Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 RNU6-686P-201ENST00000364839 107 ntBASIC-0.9□□□□□ -2.55
SNRNP40Q96DI7 Y_RNA.291-201ENST00000364886 113 ntBASIC-0.9□□□□□ -2.55
SNRNP40Q96DI7 MIR587-201ENST00000384845 96 ntBASIC-0.9□□□□□ -2.55
SNRNP40Q96DI7 RNU6-656P-201ENST00000516785 107 ntBASIC-0.9□□□□□ -2.55
SNRNP40Q96DI7 MIR378F-201ENST00000578143 78 ntBASIC-0.9□□□□□ -2.55
SNRNP40Q96DI7 AC074348.1-201ENST00000426503 132 ntBASIC-0.91□□□□□ -2.56
SNRNP40Q96DI7 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.91□□□□□ -2.56
SNRNP40Q96DI7 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.91□□□□□ -2.56
SNRNP40Q96DI7 MIRLET7A1-201ENST00000362295 80 ntBASIC-0.92□□□□□ -2.56
SNRNP40Q96DI7 AL021921.1-201ENST00000442774 93 ntBASIC-0.92□□□□□ -2.56
SNRNP40Q96DI7 RNU6-478P-201ENST00000363904 110 ntBASIC-0.93□□□□□ -2.56
SNRNP40Q96DI7 RNU6-1134P-201ENST00000365156 101 ntBASIC-0.93□□□□□ -2.56
SNRNP40Q96DI7 RNU6-129P-201ENST00000391022 107 ntBASIC-0.93□□□□□ -2.56
SNRNP40Q96DI7 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.94□□□□□ -2.56
SNRNP40Q96DI7 RNU6-168P-201ENST00000516189 101 ntBASIC-0.94□□□□□ -2.56
SNRNP40Q96DI7 AC006160.2-201ENST00000637708 154 ntBASIC-0.94□□□□□ -2.56
SNRNP40Q96DI7 Y_RNA.17-201ENST00000362433 111 ntBASIC-0.95□□□□□ -2.56
SNRNP40Q96DI7 RNU6-924P-201ENST00000362926 108 ntBASIC-0.95□□□□□ -2.56
SNRNP40Q96DI7 RNU6-645P-201ENST00000364649 106 ntBASIC-0.95□□□□□ -2.56
SNRNP40Q96DI7 MIR4484-201ENST00000582855 83 ntBASIC-0.95□□□□□ -2.56
SNRNP40Q96DI7 MIR3675-201ENST00000583661 73 ntBASIC-0.95□□□□□ -2.56
SNRNP40Q96DI7 MIR4324-201ENST00000584846 72 ntBASIC-0.95□□□□□ -2.56
SNRNP40Q96DI7 SNORA8.1-201ENST00000384250 140 ntBASIC-0.96□□□□□ -2.56
SNRNP40Q96DI7 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.96□□□□□ -2.56
SNRNP40Q96DI7 MIR4723-201ENST00000585070 81 ntBASIC-0.96□□□□□ -2.56
SNRNP40Q96DI7 U2.7-201ENST00000619197 100 ntBASIC-0.96□□□□□ -2.56
SNRNP40Q96DI7 U2.22-201ENST00000636441 106 ntBASIC-0.96□□□□□ -2.56
SNRNP40Q96DI7 MIR198-201ENST00000637333 62 ntBASIC-0.96□□□□□ -2.56
SNRNP40Q96DI7 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.97□□□□□ -2.56
SNRNP40Q96DI7 RNA5SP89-201ENST00000410300 108 ntBASIC-0.97□□□□□ -2.56
SNRNP40Q96DI7 RNU6-807P-201ENST00000516805 107 ntBASIC-0.97□□□□□ -2.56
SNRNP40Q96DI7 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.97□□□□□ -2.56
SNRNP40Q96DI7 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.98□□□□□ -2.57
SNRNP40Q96DI7 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.98□□□□□ -2.57
SNRNP40Q96DI7 RNU6-49P-201ENST00000384256 107 ntBASIC-0.98□□□□□ -2.57
SNRNP40Q96DI7 RNU7-134P-201ENST00000458997 64 ntBASIC-0.98□□□□□ -2.57
SNRNP40Q96DI7 MIR548AG1-201ENST00000579932 66 ntBASIC-0.98□□□□□ -2.57
SNRNP40Q96DI7 SNORD45.1-201ENST00000363181 77 ntBASIC-0.99□□□□□ -2.57
SNRNP40Q96DI7 RNU6-604P-201ENST00000390917 100 ntBASIC-0.99□□□□□ -2.57
SNRNP40Q96DI7 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.99□□□□□ -2.57
SNRNP40Q96DI7 IGLL4P-201ENST00000614590 133 ntBASIC-0.99□□□□□ -2.57
SNRNP40Q96DI7 MIR1297-201ENST00000637311 77 ntBASIC-0.99□□□□□ -2.57
SNRNP40Q96DI7 RNU6-24P-201ENST00000384440 107 ntBASIC-1□□□□□ -2.57
SNRNP40Q96DI7 RNY4P30-201ENST00000410216 95 ntBASIC-1□□□□□ -2.57
SNRNP40Q96DI7 RNU7-88P-201ENST00000458752 63 ntBASIC-1□□□□□ -2.57
SNRNP40Q96DI7 RNU6-982P-201ENST00000516216 102 ntBASIC-1□□□□□ -2.57
SNRNP40Q96DI7 MIR6738-201ENST00000619620 64 ntBASIC-1□□□□□ -2.57
SNRNP40Q96DI7 MIR4320-201ENST00000636981 65 ntBASIC-1□□□□□ -2.57
SNRNP40Q96DI7 RNY1P1-201ENST00000364372 112 ntBASIC-1.01□□□□□ -2.57
SNRNP40Q96DI7 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.01□□□□□ -2.57
SNRNP40Q96DI7 snoU83B.1-201ENST00000517136 88 ntBASIC-1.01□□□□□ -2.57
SNRNP40Q96DI7 MIR4306-201ENST00000583390 91 ntBASIC-1.01□□□□□ -2.57
SNRNP40Q96DI7 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.01□□□□□ -2.57
SNRNP40Q96DI7 RNU6-315P-201ENST00000362666 107 ntBASIC-1.02□□□□□ -2.57
SNRNP40Q96DI7 MIR601-201ENST00000385256 79 ntBASIC-1.02□□□□□ -2.57
SNRNP40Q96DI7 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.03□□□□□ -2.57
SNRNP40Q96DI7 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.03□□□□□ -2.57
SNRNP40Q96DI7 RNU6-380P-201ENST00000410207 107 ntBASIC-1.03□□□□□ -2.57
SNRNP40Q96DI7 SNORD63.1-201ENST00000516178 80 ntBASIC-1.03□□□□□ -2.57
SNRNP40Q96DI7 MIR5588-201ENST00000581890 63 ntBASIC-1.03□□□□□ -2.57
SNRNP40Q96DI7 RNU6-153P-201ENST00000364422 104 ntBASIC-1.04□□□□□ -2.58
SNRNP40Q96DI7 SNORA26.4-201ENST00000391188 123 ntBASIC-1.04□□□□□ -2.58
SNRNP40Q96DI7 MIR8485-201ENST00000401372 91 ntBASIC-1.04□□□□□ -2.58
SNRNP40Q96DI7 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.05□□□□□ -2.58
SNRNP40Q96DI7 RNU6-979P-201ENST00000383896 107 ntBASIC-1.05□□□□□ -2.58
SNRNP40Q96DI7 U7.5-201ENST00000517224 61 ntBASIC-1.05□□□□□ -2.58
SNRNP40Q96DI7 MIR3115-201ENST00000577915 68 ntBASIC-1.05□□□□□ -2.58
SNRNP40Q96DI7 SNORD115-33-201ENST00000363723 82 ntBASIC-1.06□□□□□ -2.58
SNRNP40Q96DI7 RNU6-10P-201ENST00000384036 107 ntBASIC-1.06□□□□□ -2.58
SNRNP40Q96DI7 Y_RNA.468-201ENST00000384298 102 ntBASIC-1.06□□□□□ -2.58
SNRNP40Q96DI7 RNU7-174P-201ENST00000516248 59 ntBASIC-1.06□□□□□ -2.58
SNRNP40Q96DI7 SNORD115-22-201ENST00000364456 82 ntBASIC-1.07□□□□□ -2.58
SNRNP40Q96DI7 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.07□□□□□ -2.58
SNRNP40Q96DI7 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.07□□□□□ -2.58
SNRNP40Q96DI7 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.07□□□□□ -2.58
SNRNP40Q96DI7 MIR664A-201ENST00000626086 82 ntBASIC-1.07□□□□□ -2.58
SNRNP40Q96DI7 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.08□□□□□ -2.58
SNRNP40Q96DI7 RNU6-246P-201ENST00000384702 107 ntBASIC-1.08□□□□□ -2.58
SNRNP40Q96DI7 RNU7-171P-201ENST00000459581 62 ntBASIC-1.08□□□□□ -2.58
SNRNP40Q96DI7 MIR548V-201ENST00000584165 80 ntBASIC-1.08□□□□□ -2.58
SNRNP40Q96DI7 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.1□□□□□ -2.59
SNRNP40Q96DI7 MIR8053-201ENST00000613344 75 ntBASIC-1.1□□□□□ -2.59
SNRNP40Q96DI7 RNA5SP192-201ENST00000364404 120 ntBASIC-1.11□□□□□ -2.59
SNRNP40Q96DI7 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.11□□□□□ -2.59
SNRNP40Q96DI7 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.11□□□□□ -2.59
SNRNP40Q96DI7 RNU6-732P-201ENST00000516033 103 ntBASIC-1.11□□□□□ -2.59
SNRNP40Q96DI7 MIR494-201ENST00000349529 81 ntBASIC-1.12□□□□□ -2.59
SNRNP40Q96DI7 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.12□□□□□ -2.59
SNRNP40Q96DI7 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.12□□□□□ -2.59
SNRNP40Q96DI7 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.12□□□□□ -2.59
SNRNP40Q96DI7 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.13□□□□□ -2.59
SNRNP40Q96DI7 SNORD45A-201ENST00000384512 84 ntBASIC-1.13□□□□□ -2.59
SNRNP40Q96DI7 MIR527-201ENST00000385244 85 ntBASIC-1.13□□□□□ -2.59
SNRNP40Q96DI7 MIR889-201ENST00000401280 79 ntBASIC-1.13□□□□□ -2.59
SNRNP40Q96DI7 AL353691.2-201ENST00000443795 59 ntBASIC-1.13□□□□□ -2.59
SNRNP40Q96DI7 MTND4LP1-201ENST00000446263 157 ntBASIC-1.13□□□□□ -2.59
SNRNP40Q96DI7 MIR6818-201ENST00000621576 65 ntBASIC-1.13□□□□□ -2.59
SNRNP40Q96DI7 RNU6-698P-201ENST00000363523 107 ntBASIC-1.14□□□□□ -2.59
SNRNP40Q96DI7 RNU6-34P-201ENST00000364874 107 ntBASIC-1.14□□□□□ -2.59
SNRNP40Q96DI7 RNU6-458P-201ENST00000384179 107 ntBASIC-1.14□□□□□ -2.59
Retrieved 100 of 98,524 protein–RNA pairs in 200.2 ms