Protein–RNA interactions for Protein: Q8TE12

LMX1A, LIM homeobox transcription factor 1-alpha, humanhuman

Predictions only

Length 382 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1AQ8TE12 RNU6-1267P-201ENST00000410747 107 ntBASIC-1.19□□□□□ -2.6
LMX1AQ8TE12 AC018880.2-201ENST00000414265 201 ntBASIC-1.19□□□□□ -2.6
LMX1AQ8TE12 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.19□□□□□ -2.6
LMX1AQ8TE12 RNU6-267P-201ENST00000516714 103 ntBASIC-1.19□□□□□ -2.6
LMX1AQ8TE12 AL353621.2-201ENST00000605340 133 ntBASIC-1.19□□□□□ -2.6
LMX1AQ8TE12 MTRNR2L9-201ENST00000622562 75 ntBASIC-1.19□□□□□ -2.6
LMX1AQ8TE12 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.2□□□□□ -2.6
LMX1AQ8TE12 RNU6-624P-201ENST00000363411 107 ntBASIC-1.2□□□□□ -2.6
LMX1AQ8TE12 MIR519C-201ENST00000385053 87 ntBASIC-1.2□□□□□ -2.6
LMX1AQ8TE12 RNU6-400P-201ENST00000391173 106 ntBASIC-1.2□□□□□ -2.6
LMX1AQ8TE12 MIR3170-201ENST00000582699 77 ntBASIC-1.2□□□□□ -2.6
LMX1AQ8TE12 U6.95-201ENST00000636931 70 ntBASIC-1.2□□□□□ -2.6
LMX1AQ8TE12 Y_RNA.175-201ENST00000363794 111 ntBASIC-1.21□□□□□ -2.6
LMX1AQ8TE12 RNU6-694P-201ENST00000364071 147 ntBASIC-1.21□□□□□ -2.6
LMX1AQ8TE12 SNORA8.1-201ENST00000384250 140 ntBASIC-1.21□□□□□ -2.6
LMX1AQ8TE12 SNORA41B-201ENST00000384785 128 ntBASIC-1.21□□□□□ -2.6
LMX1AQ8TE12 MIR601-201ENST00000385256 79 ntBASIC-1.21□□□□□ -2.6
LMX1AQ8TE12 RNU6-633P-201ENST00000362612 103 ntBASIC-1.22□□□□□ -2.6
LMX1AQ8TE12 SNORD18.1-201ENST00000363807 70 ntBASIC-1.22□□□□□ -2.6
LMX1AQ8TE12 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.22□□□□□ -2.6
LMX1AQ8TE12 RNU6-219P-201ENST00000364728 107 ntBASIC-1.22□□□□□ -2.6
LMX1AQ8TE12 AC074348.1-201ENST00000426503 132 ntBASIC-1.22□□□□□ -2.6
LMX1AQ8TE12 MTATP8P2-201ENST00000435212 202 ntBASIC-1.22□□□□□ -2.6
LMX1AQ8TE12 AC108019.1-201ENST00000512540 175 ntBASIC-1.22□□□□□ -2.6
LMX1AQ8TE12 RNU6-158P-201ENST00000517104 100 ntBASIC-1.22□□□□□ -2.6
LMX1AQ8TE12 AC120024.2-201ENST00000576526 175 ntBASIC-1.22□□□□□ -2.6
LMX1AQ8TE12 MIR4756-201ENST00000577874 78 ntBASIC-1.22□□□□□ -2.6
LMX1AQ8TE12 MIR548V-201ENST00000584165 80 ntBASIC-1.22□□□□□ -2.6
LMX1AQ8TE12 SNORD1B-201ENST00000363091 84 ntBASIC-1.23□□□□□ -2.61
LMX1AQ8TE12 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.23□□□□□ -2.61
LMX1AQ8TE12 Y_RNA.257-201ENST00000364596 102 ntBASIC-1.23□□□□□ -2.61
LMX1AQ8TE12 MIR630-201ENST00000384957 97 ntBASIC-1.23□□□□□ -2.61
LMX1AQ8TE12 SNORD113-2-201ENST00000391082 72 ntBASIC-1.23□□□□□ -2.61
LMX1AQ8TE12 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.23□□□□□ -2.61
LMX1AQ8TE12 MIR4668-201ENST00000582284 70 ntBASIC-1.23□□□□□ -2.61
LMX1AQ8TE12 AC005520.4-201ENST00000604337 90 ntBASIC-1.23□□□□□ -2.61
LMX1AQ8TE12 AC013734.1-201ENST00000619329 111 ntBASIC-1.23□□□□□ -2.61
LMX1AQ8TE12 MIR664A-201ENST00000626086 82 ntBASIC-1.23□□□□□ -2.61
LMX1AQ8TE12 MIR1246-201ENST00000636535 73 ntBASIC-1.23□□□□□ -2.61
LMX1AQ8TE12 RNU6-698P-201ENST00000363523 107 ntBASIC-1.24□□□□□ -2.61
LMX1AQ8TE12 RNU6-681P-201ENST00000364012 104 ntBASIC-1.24□□□□□ -2.61
LMX1AQ8TE12 RNU6-34P-201ENST00000364874 107 ntBASIC-1.24□□□□□ -2.61
LMX1AQ8TE12 SNORD116-14-201ENST00000383894 92 ntBASIC-1.24□□□□□ -2.61
LMX1AQ8TE12 SNORD116-17-201ENST00000383929 92 ntBASIC-1.24□□□□□ -2.61
LMX1AQ8TE12 SNORD116-15-201ENST00000384445 92 ntBASIC-1.24□□□□□ -2.61
LMX1AQ8TE12 SNORD116-19-201ENST00000384729 92 ntBASIC-1.24□□□□□ -2.61
LMX1AQ8TE12 RNU6-1212P-201ENST00000517023 104 ntBASIC-1.24□□□□□ -2.61
LMX1AQ8TE12 MIR4484-201ENST00000582855 83 ntBASIC-1.24□□□□□ -2.61
LMX1AQ8TE12 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.25□□□□□ -2.61
LMX1AQ8TE12 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.25□□□□□ -2.61
LMX1AQ8TE12 Y_RNA.340-201ENST00000365330 92 ntBASIC-1.25□□□□□ -2.61
LMX1AQ8TE12 Y_RNA.449-201ENST00000384187 102 ntBASIC-1.25□□□□□ -2.61
LMX1AQ8TE12 RNU6-695P-201ENST00000391157 104 ntBASIC-1.25□□□□□ -2.61
LMX1AQ8TE12 MIR3123-201ENST00000583417 75 ntBASIC-1.25□□□□□ -2.61
LMX1AQ8TE12 MIR3675-201ENST00000583661 73 ntBASIC-1.25□□□□□ -2.61
LMX1AQ8TE12 MIRLET7A1-201ENST00000362295 80 ntBASIC-1.26□□□□□ -2.61
LMX1AQ8TE12 SNORD45.1-201ENST00000363181 77 ntBASIC-1.26□□□□□ -2.61
LMX1AQ8TE12 Y_RNA.232-201ENST00000364369 96 ntBASIC-1.26□□□□□ -2.61
LMX1AQ8TE12 RNU6-974P-201ENST00000384099 108 ntBASIC-1.26□□□□□ -2.61
LMX1AQ8TE12 RNU6-402P-201ENST00000410678 103 ntBASIC-1.26□□□□□ -2.61
LMX1AQ8TE12 RNA5SP180-201ENST00000516181 101 ntBASIC-1.26□□□□□ -2.61
LMX1AQ8TE12 SNORD115-31-201ENST00000365318 82 ntBASIC-1.27□□□□□ -2.61
LMX1AQ8TE12 Y_RNA.343-201ENST00000365354 112 ntBASIC-1.27□□□□□ -2.61
LMX1AQ8TE12 RNY1P5-201ENST00000383890 115 ntBASIC-1.27□□□□□ -2.61
LMX1AQ8TE12 SNORD116-16-201ENST00000384533 92 ntBASIC-1.27□□□□□ -2.61
LMX1AQ8TE12 RNU6-303P-201ENST00000517091 106 ntBASIC-1.27□□□□□ -2.61
LMX1AQ8TE12 MIR198-201ENST00000637333 62 ntBASIC-1.27□□□□□ -2.61
LMX1AQ8TE12 MIR579-201ENST00000385221 98 ntBASIC-1.28□□□□□ -2.61
LMX1AQ8TE12 MIR1285-2-201ENST00000408311 88 ntBASIC-1.28□□□□□ -2.61
LMX1AQ8TE12 AC093729.1-201ENST00000513074 128 ntBASIC-1.28□□□□□ -2.61
LMX1AQ8TE12 RNU6-557P-201ENST00000516842 110 ntBASIC-1.28□□□□□ -2.61
LMX1AQ8TE12 RNU6-182P-201ENST00000516970 105 ntBASIC-1.28□□□□□ -2.61
LMX1AQ8TE12 MIR4723-201ENST00000585070 81 ntBASIC-1.28□□□□□ -2.61
LMX1AQ8TE12 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.28□□□□□ -2.61
LMX1AQ8TE12 MIR548BB-201ENST00000626714 66 ntBASIC-1.28□□□□□ -2.61
LMX1AQ8TE12 AC099654.10-201ENST00000640395 161 ntBASIC-1.28□□□□□ -2.61
LMX1AQ8TE12 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.29□□□□□ -2.62
LMX1AQ8TE12 RNU6-766P-201ENST00000362478 107 ntBASIC-1.29□□□□□ -2.62
LMX1AQ8TE12 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.29□□□□□ -2.62
LMX1AQ8TE12 Y_RNA.464-201ENST00000384282 110 ntBASIC-1.29□□□□□ -2.62
LMX1AQ8TE12 SNORD45A-201ENST00000384512 84 ntBASIC-1.29□□□□□ -2.62
LMX1AQ8TE12 MIR1302-5-201ENST00000408164 150 ntBASIC-1.29□□□□□ -2.62
LMX1AQ8TE12 RNY3P8-201ENST00000411366 126 ntBASIC-1.29□□□□□ -2.62
LMX1AQ8TE12 RNU6-983P-201ENST00000516004 103 ntBASIC-1.29□□□□□ -2.62
LMX1AQ8TE12 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-1.29□□□□□ -2.62
LMX1AQ8TE12 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-1.29□□□□□ -2.62
LMX1AQ8TE12 MIR7978-201ENST00000636158 59 ntBASIC-1.29□□□□□ -2.62
LMX1AQ8TE12 Y_RNA.96-201ENST00000363092 109 ntBASIC-1.3□□□□□ -2.62
LMX1AQ8TE12 Y_RNA.180-201ENST00000363867 113 ntBASIC-1.3□□□□□ -2.62
LMX1AQ8TE12 MIR488-201ENST00000365739 83 ntBASIC-1.3□□□□□ -2.62
LMX1AQ8TE12 RNU6-1081P-201ENST00000384537 107 ntBASIC-1.3□□□□□ -2.62
LMX1AQ8TE12 RNU6-1152P-201ENST00000384576 107 ntBASIC-1.3□□□□□ -2.62
LMX1AQ8TE12 RNU6-589P-201ENST00000516485 107 ntBASIC-1.3□□□□□ -2.62
LMX1AQ8TE12 MIR450A1-201ENST00000362262 91 ntBASIC-1.31□□□□□ -2.62
LMX1AQ8TE12 SNORD113.1-201ENST00000363280 73 ntBASIC-1.31□□□□□ -2.62
LMX1AQ8TE12 Y_RNA.223-201ENST00000364290 113 ntBASIC-1.31□□□□□ -2.62
LMX1AQ8TE12 RNU7-151P-201ENST00000516930 53 ntBASIC-1.31□□□□□ -2.62
LMX1AQ8TE12 MIR548AM-201ENST00000584298 74 ntBASIC-1.31□□□□□ -2.62
LMX1AQ8TE12 RNU6-686P-201ENST00000364839 107 ntBASIC-1.32□□□□□ -2.62
LMX1AQ8TE12 RNU6-669P-201ENST00000365575 107 ntBASIC-1.32□□□□□ -2.62
Retrieved 100 of 98,524 protein–RNA pairs in 7.7 ms