Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 RNU6-604P-201ENST00000390917 100 ntBASIC-2.15□□□□□ -2.75
VAPAQ9P0L0 SNORD113-2-201ENST00000391082 72 ntBASIC-2.15□□□□□ -2.75
VAPAQ9P0L0 RNU6-772P-201ENST00000516042 105 ntBASIC-2.15□□□□□ -2.75
VAPAQ9P0L0 RNU6-537P-201ENST00000517277 103 ntBASIC-2.15□□□□□ -2.75
VAPAQ9P0L0 Y_RNA.190-201ENST00000363964 101 ntBASIC-2.16□□□□□ -2.76
VAPAQ9P0L0 RNU6-867P-201ENST00000364956 107 ntBASIC-2.16□□□□□ -2.76
VAPAQ9P0L0 Y_RNA.307-201ENST00000365022 117 ntBASIC-2.16□□□□□ -2.76
VAPAQ9P0L0 RNU6-574P-201ENST00000384265 107 ntBASIC-2.16□□□□□ -2.76
VAPAQ9P0L0 Y_RNA.649-201ENST00000459077 103 ntBASIC-2.16□□□□□ -2.76
VAPAQ9P0L0 RNU6-162P-201ENST00000516228 103 ntBASIC-2.16□□□□□ -2.76
VAPAQ9P0L0 SNORD63.2-201ENST00000516303 64 ntBASIC-2.16□□□□□ -2.76
VAPAQ9P0L0 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.16□□□□□ -2.76
VAPAQ9P0L0 AL157777.2-201ENST00000258070 137 ntBASIC-2.17□□□□□ -2.76
VAPAQ9P0L0 SNORD1B-201ENST00000363091 84 ntBASIC-2.17□□□□□ -2.76
VAPAQ9P0L0 MT-TM-201ENST00000387377 68 ntBASIC-2.17□□□□□ -2.76
VAPAQ9P0L0 Y_RNA.580-201ENST00000391004 95 ntBASIC-2.17□□□□□ -2.76
VAPAQ9P0L0 RNU7-61P-201ENST00000515897 61 ntBASIC-2.17□□□□□ -2.76
VAPAQ9P0L0 SCARNA23-201ENST00000516060 130 ntBASIC-2.17□□□□□ -2.76
VAPAQ9P0L0 SNORD116-10-201ENST00000363791 102 ntBASIC-2.18□□□□□ -2.76
VAPAQ9P0L0 SNORA41B-201ENST00000384785 128 ntBASIC-2.18□□□□□ -2.76
VAPAQ9P0L0 RNU7-120P-201ENST00000459334 63 ntBASIC-2.18□□□□□ -2.76
VAPAQ9P0L0 RNU6-797P-201ENST00000363101 109 ntBASIC-2.19□□□□□ -2.76
VAPAQ9P0L0 RNU6-669P-201ENST00000365575 107 ntBASIC-2.19□□□□□ -2.76
VAPAQ9P0L0 RNU6-974P-201ENST00000384099 108 ntBASIC-2.19□□□□□ -2.76
VAPAQ9P0L0 RNU7-151P-201ENST00000516930 53 ntBASIC-2.19□□□□□ -2.76
VAPAQ9P0L0 RNU6-1306P-201ENST00000365219 99 ntBASIC-2.2□□□□□ -2.76
VAPAQ9P0L0 SNORD116-16-201ENST00000384533 92 ntBASIC-2.2□□□□□ -2.76
VAPAQ9P0L0 MIR569-201ENST00000385228 96 ntBASIC-2.2□□□□□ -2.76
VAPAQ9P0L0 RNU7-107P-201ENST00000459121 61 ntBASIC-2.2□□□□□ -2.76
VAPAQ9P0L0 MIR3675-201ENST00000583661 73 ntBASIC-2.2□□□□□ -2.76
VAPAQ9P0L0 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.2□□□□□ -2.76
VAPAQ9P0L0 SNORD45.1-201ENST00000363181 77 ntBASIC-2.21□□□□□ -2.76
VAPAQ9P0L0 Y_RNA.398-201ENST00000383952 99 ntBASIC-2.21□□□□□ -2.76
VAPAQ9P0L0 RNU6-1247P-201ENST00000516622 98 ntBASIC-2.21□□□□□ -2.76
VAPAQ9P0L0 MIR466-201ENST00000580653 84 ntBASIC-2.21□□□□□ -2.76
VAPAQ9P0L0 RNU6-1094P-201ENST00000362416 104 ntBASIC-2.22□□□□□ -2.76
VAPAQ9P0L0 SNORA27.2-201ENST00000363365 126 ntBASIC-2.22□□□□□ -2.76
VAPAQ9P0L0 Y_RNA.257-201ENST00000364596 102 ntBASIC-2.22□□□□□ -2.76
VAPAQ9P0L0 RNU6-738P-201ENST00000384531 106 ntBASIC-2.22□□□□□ -2.76
VAPAQ9P0L0 RNU6-1064P-201ENST00000410626 104 ntBASIC-2.22□□□□□ -2.76
VAPAQ9P0L0 RNU6-904P-201ENST00000516206 101 ntBASIC-2.22□□□□□ -2.76
VAPAQ9P0L0 SNORA8.1-201ENST00000384250 140 ntBASIC-2.23□□□□□ -2.77
VAPAQ9P0L0 MIR581-201ENST00000384895 96 ntBASIC-2.23□□□□□ -2.77
VAPAQ9P0L0 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-2.23□□□□□ -2.77
VAPAQ9P0L0 SNORD33.1-201ENST00000516213 88 ntBASIC-2.23□□□□□ -2.77
VAPAQ9P0L0 TARS-215ENST00000626210 201 ntTSL 5 BASIC-2.23□□□□□ -2.77
VAPAQ9P0L0 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.24□□□□□ -2.77
VAPAQ9P0L0 MIR519C-201ENST00000385053 87 ntBASIC-2.24□□□□□ -2.77
VAPAQ9P0L0 RNU6-995P-201ENST00000391244 107 ntBASIC-2.24□□□□□ -2.77
VAPAQ9P0L0 MIR4748-201ENST00000578076 82 ntBASIC-2.24□□□□□ -2.77
VAPAQ9P0L0 Y_RNA.8-201ENST00000362353 102 ntBASIC-2.25□□□□□ -2.77
VAPAQ9P0L0 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.25□□□□□ -2.77
VAPAQ9P0L0 U7.3-201ENST00000616123 62 ntBASIC-2.25□□□□□ -2.77
VAPAQ9P0L0 MIR7978-201ENST00000636158 59 ntBASIC-2.25□□□□□ -2.77
VAPAQ9P0L0 Y_RNA.400-201ENST00000383963 111 ntBASIC-2.26□□□□□ -2.77
VAPAQ9P0L0 RNU6-804P-201ENST00000384286 107 ntBASIC-2.26□□□□□ -2.77
VAPAQ9P0L0 TRAJ33-201ENST00000390504 57 ntAPPRIS P1 BASIC-2.26□□□□□ -2.77
VAPAQ9P0L0 RNU6-394P-201ENST00000410735 107 ntBASIC-2.26□□□□□ -2.77
VAPAQ9P0L0 RNU6-426P-201ENST00000516464 97 ntBASIC-2.26□□□□□ -2.77
VAPAQ9P0L0 Y_RNA.501-201ENST00000384467 103 ntBASIC-2.27□□□□□ -2.77
VAPAQ9P0L0 MTND4LP9-201ENST00000427694 174 ntBASIC-2.27□□□□□ -2.77
VAPAQ9P0L0 RNU6-1211P-201ENST00000459179 105 ntBASIC-2.27□□□□□ -2.77
VAPAQ9P0L0 RNU6-523P-201ENST00000516304 54 ntBASIC-2.27□□□□□ -2.77
VAPAQ9P0L0 Y_RNA.812-201ENST00000610788 101 ntBASIC-2.27□□□□□ -2.77
VAPAQ9P0L0 Y_RNA.784-201ENST00000613803 101 ntBASIC-2.27□□□□□ -2.77
VAPAQ9P0L0 FTX_4.1-201ENST00000616291 147 ntBASIC-2.27□□□□□ -2.77
VAPAQ9P0L0 Y_RNA.787-201ENST00000616522 101 ntBASIC-2.27□□□□□ -2.77
VAPAQ9P0L0 Y_RNA.780-201ENST00000617336 101 ntBASIC-2.27□□□□□ -2.77
VAPAQ9P0L0 Y_RNA.801-201ENST00000619005 101 ntBASIC-2.27□□□□□ -2.77
VAPAQ9P0L0 MIRLET7A2-201ENST00000362105 72 ntBASIC-2.28□□□□□ -2.77
VAPAQ9P0L0 RNU6-119P-201ENST00000364882 107 ntBASIC-2.28□□□□□ -2.77
VAPAQ9P0L0 MIR590-201ENST00000385008 97 ntBASIC-2.28□□□□□ -2.77
VAPAQ9P0L0 AC097484.2-201ENST00000509147 251 ntBASIC-2.28□□□□□ -2.77
VAPAQ9P0L0 SNORA63-201ENST00000363450 132 ntBASIC-2.29□□□□□ -2.78
VAPAQ9P0L0 RNU6-172P-201ENST00000411000 93 ntBASIC-2.29□□□□□ -2.78
VAPAQ9P0L0 RNU6-109P-201ENST00000516364 107 ntBASIC-2.29□□□□□ -2.78
VAPAQ9P0L0 RNU6-184P-201ENST00000516514 107 ntBASIC-2.29□□□□□ -2.78
VAPAQ9P0L0 RNU6-624P-201ENST00000363411 107 ntBASIC-2.3□□□□□ -2.78
VAPAQ9P0L0 Y_RNA.532-201ENST00000384590 113 ntBASIC-2.3□□□□□ -2.78
VAPAQ9P0L0 MIR496-201ENST00000385226 102 ntBASIC-2.3□□□□□ -2.78
VAPAQ9P0L0 RNY4P18-201ENST00000391107 89 ntBASIC-2.3□□□□□ -2.78
VAPAQ9P0L0 SNORD18C-201ENST00000362704 69 ntBASIC-2.31□□□□□ -2.78
VAPAQ9P0L0 RNU6-1107P-201ENST00000364817 104 ntBASIC-2.31□□□□□ -2.78
VAPAQ9P0L0 Y_RNA.586-201ENST00000391146 98 ntBASIC-2.31□□□□□ -2.78
VAPAQ9P0L0 Y_RNA.647-201ENST00000459194 112 ntBASIC-2.31□□□□□ -2.78
VAPAQ9P0L0 Y_RNA.640-201ENST00000459296 112 ntBASIC-2.31□□□□□ -2.78
VAPAQ9P0L0 RNU6-303P-201ENST00000517091 106 ntBASIC-2.31□□□□□ -2.78
VAPAQ9P0L0 AC104211.3-201ENST00000518861 270 ntTSL 3 BASIC-2.31□□□□□ -2.78
VAPAQ9P0L0 MIR4484-201ENST00000582855 83 ntBASIC-2.31□□□□□ -2.78
VAPAQ9P0L0 Y_RNA.803-201ENST00000614432 112 ntBASIC-2.31□□□□□ -2.78
VAPAQ9P0L0 Y_RNA.815-201ENST00000616655 112 ntBASIC-2.31□□□□□ -2.78
VAPAQ9P0L0 Y_RNA.795-201ENST00000619475 112 ntBASIC-2.31□□□□□ -2.78
VAPAQ9P0L0 Y_RNA.827-201ENST00000638104 112 ntBASIC-2.31□□□□□ -2.78
VAPAQ9P0L0 Y_RNA.96-201ENST00000363092 109 ntBASIC-2.32□□□□□ -2.78
VAPAQ9P0L0 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.32□□□□□ -2.78
VAPAQ9P0L0 Y_RNA.193-201ENST00000363979 102 ntBASIC-2.32□□□□□ -2.78
VAPAQ9P0L0 Y_RNA.281-201ENST00000364774 94 ntBASIC-2.32□□□□□ -2.78
VAPAQ9P0L0 Y_RNA.475-201ENST00000384345 101 ntBASIC-2.32□□□□□ -2.78
VAPAQ9P0L0 Y_RNA.489-201ENST00000384410 101 ntBASIC-2.32□□□□□ -2.78
VAPAQ9P0L0 MIR125B1-201ENST00000385236 88 ntBASIC-2.32□□□□□ -2.78
Retrieved 100 of 98,524 protein–RNA pairs in 233.5 ms