Protein–RNA interactions for Protein: Q9H2S5

RNF39, RING finger protein 39, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF39Q9H2S5 RNU6-620P-201ENST00000384017 96 ntBASIC1.92□□□□□ -2.1
RNF39Q9H2S5 RNU6ATAC2P-201ENST00000387943 126 ntBASIC1.92□□□□□ -2.1
RNF39Q9H2S5 SNORA40.8-201ENST00000411034 126 ntBASIC1.92□□□□□ -2.1
RNF39Q9H2S5 SNORA25.15-201ENST00000516487 89 ntBASIC1.92□□□□□ -2.1
RNF39Q9H2S5 OR2A41P-201ENST00000473586 105 ntBASIC1.91□□□□□ -2.1
RNF39Q9H2S5 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.9□□□□□ -2.1
RNF39Q9H2S5 ATP13A3-201ENST00000256031 7322 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
RNF39Q9H2S5 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.9□□□□□ -2.1
RNF39Q9H2S5 ZDBF2-202ENST00000611847 9890 ntTSL 5 BASIC1.9□□□□□ -2.11
RNF39Q9H2S5 RNU6-695P-201ENST00000391157 104 ntBASIC1.9□□□□□ -2.11
RNF39Q9H2S5 SNORD71-201ENST00000411292 86 ntBASIC1.9□□□□□ -2.11
RNF39Q9H2S5 MIR4419B-201ENST00000577260 68 ntBASIC1.9□□□□□ -2.11
RNF39Q9H2S5 MIR499B-201ENST00000636498 73 ntBASIC1.9□□□□□ -2.11
RNF39Q9H2S5 SNORA67.5-201ENST00000391036 107 ntBASIC1.89□□□□□ -2.11
RNF39Q9H2S5 AL356379.1-201ENST00000414105 126 ntBASIC1.89□□□□□ -2.11
RNF39Q9H2S5 MIR23C-201ENST00000579846 100 ntBASIC1.89□□□□□ -2.11
RNF39Q9H2S5 MIR6840-201ENST00000611937 71 ntBASIC1.89□□□□□ -2.11
RNF39Q9H2S5 RNU6-455P-201ENST00000384681 107 ntBASIC1.88□□□□□ -2.11
RNF39Q9H2S5 AC108740.1-201ENST00000498629 225 ntBASIC1.88□□□□□ -2.11
RNF39Q9H2S5 MIR140-201ENST00000385282 100 ntBASIC1.87□□□□□ -2.11
RNF39Q9H2S5 AL096840.1-201ENST00000603287 93 ntBASIC1.87□□□□□ -2.11
RNF39Q9H2S5 SNORD115-33-201ENST00000363723 82 ntBASIC1.86□□□□□ -2.11
RNF39Q9H2S5 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC1.86□□□□□ -2.11
RNF39Q9H2S5 Y_RNA.603-201ENST00000410571 108 ntBASIC1.86□□□□□ -2.11
RNF39Q9H2S5 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.85□□□□□ -2.11
RNF39Q9H2S5 SNORD18C-201ENST00000362704 69 ntBASIC1.85□□□□□ -2.11
RNF39Q9H2S5 RNU7-129P-201ENST00000516128 62 ntBASIC1.85□□□□□ -2.11
RNF39Q9H2S5 MIR4255-201ENST00000579351 72 ntBASIC1.85□□□□□ -2.11
RNF39Q9H2S5 Y_RNA.118-201ENST00000363300 101 ntBASIC1.84□□□□□ -2.11
RNF39Q9H2S5 MIR656-201ENST00000385224 78 ntBASIC1.83□□□□□ -2.12
RNF39Q9H2S5 MIR151B-201ENST00000584249 96 ntBASIC1.83□□□□□ -2.12
RNF39Q9H2S5 MIAT_exon5_2.1-201ENST00000613562 85 ntBASIC1.83□□□□□ -2.12
RNF39Q9H2S5 RNU6-912P-201ENST00000363800 104 ntBASIC1.82□□□□□ -2.12
RNF39Q9H2S5 SNORD48-201ENST00000364953 64 ntBASIC1.82□□□□□ -2.12
RNF39Q9H2S5 RNU6-901P-201ENST00000384593 106 ntBASIC1.82□□□□□ -2.12
RNF39Q9H2S5 MIR499A-201ENST00000384903 122 ntBASIC1.82□□□□□ -2.12
RNF39Q9H2S5 AC114755.3-201ENST00000481111 251 ntBASIC1.82□□□□□ -2.12
RNF39Q9H2S5 MIR502-201ENST00000606349 86 ntBASIC1.82□□□□□ -2.12
RNF39Q9H2S5 TRMT112P2-201ENST00000512910 132 ntBASIC1.81□□□□□ -2.12
RNF39Q9H2S5 AC120024.2-201ENST00000576526 175 ntBASIC1.81□□□□□ -2.12
RNF39Q9H2S5 MIR8070-201ENST00000616510 88 ntBASIC1.81□□□□□ -2.12
RNF39Q9H2S5 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC1.8□□□□□ -2.12
RNF39Q9H2S5 MIR4448-201ENST00000584360 86 ntBASIC1.79□□□□□ -2.12
RNF39Q9H2S5 AP1B1P2-201ENST00000416196 106 ntBASIC1.78□□□□□ -2.12
RNF39Q9H2S5 MBNL3-212ENST00000538204 11294 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
RNF39Q9H2S5 RNA5SP364-201ENST00000516938 78 ntBASIC1.77□□□□□ -2.13
RNF39Q9H2S5 AL353765.1-201ENST00000605514 183 ntBASIC1.77□□□□□ -2.13
RNF39Q9H2S5 RNU1-93P-201ENST00000364704 169 ntBASIC1.76□□□□□ -2.13
RNF39Q9H2S5 RNU6-563P-201ENST00000364872 108 ntBASIC1.76□□□□□ -2.13
RNF39Q9H2S5 Y_RNA.355-201ENST00000365462 98 ntBASIC1.76□□□□□ -2.13
RNF39Q9H2S5 RNU6-284P-201ENST00000411105 106 ntBASIC1.76□□□□□ -2.13
RNF39Q9H2S5 SNORD18.2-201ENST00000459604 70 ntBASIC1.75□□□□□ -2.13
RNF39Q9H2S5 RNU1-42P-201ENST00000364033 160 ntBASIC1.74□□□□□ -2.13
RNF39Q9H2S5 uc_338.17-201ENST00000619633 179 ntBASIC1.73□□□□□ -2.13
RNF39Q9H2S5 SNORD56B-201ENST00000384713 71 ntBASIC1.72□□□□□ -2.13
RNF39Q9H2S5 MIR4285-201ENST00000581001 85 ntBASIC1.72□□□□□ -2.13
RNF39Q9H2S5 uc_338.20-201ENST00000621563 178 ntBASIC1.72□□□□□ -2.13
RNF39Q9H2S5 MIR507-201ENST00000385234 94 ntBASIC1.71□□□□□ -2.14
RNF39Q9H2S5 MIR1323-201ENST00000408090 73 ntBASIC1.71□□□□□ -2.14
RNF39Q9H2S5 RNU7-95P-201ENST00000459222 64 ntBASIC1.71□□□□□ -2.14
RNF39Q9H2S5 BX248123.2-201ENST00000606318 124 ntBASIC1.71□□□□□ -2.14
RNF39Q9H2S5 RNU6-1024P-201ENST00000384199 107 ntBASIC1.7□□□□□ -2.14
RNF39Q9H2S5 RNA5SP404-201ENST00000517118 132 ntBASIC1.7□□□□□ -2.14
RNF39Q9H2S5 RNU6-1340P-201ENST00000384438 107 ntBASIC1.69□□□□□ -2.14
RNF39Q9H2S5 SNORD53B-201ENST00000577887 78 ntBASIC1.69□□□□□ -2.14
RNF39Q9H2S5 MIR520E-201ENST00000384867 87 ntBASIC1.68□□□□□ -2.14
RNF39Q9H2S5 snoU13.18-201ENST00000459483 104 ntBASIC1.66□□□□□ -2.14
RNF39Q9H2S5 RNU6ATAC22P-201ENST00000516794 89 ntBASIC1.66□□□□□ -2.14
RNF39Q9H2S5 MIR6514-201ENST00000622549 70 ntBASIC1.66□□□□□ -2.14
RNF39Q9H2S5 SNORA67.6-201ENST00000391093 99 ntBASIC1.65□□□□□ -2.15
RNF39Q9H2S5 Y_RNA.327-201ENST00000365201 102 ntBASIC1.64□□□□□ -2.15
RNF39Q9H2S5 MIR489-201ENST00000384923 84 ntBASIC1.64□□□□□ -2.15
RNF39Q9H2S5 Y_RNA.781-201ENST00000620301 103 ntBASIC1.64□□□□□ -2.15
RNF39Q9H2S5 RNU6-997P-201ENST00000384725 107 ntBASIC1.63□□□□□ -2.15
RNF39Q9H2S5 AL590095.2-201ENST00000604136 117 ntBASIC1.62□□□□□ -2.15
RNF39Q9H2S5 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.62□□□□□ -2.15
RNF39Q9H2S5 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
RNF39Q9H2S5 MIR1304-201ENST00000408243 91 ntBASIC1.61□□□□□ -2.15
RNF39Q9H2S5 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
RNF39Q9H2S5 RNA5SP363-201ENST00000365072 115 ntBASIC1.6□□□□□ -2.15
RNF39Q9H2S5 MIR548J-201ENST00000408833 112 ntBASIC1.6□□□□□ -2.15
RNF39Q9H2S5 RNU6-863P-201ENST00000515989 104 ntBASIC1.6□□□□□ -2.15
RNF39Q9H2S5 RNU6-345P-201ENST00000517001 107 ntBASIC1.6□□□□□ -2.15
RNF39Q9H2S5 SNORA31.24-201ENST00000517232 57 ntBASIC1.6□□□□□ -2.15
RNF39Q9H2S5 NMTRQ-TTG12-1-201ENST00000467595 72 ntBASIC1.59□□□□□ -2.15
RNF39Q9H2S5 SNORD26-201ENST00000384147 75 ntBASIC1.58□□□□□ -2.16
RNF39Q9H2S5 MIR1276-201ENST00000408707 83 ntBASIC1.58□□□□□ -2.16
RNF39Q9H2S5 AL445193.1-201ENST00000441183 141 ntBASIC1.58□□□□□ -2.16
RNF39Q9H2S5 CR383656.4-201ENST00000546909 122 ntBASIC1.58□□□□□ -2.16
RNF39Q9H2S5 MIR6504-201ENST00000613520 61 ntBASIC1.58□□□□□ -2.16
RNF39Q9H2S5 RNU6-127P-201ENST00000390897 107 ntBASIC1.57□□□□□ -2.16
RNF39Q9H2S5 MIR4421-201ENST00000578133 69 ntBASIC1.57□□□□□ -2.16
RNF39Q9H2S5 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
RNF39Q9H2S5 SNORD74.6-201ENST00000364796 70 ntBASIC1.56□□□□□ -2.16
RNF39Q9H2S5 AC090616.4-201ENST00000448026 115 ntBASIC1.56□□□□□ -2.16
RNF39Q9H2S5 MIR3122-201ENST00000577243 73 ntBASIC1.56□□□□□ -2.16
RNF39Q9H2S5 MIR320A-201ENST00000385302 82 ntBASIC1.55□□□□□ -2.16
RNF39Q9H2S5 MIR1254-1-201ENST00000408257 97 ntBASIC1.55□□□□□ -2.16
RNF39Q9H2S5 MIR4280-201ENST00000582178 76 ntBASIC1.52□□□□□ -2.17
RNF39Q9H2S5 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.52□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 220.3 ms