Protein–RNA interactions for Protein: Q9H9Y2

RPF1, Ribosome production factor 1, humanhuman

Known RBP Predictions only

Length 349 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1Q9H9Y2 U2.7-201ENST00000619197 100 ntBASIC-1.12□□□□□ -2.59
RPF1Q9H9Y2 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.13□□□□□ -2.59
RPF1Q9H9Y2 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.13□□□□□ -2.59
RPF1Q9H9Y2 MIR147A-201ENST00000385079 72 ntBASIC-1.13□□□□□ -2.59
RPF1Q9H9Y2 SNORD64-201ENST00000386683 67 ntBASIC-1.13□□□□□ -2.59
RPF1Q9H9Y2 AC074348.1-201ENST00000426503 132 ntBASIC-1.13□□□□□ -2.59
RPF1Q9H9Y2 MIR3675-201ENST00000583661 73 ntBASIC-1.13□□□□□ -2.59
RPF1Q9H9Y2 RNU6-924P-201ENST00000362926 108 ntBASIC-1.14□□□□□ -2.59
RPF1Q9H9Y2 SNORA8.1-201ENST00000384250 140 ntBASIC-1.14□□□□□ -2.59
RPF1Q9H9Y2 RNU6-129P-201ENST00000391022 107 ntBASIC-1.14□□□□□ -2.59
RPF1Q9H9Y2 RNU6-168P-201ENST00000516189 101 ntBASIC-1.14□□□□□ -2.59
RPF1Q9H9Y2 MIR3115-201ENST00000577915 68 ntBASIC-1.14□□□□□ -2.59
RPF1Q9H9Y2 MIR548AG1-201ENST00000579932 66 ntBASIC-1.14□□□□□ -2.59
RPF1Q9H9Y2 MIR548AI-201ENST00000579940 88 ntBASIC-1.14□□□□□ -2.59
RPF1Q9H9Y2 AC006160.2-201ENST00000637708 154 ntBASIC-1.14□□□□□ -2.59
RPF1Q9H9Y2 RNA5SP192-201ENST00000364404 120 ntBASIC-1.15□□□□□ -2.59
RPF1Q9H9Y2 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.15□□□□□ -2.59
RPF1Q9H9Y2 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.15□□□□□ -2.59
RPF1Q9H9Y2 RNU6-49P-201ENST00000384256 107 ntBASIC-1.15□□□□□ -2.59
RPF1Q9H9Y2 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.15□□□□□ -2.59
RPF1Q9H9Y2 RNA5SP89-201ENST00000410300 108 ntBASIC-1.15□□□□□ -2.59
RPF1Q9H9Y2 U2.22-201ENST00000636441 106 ntBASIC-1.15□□□□□ -2.59
RPF1Q9H9Y2 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.16□□□□□ -2.6
RPF1Q9H9Y2 AL500527.2-201ENST00000454105 95 ntBASIC-1.16□□□□□ -2.6
RPF1Q9H9Y2 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.16□□□□□ -2.6
RPF1Q9H9Y2 AL627230.5-201ENST00000619807 58 ntBASIC-1.16□□□□□ -2.6
RPF1Q9H9Y2 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.17□□□□□ -2.6
RPF1Q9H9Y2 RNA5SP331-201ENST00000364986 107 ntBASIC-1.17□□□□□ -2.6
RPF1Q9H9Y2 MIR378F-201ENST00000578143 78 ntBASIC-1.18□□□□□ -2.6
RPF1Q9H9Y2 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.19□□□□□ -2.6
RPF1Q9H9Y2 RNU6-604P-201ENST00000390917 100 ntBASIC-1.19□□□□□ -2.6
RPF1Q9H9Y2 MIR4484-201ENST00000582855 83 ntBASIC-1.19□□□□□ -2.6
RPF1Q9H9Y2 SNX3P1X-201ENST00000414887 175 ntBASIC-1.2□□□□□ -2.6
RPF1Q9H9Y2 RNU6-982P-201ENST00000516216 102 ntBASIC-1.2□□□□□ -2.6
RPF1Q9H9Y2 RNU6-807P-201ENST00000516805 107 ntBASIC-1.2□□□□□ -2.6
RPF1Q9H9Y2 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.2□□□□□ -2.6
RPF1Q9H9Y2 MIR382-201ENST00000637119 76 ntBASIC-1.2□□□□□ -2.6
RPF1Q9H9Y2 MIR548C-201ENST00000384815 97 ntBASIC-1.21□□□□□ -2.6
RPF1Q9H9Y2 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.21□□□□□ -2.6
RPF1Q9H9Y2 SNORD45.1-201ENST00000363181 77 ntBASIC-1.22□□□□□ -2.6
RPF1Q9H9Y2 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.22□□□□□ -2.6
RPF1Q9H9Y2 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.22□□□□□ -2.6
RPF1Q9H9Y2 MIR3165-201ENST00000579874 75 ntBASIC-1.22□□□□□ -2.6
RPF1Q9H9Y2 IGLL4P-201ENST00000614590 133 ntBASIC-1.23□□□□□ -2.61
RPF1Q9H9Y2 RNY1P1-201ENST00000364372 112 ntBASIC-1.24□□□□□ -2.61
RPF1Q9H9Y2 RNU6-246P-201ENST00000384702 107 ntBASIC-1.24□□□□□ -2.61
RPF1Q9H9Y2 SNORA26.4-201ENST00000391188 123 ntBASIC-1.24□□□□□ -2.61
RPF1Q9H9Y2 SNORD63.1-201ENST00000516178 80 ntBASIC-1.24□□□□□ -2.61
RPF1Q9H9Y2 RNA5SP461-201ENST00000516451 104 ntBASIC-1.24□□□□□ -2.61
RPF1Q9H9Y2 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.25□□□□□ -2.61
RPF1Q9H9Y2 MIR5588-201ENST00000581890 63 ntBASIC-1.25□□□□□ -2.61
RPF1Q9H9Y2 MIR1297-201ENST00000637311 77 ntBASIC-1.25□□□□□ -2.61
RPF1Q9H9Y2 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.26□□□□□ -2.61
RPF1Q9H9Y2 SNORD115-33-201ENST00000363723 82 ntBASIC-1.26□□□□□ -2.61
RPF1Q9H9Y2 SNORD115-22-201ENST00000364456 82 ntBASIC-1.26□□□□□ -2.61
RPF1Q9H9Y2 MIR1468-201ENST00000410600 86 ntBASIC-1.26□□□□□ -2.61
RPF1Q9H9Y2 RNU7-174P-201ENST00000516248 59 ntBASIC-1.26□□□□□ -2.61
RPF1Q9H9Y2 MIR4306-201ENST00000583390 91 ntBASIC-1.26□□□□□ -2.61
RPF1Q9H9Y2 MIR4499-201ENST00000584834 69 ntBASIC-1.26□□□□□ -2.61
RPF1Q9H9Y2 MIR198-201ENST00000637333 62 ntBASIC-1.26□□□□□ -2.61
RPF1Q9H9Y2 RNU6-979P-201ENST00000383896 107 ntBASIC-1.27□□□□□ -2.61
RPF1Q9H9Y2 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.27□□□□□ -2.61
RPF1Q9H9Y2 MIR601-201ENST00000385256 79 ntBASIC-1.27□□□□□ -2.61
RPF1Q9H9Y2 RNY4P30-201ENST00000410216 95 ntBASIC-1.27□□□□□ -2.61
RPF1Q9H9Y2 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.27□□□□□ -2.61
RPF1Q9H9Y2 RNU6-153P-201ENST00000364422 104 ntBASIC-1.28□□□□□ -2.61
RPF1Q9H9Y2 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.28□□□□□ -2.61
RPF1Q9H9Y2 RNU7-88P-201ENST00000458752 63 ntBASIC-1.28□□□□□ -2.61
RPF1Q9H9Y2 U7.5-201ENST00000517224 61 ntBASIC-1.28□□□□□ -2.61
RPF1Q9H9Y2 snoU83B.1-201ENST00000517136 88 ntBASIC-1.29□□□□□ -2.62
RPF1Q9H9Y2 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.29□□□□□ -2.62
RPF1Q9H9Y2 uc_338.19-201ENST00000616808 99 ntBASIC-1.29□□□□□ -2.62
RPF1Q9H9Y2 RNU6-315P-201ENST00000362666 107 ntBASIC-1.3□□□□□ -2.62
RPF1Q9H9Y2 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.3□□□□□ -2.62
RPF1Q9H9Y2 RNU6-380P-201ENST00000410207 107 ntBASIC-1.3□□□□□ -2.62
RPF1Q9H9Y2 SCARNA18B-201ENST00000458806 135 ntBASIC-1.3□□□□□ -2.62
RPF1Q9H9Y2 RNA5SP180-201ENST00000516181 101 ntBASIC-1.3□□□□□ -2.62
RPF1Q9H9Y2 MIR664A-201ENST00000626086 82 ntBASIC-1.3□□□□□ -2.62
RPF1Q9H9Y2 RNU6-732P-201ENST00000516033 103 ntBASIC-1.31□□□□□ -2.62
RPF1Q9H9Y2 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.32□□□□□ -2.62
RPF1Q9H9Y2 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.34□□□□□ -2.62
RPF1Q9H9Y2 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.34□□□□□ -2.62
RPF1Q9H9Y2 RNU7-171P-201ENST00000459581 62 ntBASIC-1.34□□□□□ -2.62
RPF1Q9H9Y2 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.35□□□□□ -2.63
RPF1Q9H9Y2 SNORD19-201ENST00000391191 68 ntBASIC-1.35□□□□□ -2.63
RPF1Q9H9Y2 RNU6-587P-201ENST00000391282 106 ntBASIC-1.35□□□□□ -2.63
RPF1Q9H9Y2 AL353691.2-201ENST00000443795 59 ntBASIC-1.35□□□□□ -2.63
RPF1Q9H9Y2 SNORD113.1-201ENST00000363280 73 ntBASIC-1.36□□□□□ -2.63
RPF1Q9H9Y2 RNU6-458P-201ENST00000384179 107 ntBASIC-1.36□□□□□ -2.63
RPF1Q9H9Y2 SNORD45A-201ENST00000384512 84 ntBASIC-1.36□□□□□ -2.63
RPF1Q9H9Y2 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.36□□□□□ -2.63
RPF1Q9H9Y2 AP002795.1-201ENST00000534879 84 ntBASIC-1.36□□□□□ -2.63
RPF1Q9H9Y2 U6.58-201ENST00000613107 107 ntBASIC-1.36□□□□□ -2.63
RPF1Q9H9Y2 U4.4-201ENST00000620626 117 ntBASIC-1.36□□□□□ -2.63
RPF1Q9H9Y2 MIR494-201ENST00000349529 81 ntBASIC-1.37□□□□□ -2.63
RPF1Q9H9Y2 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.37□□□□□ -2.63
RPF1Q9H9Y2 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.37□□□□□ -2.63
RPF1Q9H9Y2 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.37□□□□□ -2.63
RPF1Q9H9Y2 MTND4LP1-201ENST00000446263 157 ntBASIC-1.37□□□□□ -2.63
RPF1Q9H9Y2 MIR8053-201ENST00000613344 75 ntBASIC-1.37□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 352.5 ms