-0.29□□□□□ -2.46
SHISA3A0PJX4 SNORD14C-201ENST00000365382 88 ntBASIC-0.3□□□□□ -2.46
SHISA3A0PJX4 MIR4802-201ENST00000581881 80 ntBASIC-0.3□□□□□ -2.46
SHISA3A0PJX4 MIR4645-201ENST00000583158 77 ntBASIC-0.3□□□□□ -2.46
SHISA3A0PJX4 MIR5683-201ENST00000636514 76 ntBASIC-0.3□□□□□ -2.46
SHISA3A0PJX4 RNU6-753P-201ENST00000363926 107 ntBASIC-0.31□□□□□ -2.46
SHISA3A0PJX4 SNORD114-17-201ENST00000364699 75 ntBASIC-0.31□□□□□ -2.46
SHISA3A0PJX4 SNORD126-201ENST00000459475 77 ntBASIC-0.32□□□□□ -2.46
SHISA3A0PJX4 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.32□□□□□ -2.46
SHISA3A0PJX4 RNA5SP275-201ENST00000363936 118 ntBASIC-0.33□□□□□ -2.46
SHISA3A0PJX4 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.33□□□□□ -2.46
SHISA3A0PJX4 RNU6-721P-201ENST00000410155 105 ntBASIC-0.33□□□□□ -2.46
SHISA3A0PJX4 AP001180.6-201ENST00000584918 159 ntBASIC-0.33□□□□□ -2.46
SHISA3A0PJX4 MIR196A2-201ENST00000385189 110 ntBASIC-0.34□□□□□ -2.46
SHISA3A0PJX4 Y_RNA.699-201ENST00000516803 93 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 1197.9 ms