Protein–RNA interactions for Protein: Q96MR9

ZNF560, Zinc finger protein 560, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF560Q96MR9 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.88□□□□□ -2.55
ZNF560Q96MR9 SNORD113-1-201ENST00000365321 69 ntBASIC-0.88□□□□□ -2.55
ZNF560Q96MR9 RNU6-147P-201ENST00000383983 107 ntBASIC-0.88□□□□□ -2.55
ZNF560Q96MR9 RNU6-675P-201ENST00000384236 104 ntBASIC-0.88□□□□□ -2.55
ZNF560Q96MR9 MIR29B1-201ENST00000385015 81 ntBASIC-0.88□□□□□ -2.55
ZNF560Q96MR9 MIR507-201ENST00000385234 94 ntBASIC-0.88□□□□□ -2.55
ZNF560Q96MR9 MIR8485-201ENST00000401372 91 ntBASIC-0.88□□□□□ -2.55
ZNF560Q96MR9 RPL35AP4-201ENST00000412007 102 ntBASIC-0.88□□□□□ -2.55
ZNF560Q96MR9 AL353691.2-201ENST00000443795 59 ntBASIC-0.88□□□□□ -2.55
ZNF560Q96MR9 HAR1A.1-201ENST00000459583 118 ntBASIC-0.88□□□□□ -2.55
ZNF560Q96MR9 SNORA40.13-201ENST00000516379 120 ntBASIC-0.88□□□□□ -2.55
ZNF560Q96MR9 MIR3675-201ENST00000583661 73 ntBASIC-0.88□□□□□ -2.55
ZNF560Q96MR9 U4.4-201ENST00000620626 117 ntBASIC-0.88□□□□□ -2.55
ZNF560Q96MR9 MIR2052-201ENST00000636055 55 ntBASIC-0.88□□□□□ -2.55
ZNF560Q96MR9 AC006160.2-201ENST00000637708 154 ntBASIC-0.88□□□□□ -2.55
ZNF560Q96MR9 AC132825.6-201ENST00000638861 357 ntBASIC-0.88□□□□□ -2.55
ZNF560Q96MR9 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.89□□□□□ -2.55
ZNF560Q96MR9 RNU6-686P-201ENST00000364839 107 ntBASIC-0.89□□□□□ -2.55
ZNF560Q96MR9 RNU6-458P-201ENST00000384179 107 ntBASIC-0.89□□□□□ -2.55
ZNF560Q96MR9 RNU6-30P-201ENST00000384561 107 ntBASIC-0.89□□□□□ -2.55
ZNF560Q96MR9 RNY1P9-201ENST00000532431 109 ntBASIC-0.89□□□□□ -2.55
ZNF560Q96MR9 U6.58-201ENST00000613107 107 ntBASIC-0.89□□□□□ -2.55
ZNF560Q96MR9 MIR664A-201ENST00000626086 82 ntBASIC-0.89□□□□□ -2.55
ZNF560Q96MR9 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.9□□□□□ -2.55
ZNF560Q96MR9 snoU13.19-201ENST00000459148 104 ntBASIC-0.9□□□□□ -2.55
ZNF560Q96MR9 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.9□□□□□ -2.55
ZNF560Q96MR9 MIR548AX-201ENST00000580117 73 ntBASIC-0.9□□□□□ -2.55
ZNF560Q96MR9 MIR5683-201ENST00000636514 76 ntBASIC-0.9□□□□□ -2.55
ZNF560Q96MR9 SNORD45.1-201ENST00000363181 77 ntBASIC-0.91□□□□□ -2.56
ZNF560Q96MR9 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.91□□□□□ -2.56
ZNF560Q96MR9 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.91□□□□□ -2.56
ZNF560Q96MR9 Y_RNA.365-201ENST00000365537 102 ntBASIC-0.91□□□□□ -2.56
ZNF560Q96MR9 RNU6-49P-201ENST00000384256 107 ntBASIC-0.91□□□□□ -2.56
ZNF560Q96MR9 RNU6-129P-201ENST00000391022 107 ntBASIC-0.91□□□□□ -2.56
ZNF560Q96MR9 RNU6-587P-201ENST00000391282 106 ntBASIC-0.91□□□□□ -2.56
ZNF560Q96MR9 RNU6-844P-201ENST00000517175 102 ntBASIC-0.91□□□□□ -2.56
ZNF560Q96MR9 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.92□□□□□ -2.56
ZNF560Q96MR9 RNA5SP67-201ENST00000516422 131 ntBASIC-0.92□□□□□ -2.56
ZNF560Q96MR9 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.92□□□□□ -2.56
ZNF560Q96MR9 MIR4324-201ENST00000584846 72 ntBASIC-0.92□□□□□ -2.56
ZNF560Q96MR9 MIR6738-201ENST00000619620 64 ntBASIC-0.92□□□□□ -2.56
ZNF560Q96MR9 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-0.92□□□□□ -2.56
ZNF560Q96MR9 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.93□□□□□ -2.56
ZNF560Q96MR9 RNU6-215P-201ENST00000365169 102 ntBASIC-0.93□□□□□ -2.56
ZNF560Q96MR9 RNU6-32P-201ENST00000383948 107 ntBASIC-0.93□□□□□ -2.56
ZNF560Q96MR9 RNU6-13P-201ENST00000384248 107 ntBASIC-0.93□□□□□ -2.56
ZNF560Q96MR9 SNORD20-201ENST00000384550 80 ntBASIC-0.93□□□□□ -2.56
ZNF560Q96MR9 RNU6-12P-201ENST00000384604 107 ntBASIC-0.93□□□□□ -2.56
ZNF560Q96MR9 RNU6-41P-201ENST00000384741 107 ntBASIC-0.93□□□□□ -2.56
ZNF560Q96MR9 MIR520D-201ENST00000385002 87 ntBASIC-0.93□□□□□ -2.56
ZNF560Q96MR9 MIR889-201ENST00000401280 79 ntBASIC-0.93□□□□□ -2.56
ZNF560Q96MR9 RNU4-61P-201ENST00000411243 107 ntBASIC-0.93□□□□□ -2.56
ZNF560Q96MR9 MIR548V-201ENST00000584165 80 ntBASIC-0.93□□□□□ -2.56
ZNF560Q96MR9 AC091912.2-201ENST00000624798 167 ntBASIC-0.93□□□□□ -2.56
ZNF560Q96MR9 MIR6874-201ENST00000635894 71 ntBASIC-0.93□□□□□ -2.56
ZNF560Q96MR9 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.94□□□□□ -2.56
ZNF560Q96MR9 RNU6-598P-201ENST00000364017 105 ntBASIC-0.94□□□□□ -2.56
ZNF560Q96MR9 SNORD45A-201ENST00000384512 84 ntBASIC-0.94□□□□□ -2.56
ZNF560Q96MR9 AC090616.4-201ENST00000448026 115 ntBASIC-0.94□□□□□ -2.56
ZNF560Q96MR9 MIR4306-201ENST00000583390 91 ntBASIC-0.94□□□□□ -2.56
ZNF560Q96MR9 U2.18-201ENST00000622185 84 ntBASIC-0.94□□□□□ -2.56
ZNF560Q96MR9 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.95□□□□□ -2.56
ZNF560Q96MR9 MIR527-201ENST00000385244 85 ntBASIC-0.95□□□□□ -2.56
ZNF560Q96MR9 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.95□□□□□ -2.56
ZNF560Q96MR9 RNU6-698P-201ENST00000363523 107 ntBASIC-0.96□□□□□ -2.56
ZNF560Q96MR9 RNU6-34P-201ENST00000364874 107 ntBASIC-0.96□□□□□ -2.56
ZNF560Q96MR9 MIR630-201ENST00000384957 97 ntBASIC-0.96□□□□□ -2.56
ZNF560Q96MR9 MIR548Q-201ENST00000408404 100 ntBASIC-0.96□□□□□ -2.56
ZNF560Q96MR9 Y_RNA.629-201ENST00000411368 105 ntBASIC-0.96□□□□□ -2.56
ZNF560Q96MR9 SNORD57-201ENST00000448188 72 ntBASIC-0.96□□□□□ -2.56
ZNF560Q96MR9 SNORD113.1-201ENST00000363280 73 ntBASIC-0.97□□□□□ -2.56
ZNF560Q96MR9 RNU6-10P-201ENST00000384036 107 ntBASIC-0.97□□□□□ -2.56
ZNF560Q96MR9 RNU6-696P-201ENST00000390834 107 ntBASIC-0.97□□□□□ -2.56
ZNF560Q96MR9 RNU6-576P-201ENST00000390854 102 ntBASIC-0.97□□□□□ -2.56
ZNF560Q96MR9 AL606753.1-201ENST00000427435 87 ntBASIC-0.97□□□□□ -2.56
ZNF560Q96MR9 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.98□□□□□ -2.57
ZNF560Q96MR9 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.98□□□□□ -2.57
ZNF560Q96MR9 RNU6-608P-201ENST00000383927 104 ntBASIC-0.98□□□□□ -2.57
ZNF560Q96MR9 RNU6-44P-201ENST00000384045 107 ntBASIC-0.98□□□□□ -2.57
ZNF560Q96MR9 RNU6-24P-201ENST00000384440 107 ntBASIC-0.98□□□□□ -2.57
ZNF560Q96MR9 RNU6-630P-201ENST00000391258 106 ntBASIC-0.98□□□□□ -2.57
ZNF560Q96MR9 MIR5588-201ENST00000581890 63 ntBASIC-0.98□□□□□ -2.57
ZNF560Q96MR9 MIR4490-201ENST00000582647 84 ntBASIC-0.98□□□□□ -2.57
ZNF560Q96MR9 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.98□□□□□ -2.57
ZNF560Q96MR9 RNU6-164P-201ENST00000364604 103 ntBASIC-0.99□□□□□ -2.57
ZNF560Q96MR9 SNORA41B-201ENST00000384785 128 ntBASIC-0.99□□□□□ -2.57
ZNF560Q96MR9 MIR587-201ENST00000384845 96 ntBASIC-0.99□□□□□ -2.57
ZNF560Q96MR9 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.99□□□□□ -2.57
ZNF560Q96MR9 SNORD113-2-201ENST00000391082 72 ntBASIC-0.99□□□□□ -2.57
ZNF560Q96MR9 RNA5SP89-201ENST00000410300 108 ntBASIC-0.99□□□□□ -2.57
ZNF560Q96MR9 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.99□□□□□ -2.57
ZNF560Q96MR9 RNU6-919P-201ENST00000516731 104 ntBASIC-0.99□□□□□ -2.57
ZNF560Q96MR9 RNU6-979P-201ENST00000383896 107 ntBASIC-1□□□□□ -2.57
ZNF560Q96MR9 RNU6-168P-201ENST00000516189 101 ntBASIC-1.01□□□□□ -2.57
ZNF560Q96MR9 MIR4712-201ENST00000583750 82 ntBASIC-1.01□□□□□ -2.57
ZNF560Q96MR9 MIR1297-201ENST00000637311 77 ntBASIC-1.01□□□□□ -2.57
ZNF560Q96MR9 RNU6-315P-201ENST00000362666 107 ntBASIC-1.02□□□□□ -2.57
ZNF560Q96MR9 SNORD1B-201ENST00000363091 84 ntBASIC-1.02□□□□□ -2.57
ZNF560Q96MR9 SNORD116-24-201ENST00000384549 92 ntBASIC-1.02□□□□□ -2.57
ZNF560Q96MR9 RNU6-258P-201ENST00000390884 101 ntBASIC-1.02□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 215.5 ms