Protein–RNA interactions for Protein: Q9NXZ2

DDX43, Probable ATP-dependent RNA helicase DDX43, humanhuman

Known RBP Predictions only

Length 648 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX43Q9NXZ2 AL391099.1-201ENST00000624635 187 ntBASIC-0.08□□□□□ -2.42
DDX43Q9NXZ2 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.09□□□□□ -2.42
DDX43Q9NXZ2 AL021921.1-201ENST00000442774 93 ntBASIC-0.09□□□□□ -2.42
DDX43Q9NXZ2 RNU6-518P-201ENST00000516056 96 ntBASIC-0.09□□□□□ -2.42
DDX43Q9NXZ2 RNU7-154P-201ENST00000516194 62 ntBASIC-0.09□□□□□ -2.42
DDX43Q9NXZ2 RNA5SP470-201ENST00000516463 106 ntBASIC-0.09□□□□□ -2.42
DDX43Q9NXZ2 MIR4432-201ENST00000581823 84 ntBASIC-0.09□□□□□ -2.42
DDX43Q9NXZ2 MIR4636-201ENST00000582271 80 ntBASIC-0.09□□□□□ -2.42
DDX43Q9NXZ2 U4.4-201ENST00000620626 117 ntBASIC-0.09□□□□□ -2.42
DDX43Q9NXZ2 SNORA18.1-201ENST00000363418 128 ntBASIC-0.1□□□□□ -2.43
DDX43Q9NXZ2 MIR4464-201ENST00000580818 92 ntBASIC-0.1□□□□□ -2.43
DDX43Q9NXZ2 AL353803.5-201ENST00000599815 141 ntBASIC-0.1□□□□□ -2.43
DDX43Q9NXZ2 MIR1295B-201ENST00000636144 60 ntBASIC-0.1□□□□□ -2.43
DDX43Q9NXZ2 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.11□□□□□ -2.43
DDX43Q9NXZ2 SNORD30.1-201ENST00000391309 70 ntBASIC-0.11□□□□□ -2.43
DDX43Q9NXZ2 AC114801.3-201ENST00000510231 177 ntBASIC-0.11□□□□□ -2.43
DDX43Q9NXZ2 RNU6-539P-201ENST00000516665 103 ntBASIC-0.11□□□□□ -2.43
DDX43Q9NXZ2 MIR4280-201ENST00000582178 76 ntBASIC-0.11□□□□□ -2.43
DDX43Q9NXZ2 AC005520.4-201ENST00000604337 90 ntBASIC-0.11□□□□□ -2.43
DDX43Q9NXZ2 uc_338.36-201ENST00000622331 158 ntBASIC-0.11□□□□□ -2.43
DDX43Q9NXZ2 U6.111-201ENST00000636093 83 ntBASIC-0.11□□□□□ -2.43
DDX43Q9NXZ2 RNU6-698P-201ENST00000363523 107 ntBASIC-0.12□□□□□ -2.43
DDX43Q9NXZ2 RNU6-34P-201ENST00000364874 107 ntBASIC-0.12□□□□□ -2.43
DDX43Q9NXZ2 RNU6-649P-201ENST00000384463 107 ntBASIC-0.12□□□□□ -2.43
DDX43Q9NXZ2 MIR517B-201ENST00000385102 67 ntBASIC-0.12□□□□□ -2.43
DDX43Q9NXZ2 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.12□□□□□ -2.43
DDX43Q9NXZ2 RNU6-630P-201ENST00000391258 106 ntBASIC-0.12□□□□□ -2.43
DDX43Q9NXZ2 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.12□□□□□ -2.43
DDX43Q9NXZ2 MIR5704-201ENST00000584029 77 ntBASIC-0.12□□□□□ -2.43
DDX43Q9NXZ2 MIR548V-201ENST00000584165 80 ntBASIC-0.12□□□□□ -2.43
DDX43Q9NXZ2 MIR8068-201ENST00000618032 68 ntBASIC-0.12□□□□□ -2.43
DDX43Q9NXZ2 snoU13.19-201ENST00000459148 104 ntBASIC-0.13□□□□□ -2.43
DDX43Q9NXZ2 AC114755.3-201ENST00000481111 251 ntBASIC-0.13□□□□□ -2.43
DDX43Q9NXZ2 SNORA25.4-201ENST00000363666 124 ntBASIC-0.14□□□□□ -2.43
DDX43Q9NXZ2 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.14□□□□□ -2.43
DDX43Q9NXZ2 SNORA32.1-201ENST00000364514 115 ntBASIC-0.14□□□□□ -2.43
DDX43Q9NXZ2 MIR548C-201ENST00000384815 97 ntBASIC-0.14□□□□□ -2.43
DDX43Q9NXZ2 SNORD4A-201ENST00000459174 72 ntBASIC-0.14□□□□□ -2.43
DDX43Q9NXZ2 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.14□□□□□ -2.43
DDX43Q9NXZ2 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.15□□□□□ -2.43
DDX43Q9NXZ2 SNORD114-12-201ENST00000365400 75 ntBASIC-0.15□□□□□ -2.43
DDX43Q9NXZ2 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.15□□□□□ -2.43
DDX43Q9NXZ2 MIR3666-201ENST00000607845 111 ntBASIC-0.15□□□□□ -2.43
DDX43Q9NXZ2 MIR6888-201ENST00000621977 67 ntBASIC-0.15□□□□□ -2.43
DDX43Q9NXZ2 snoR1.1-201ENST00000628177 80 ntBASIC-0.15□□□□□ -2.43
DDX43Q9NXZ2 RNU6-800P-201ENST00000384473 103 ntBASIC-0.16□□□□□ -2.44
DDX43Q9NXZ2 MIR630-201ENST00000384957 97 ntBASIC-0.16□□□□□ -2.44
DDX43Q9NXZ2 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.16□□□□□ -2.44
DDX43Q9NXZ2 RNU6-758P-201ENST00000516292 89 ntBASIC-0.16□□□□□ -2.44
DDX43Q9NXZ2 RNU6-542P-201ENST00000516405 103 ntBASIC-0.16□□□□□ -2.44
DDX43Q9NXZ2 AL445584.3-201ENST00000617173 78 ntBASIC-0.16□□□□□ -2.44
DDX43Q9NXZ2 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.17□□□□□ -2.44
DDX43Q9NXZ2 MIR214-201ENST00000385214 110 ntBASIC-0.17□□□□□ -2.44
DDX43Q9NXZ2 RNA5SP300-201ENST00000391197 107 ntBASIC-0.17□□□□□ -2.44
DDX43Q9NXZ2 MIR4802-201ENST00000581881 80 ntBASIC-0.17□□□□□ -2.44
DDX43Q9NXZ2 MIR4645-201ENST00000583158 77 ntBASIC-0.17□□□□□ -2.44
DDX43Q9NXZ2 MIR6854-201ENST00000614935 69 ntBASIC-0.17□□□□□ -2.44
DDX43Q9NXZ2 MIR6851-201ENST00000617060 67 ntBASIC-0.17□□□□□ -2.44
DDX43Q9NXZ2 SNORA62.4-201ENST00000365504 151 ntBASIC-0.18□□□□□ -2.44
DDX43Q9NXZ2 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.18□□□□□ -2.44
DDX43Q9NXZ2 RNA5SP66-201ENST00000517178 101 ntBASIC-0.18□□□□□ -2.44
DDX43Q9NXZ2 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.19□□□□□ -2.44
DDX43Q9NXZ2 RNU6-901P-201ENST00000384593 106 ntBASIC-0.19□□□□□ -2.44
DDX43Q9NXZ2 SNORD113-2-201ENST00000391082 72 ntBASIC-0.19□□□□□ -2.44
DDX43Q9NXZ2 MIR4511-201ENST00000582784 87 ntBASIC-0.19□□□□□ -2.44
DDX43Q9NXZ2 AP001180.6-201ENST00000584918 159 ntBASIC-0.19□□□□□ -2.44
DDX43Q9NXZ2 RNA5SP368-201ENST00000364298 116 ntBASIC-0.2□□□□□ -2.44
DDX43Q9NXZ2 RNU6-246P-201ENST00000384702 107 ntBASIC-0.2□□□□□ -2.44
DDX43Q9NXZ2 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
DDX43Q9NXZ2 AL445193.1-201ENST00000441183 141 ntBASIC-0.2□□□□□ -2.44
DDX43Q9NXZ2 MIR4263-201ENST00000584745 83 ntBASIC-0.2□□□□□ -2.44
DDX43Q9NXZ2 MIR8064-201ENST00000612863 90 ntBASIC-0.2□□□□□ -2.44
DDX43Q9NXZ2 SNORD114-11-201ENST00000363738 75 ntBASIC-0.21□□□□□ -2.44
DDX43Q9NXZ2 RNU6-30P-201ENST00000384561 107 ntBASIC-0.21□□□□□ -2.44
DDX43Q9NXZ2 AC139453.2-201ENST00000487255 133 ntBASIC-0.21□□□□□ -2.44
DDX43Q9NXZ2 SNORD38.3-201ENST00000516599 73 ntBASIC-0.21□□□□□ -2.44
DDX43Q9NXZ2 AC108676.2-201ENST00000605225 163 ntBASIC-0.21□□□□□ -2.44
DDX43Q9NXZ2 SNORD114-15-201ENST00000364687 72 ntBASIC-0.22□□□□□ -2.44
DDX43Q9NXZ2 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.22□□□□□ -2.44
DDX43Q9NXZ2 SNORA41B-201ENST00000384785 128 ntBASIC-0.22□□□□□ -2.44
DDX43Q9NXZ2 MIR604-201ENST00000384880 94 ntBASIC-0.22□□□□□ -2.44
DDX43Q9NXZ2 RNA5SP25-201ENST00000410815 110 ntBASIC-0.22□□□□□ -2.44
DDX43Q9NXZ2 AC103706.3-201ENST00000636297 85 ntBASIC-0.22□□□□□ -2.44
DDX43Q9NXZ2 MIR4788-201ENST00000639104 80 ntBASIC-0.22□□□□□ -2.44
DDX43Q9NXZ2 RNU6-471P-201ENST00000383944 106 ntBASIC-0.23□□□□□ -2.45
DDX43Q9NXZ2 MIR4493-201ENST00000584016 73 ntBASIC-0.23□□□□□ -2.45
DDX43Q9NXZ2 AC093726.3-201ENST00000637588 150 ntBASIC-0.23□□□□□ -2.45
DDX43Q9NXZ2 SNORD114-28-201ENST00000363610 72 ntBASIC-0.24□□□□□ -2.45
DDX43Q9NXZ2 RNA5SP169-201ENST00000517268 117 ntBASIC-0.24□□□□□ -2.45
DDX43Q9NXZ2 SNORD116-16-201ENST00000384533 92 ntBASIC-0.25□□□□□ -2.45
DDX43Q9NXZ2 RNU6-92P-201ENST00000605893 104 ntBASIC-0.25□□□□□ -2.45
DDX43Q9NXZ2 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.25□□□□□ -2.45
DDX43Q9NXZ2 SNORD60.1-201ENST00000362451 73 ntBASIC-0.26□□□□□ -2.45
DDX43Q9NXZ2 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.26□□□□□ -2.45
DDX43Q9NXZ2 SNORA25.5-201ENST00000363782 126 ntBASIC-0.26□□□□□ -2.45
DDX43Q9NXZ2 RNU6-590P-201ENST00000365039 107 ntBASIC-0.26□□□□□ -2.45
DDX43Q9NXZ2 RNU6-458P-201ENST00000384179 107 ntBASIC-0.26□□□□□ -2.45
DDX43Q9NXZ2 RNA5SP67-201ENST00000516422 131 ntBASIC-0.26□□□□□ -2.45
DDX43Q9NXZ2 U6.58-201ENST00000613107 107 ntBASIC-0.26□□□□□ -2.45
DDX43Q9NXZ2 MIR527-201ENST00000385244 85 ntBASIC-0.27□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 210.5 ms