Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 SNORD116-22-201ENST00000384430 92 ntBASIC-0.94□□□□□ -2.56
RPAP1Q9BWH6 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.94□□□□□ -2.56
RPAP1Q9BWH6 RNU6-732P-201ENST00000516033 103 ntBASIC-0.94□□□□□ -2.56
RPAP1Q9BWH6 RNU6-557P-201ENST00000516842 110 ntBASIC-0.94□□□□□ -2.56
RPAP1Q9BWH6 MIR378F-201ENST00000578143 78 ntBASIC-0.94□□□□□ -2.56
RPAP1Q9BWH6 MIR6818-201ENST00000621576 65 ntBASIC-0.94□□□□□ -2.56
RPAP1Q9BWH6 MIR29B1-201ENST00000385015 81 ntBASIC-0.95□□□□□ -2.56
RPAP1Q9BWH6 AC074348.1-201ENST00000426503 132 ntBASIC-0.95□□□□□ -2.56
RPAP1Q9BWH6 RNU6-982P-201ENST00000516216 102 ntBASIC-0.95□□□□□ -2.56
RPAP1Q9BWH6 RNU6-807P-201ENST00000516805 107 ntBASIC-0.95□□□□□ -2.56
RPAP1Q9BWH6 MIR3910-1-201ENST00000580936 111 ntBASIC-0.95□□□□□ -2.56
RPAP1Q9BWH6 MIR3675-201ENST00000583661 73 ntBASIC-0.95□□□□□ -2.56
RPAP1Q9BWH6 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.95□□□□□ -2.56
RPAP1Q9BWH6 RNU6-1325P-201ENST00000364905 105 ntBASIC-0.96□□□□□ -2.56
RPAP1Q9BWH6 RNU6-24P-201ENST00000384440 107 ntBASIC-0.96□□□□□ -2.56
RPAP1Q9BWH6 RNU6-313P-201ENST00000516317 112 ntBASIC-0.96□□□□□ -2.56
RPAP1Q9BWH6 SNORA40.13-201ENST00000516379 120 ntBASIC-0.96□□□□□ -2.56
RPAP1Q9BWH6 RNU6-303P-201ENST00000517091 106 ntBASIC-0.96□□□□□ -2.56
RPAP1Q9BWH6 AL353691.2-201ENST00000443795 59 ntBASIC-0.96□□□□□ -2.56
RPAP1Q9BWH6 RNU7-174P-201ENST00000516248 59 ntBASIC-0.96□□□□□ -2.56
RPAP1Q9BWH6 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.96□□□□□ -2.56
RPAP1Q9BWH6 MIR3115-201ENST00000577915 68 ntBASIC-0.96□□□□□ -2.56
RPAP1Q9BWH6 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.97□□□□□ -2.57
RPAP1Q9BWH6 RNU6-640P-201ENST00000363693 105 ntBASIC-0.97□□□□□ -2.57
RPAP1Q9BWH6 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.97□□□□□ -2.57
RPAP1Q9BWH6 RNU6-755P-201ENST00000364400 103 ntBASIC-0.97□□□□□ -2.57
RPAP1Q9BWH6 RNA5SP192-201ENST00000364404 120 ntBASIC-0.97□□□□□ -2.57
RPAP1Q9BWH6 Y_RNA.273-201ENST00000364703 102 ntBASIC-0.97□□□□□ -2.57
RPAP1Q9BWH6 RNU6-686P-201ENST00000364839 107 ntBASIC-0.97□□□□□ -2.57
RPAP1Q9BWH6 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.98□□□□□ -2.57
RPAP1Q9BWH6 MIR548C-201ENST00000384815 97 ntBASIC-0.98□□□□□ -2.57
RPAP1Q9BWH6 RNU6-604P-201ENST00000390917 100 ntBASIC-0.98□□□□□ -2.57
RPAP1Q9BWH6 Y_RNA.611-201ENST00000410682 108 ntBASIC-0.98□□□□□ -2.57
RPAP1Q9BWH6 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.98□□□□□ -2.57
RPAP1Q9BWH6 AC132825.6-201ENST00000638861 357 ntBASIC-0.98□□□□□ -2.57
RPAP1Q9BWH6 SNORD45.1-201ENST00000363181 77 ntBASIC-0.99□□□□□ -2.57
RPAP1Q9BWH6 SNORD113-1-201ENST00000365321 69 ntBASIC-0.99□□□□□ -2.57
RPAP1Q9BWH6 RNU6-675P-201ENST00000384236 104 ntBASIC-0.99□□□□□ -2.57
RPAP1Q9BWH6 SNORA8.1-201ENST00000384250 140 ntBASIC-0.99□□□□□ -2.57
RPAP1Q9BWH6 MIR507-201ENST00000385234 94 ntBASIC-0.99□□□□□ -2.57
RPAP1Q9BWH6 RNU6-1216P-201ENST00000362590 107 ntBASIC-1□□□□□ -2.57
RPAP1Q9BWH6 Y_RNA.74-201ENST00000362911 99 ntBASIC-1□□□□□ -2.57
RPAP1Q9BWH6 Y_RNA.365-201ENST00000365537 102 ntBASIC-1□□□□□ -2.57
RPAP1Q9BWH6 RNU6-587P-201ENST00000391282 106 ntBASIC-1□□□□□ -2.57
RPAP1Q9BWH6 MIR8485-201ENST00000401372 91 ntBASIC-1□□□□□ -2.57
RPAP1Q9BWH6 MIR5683-201ENST00000636514 76 ntBASIC-1□□□□□ -2.57
RPAP1Q9BWH6 SNORA63.4-201ENST00000362763 126 ntBASIC-1.01□□□□□ -2.57
RPAP1Q9BWH6 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.01□□□□□ -2.57
RPAP1Q9BWH6 RNU6-458P-201ENST00000384179 107 ntBASIC-1.01□□□□□ -2.57
RPAP1Q9BWH6 RNU6-129P-201ENST00000391022 107 ntBASIC-1.01□□□□□ -2.57
RPAP1Q9BWH6 RNA5SP461-201ENST00000516451 104 ntBASIC-1.01□□□□□ -2.57
RPAP1Q9BWH6 MIR4306-201ENST00000583390 91 ntBASIC-1.01□□□□□ -2.57
RPAP1Q9BWH6 U6.58-201ENST00000613107 107 ntBASIC-1.01□□□□□ -2.57
RPAP1Q9BWH6 AC006160.2-201ENST00000637708 154 ntBASIC-1.01□□□□□ -2.57
RPAP1Q9BWH6 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.02□□□□□ -2.57
RPAP1Q9BWH6 RNU6-147P-201ENST00000383983 107 ntBASIC-1.02□□□□□ -2.57
RPAP1Q9BWH6 RNU4-61P-201ENST00000411243 107 ntBASIC-1.02□□□□□ -2.57
RPAP1Q9BWH6 RPL35AP4-201ENST00000412007 102 ntBASIC-1.02□□□□□ -2.57
RPAP1Q9BWH6 MIR4484-201ENST00000582855 83 ntBASIC-1.02□□□□□ -2.57
RPAP1Q9BWH6 U4.2-201ENST00000618561 85 ntBASIC-1.02□□□□□ -2.57
RPAP1Q9BWH6 U4.4-201ENST00000620626 117 ntBASIC-1.02□□□□□ -2.57
RPAP1Q9BWH6 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.03□□□□□ -2.57
RPAP1Q9BWH6 AC090616.4-201ENST00000448026 115 ntBASIC-1.04□□□□□ -2.58
RPAP1Q9BWH6 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.04□□□□□ -2.58
RPAP1Q9BWH6 RNU6-844P-201ENST00000517175 102 ntBASIC-1.04□□□□□ -2.58
RPAP1Q9BWH6 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.05□□□□□ -2.58
RPAP1Q9BWH6 RNU6-598P-201ENST00000364017 105 ntBASIC-1.05□□□□□ -2.58
RPAP1Q9BWH6 RNU6-164P-201ENST00000364604 103 ntBASIC-1.05□□□□□ -2.58
RPAP1Q9BWH6 SNORD20-201ENST00000384550 80 ntBASIC-1.05□□□□□ -2.58
RPAP1Q9BWH6 MIR527-201ENST00000385244 85 ntBASIC-1.05□□□□□ -2.58
RPAP1Q9BWH6 AL606753.1-201ENST00000427435 87 ntBASIC-1.05□□□□□ -2.58
RPAP1Q9BWH6 AC091912.2-201ENST00000624798 167 ntBASIC-1.05□□□□□ -2.58
RPAP1Q9BWH6 MIR664A-201ENST00000626086 82 ntBASIC-1.05□□□□□ -2.58
RPAP1Q9BWH6 RNU6-698P-201ENST00000363523 107 ntBASIC-1.06□□□□□ -2.58
RPAP1Q9BWH6 RNU6-34P-201ENST00000364874 107 ntBASIC-1.06□□□□□ -2.58
RPAP1Q9BWH6 RNU6-215P-201ENST00000365169 102 ntBASIC-1.06□□□□□ -2.58
RPAP1Q9BWH6 RNU6-32P-201ENST00000383948 107 ntBASIC-1.06□□□□□ -2.58
RPAP1Q9BWH6 RNU6-13P-201ENST00000384248 107 ntBASIC-1.06□□□□□ -2.58
RPAP1Q9BWH6 RNU6-12P-201ENST00000384604 107 ntBASIC-1.06□□□□□ -2.58
RPAP1Q9BWH6 RNU6-41P-201ENST00000384741 107 ntBASIC-1.06□□□□□ -2.58
RPAP1Q9BWH6 RNU6-576P-201ENST00000390854 102 ntBASIC-1.06□□□□□ -2.58
RPAP1Q9BWH6 MIR889-201ENST00000401280 79 ntBASIC-1.06□□□□□ -2.58
RPAP1Q9BWH6 MIR548Q-201ENST00000408404 100 ntBASIC-1.06□□□□□ -2.58
RPAP1Q9BWH6 Y_RNA.629-201ENST00000411368 105 ntBASIC-1.06□□□□□ -2.58
RPAP1Q9BWH6 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.06□□□□□ -2.58
RPAP1Q9BWH6 MIR3165-201ENST00000579874 75 ntBASIC-1.06□□□□□ -2.58
RPAP1Q9BWH6 MIR4490-201ENST00000582647 84 ntBASIC-1.06□□□□□ -2.58
RPAP1Q9BWH6 MIR6874-201ENST00000635894 71 ntBASIC-1.06□□□□□ -2.58
RPAP1Q9BWH6 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.07□□□□□ -2.58
RPAP1Q9BWH6 RNU6-696P-201ENST00000390834 107 ntBASIC-1.07□□□□□ -2.58
RPAP1Q9BWH6 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.07□□□□□ -2.58
RPAP1Q9BWH6 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.07□□□□□ -2.58
RPAP1Q9BWH6 RNA5SP180-201ENST00000516181 101 ntBASIC-1.07□□□□□ -2.58
RPAP1Q9BWH6 MIR548V-201ENST00000584165 80 ntBASIC-1.07□□□□□ -2.58
RPAP1Q9BWH6 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.07□□□□□ -2.58
RPAP1Q9BWH6 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.07□□□□□ -2.58
RPAP1Q9BWH6 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.08□□□□□ -2.58
RPAP1Q9BWH6 SNORD113.1-201ENST00000363280 73 ntBASIC-1.08□□□□□ -2.58
RPAP1Q9BWH6 RNU6-49P-201ENST00000384256 107 ntBASIC-1.08□□□□□ -2.58
RPAP1Q9BWH6 MIR1297-201ENST00000637311 77 ntBASIC-1.08□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 202.5 ms