Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 RNU6-604P-201ENST00000390917 100 ntBASIC-1.32□□□□□ -2.62
CCDC197Q8NCU1 SCARNA18B-201ENST00000458806 135 ntBASIC-1.32□□□□□ -2.62
CCDC197Q8NCU1 SNORD63.1-201ENST00000516178 80 ntBASIC-1.32□□□□□ -2.62
CCDC197Q8NCU1 SCARNA17-201ENST00000516183 144 ntBASIC-1.32□□□□□ -2.62
CCDC197Q8NCU1 Y_RNA.17-201ENST00000362433 111 ntBASIC-1.33□□□□□ -2.62
CCDC197Q8NCU1 RNU6-246P-201ENST00000384702 107 ntBASIC-1.33□□□□□ -2.62
CCDC197Q8NCU1 SCARNA21.1-201ENST00000515996 128 ntBASIC-1.34□□□□□ -2.62
CCDC197Q8NCU1 MIR4499-201ENST00000584834 69 ntBASIC-1.34□□□□□ -2.62
CCDC197Q8NCU1 MIR1297-201ENST00000637311 77 ntBASIC-1.34□□□□□ -2.62
CCDC197Q8NCU1 SNORD115-22-201ENST00000364456 82 ntBASIC-1.35□□□□□ -2.63
CCDC197Q8NCU1 RNU6-44P-201ENST00000384045 107 ntBASIC-1.35□□□□□ -2.63
CCDC197Q8NCU1 Y_RNA.593-201ENST00000410292 98 ntBASIC-1.35□□□□□ -2.63
CCDC197Q8NCU1 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.35□□□□□ -2.63
CCDC197Q8NCU1 SNORD45.1-201ENST00000363181 77 ntBASIC-1.36□□□□□ -2.63
CCDC197Q8NCU1 RNU6-1134P-201ENST00000365156 101 ntBASIC-1.36□□□□□ -2.63
CCDC197Q8NCU1 MIR548C-201ENST00000384815 97 ntBASIC-1.36□□□□□ -2.63
CCDC197Q8NCU1 RNU4-61P-201ENST00000411243 107 ntBASIC-1.36□□□□□ -2.63
CCDC197Q8NCU1 RNU6-732P-201ENST00000516033 103 ntBASIC-1.36□□□□□ -2.63
CCDC197Q8NCU1 RNU7-174P-201ENST00000516248 59 ntBASIC-1.36□□□□□ -2.63
CCDC197Q8NCU1 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.36□□□□□ -2.63
CCDC197Q8NCU1 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.37□□□□□ -2.63
CCDC197Q8NCU1 RNU6-168P-201ENST00000516189 101 ntBASIC-1.37□□□□□ -2.63
CCDC197Q8NCU1 RNU6-982P-201ENST00000516216 102 ntBASIC-1.37□□□□□ -2.63
CCDC197Q8NCU1 snoMBII-202.2-201ENST00000517263 86 ntBASIC-1.37□□□□□ -2.63
CCDC197Q8NCU1 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.38□□□□□ -2.63
CCDC197Q8NCU1 U7.5-201ENST00000517224 61 ntBASIC-1.38□□□□□ -2.63
CCDC197Q8NCU1 RNU6-1131P-201ENST00000364955 107 ntBASIC-1.39□□□□□ -2.63
CCDC197Q8NCU1 RNU6-49P-201ENST00000384256 107 ntBASIC-1.39□□□□□ -2.63
CCDC197Q8NCU1 RNU6-380P-201ENST00000410207 107 ntBASIC-1.39□□□□□ -2.63
CCDC197Q8NCU1 RNA5SP89-201ENST00000410300 108 ntBASIC-1.39□□□□□ -2.63
CCDC197Q8NCU1 AL353691.2-201ENST00000443795 59 ntBASIC-1.39□□□□□ -2.63
CCDC197Q8NCU1 RNA5SP67-201ENST00000516422 131 ntBASIC-1.39□□□□□ -2.63
CCDC197Q8NCU1 MIR548AI-201ENST00000579940 88 ntBASIC-1.39□□□□□ -2.63
CCDC197Q8NCU1 MIR4484-201ENST00000582855 83 ntBASIC-1.39□□□□□ -2.63
CCDC197Q8NCU1 RNU6-315P-201ENST00000362666 107 ntBASIC-1.41□□□□□ -2.64
CCDC197Q8NCU1 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.41□□□□□ -2.64
CCDC197Q8NCU1 MIR29B1-201ENST00000385015 81 ntBASIC-1.41□□□□□ -2.64
CCDC197Q8NCU1 RNU7-88P-201ENST00000458752 63 ntBASIC-1.41□□□□□ -2.64
CCDC197Q8NCU1 RNY1P9-201ENST00000532431 109 ntBASIC-1.41□□□□□ -2.64
CCDC197Q8NCU1 Y_RNA.291-201ENST00000364886 113 ntBASIC-1.42□□□□□ -2.64
CCDC197Q8NCU1 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.42□□□□□ -2.64
CCDC197Q8NCU1 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.42□□□□□ -2.64
CCDC197Q8NCU1 RNY1P1-201ENST00000364372 112 ntBASIC-1.43□□□□□ -2.64
CCDC197Q8NCU1 MIR5588-201ENST00000581890 63 ntBASIC-1.43□□□□□ -2.64
CCDC197Q8NCU1 IGLL4P-201ENST00000614590 133 ntBASIC-1.43□□□□□ -2.64
CCDC197Q8NCU1 MIR6738-201ENST00000619620 64 ntBASIC-1.43□□□□□ -2.64
CCDC197Q8NCU1 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.44□□□□□ -2.64
CCDC197Q8NCU1 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.44□□□□□ -2.64
CCDC197Q8NCU1 MIR4324-201ENST00000584846 72 ntBASIC-1.44□□□□□ -2.64
CCDC197Q8NCU1 RNU6-979P-201ENST00000383896 107 ntBASIC-1.45□□□□□ -2.64
CCDC197Q8NCU1 RNU6-587P-201ENST00000391282 106 ntBASIC-1.45□□□□□ -2.64
CCDC197Q8NCU1 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.45□□□□□ -2.64
CCDC197Q8NCU1 MIR8053-201ENST00000613344 75 ntBASIC-1.45□□□□□ -2.64
CCDC197Q8NCU1 MIR6818-201ENST00000621576 65 ntBASIC-1.45□□□□□ -2.64
CCDC197Q8NCU1 RNU6-698P-201ENST00000363523 107 ntBASIC-1.46□□□□□ -2.64
CCDC197Q8NCU1 RNU6-34P-201ENST00000364874 107 ntBASIC-1.46□□□□□ -2.64
CCDC197Q8NCU1 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.46□□□□□ -2.64
CCDC197Q8NCU1 RNU6-458P-201ENST00000384179 107 ntBASIC-1.46□□□□□ -2.64
CCDC197Q8NCU1 SNORD19-201ENST00000391191 68 ntBASIC-1.46□□□□□ -2.64
CCDC197Q8NCU1 U6.58-201ENST00000613107 107 ntBASIC-1.46□□□□□ -2.64
CCDC197Q8NCU1 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.47□□□□□ -2.64
CCDC197Q8NCU1 MTND4LP1-201ENST00000446263 157 ntBASIC-1.47□□□□□ -2.64
CCDC197Q8NCU1 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.48□□□□□ -2.65
CCDC197Q8NCU1 AP002795.1-201ENST00000534879 84 ntBASIC-1.48□□□□□ -2.65
CCDC197Q8NCU1 U4.4-201ENST00000620626 117 ntBASIC-1.48□□□□□ -2.65
CCDC197Q8NCU1 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.48□□□□□ -2.65
CCDC197Q8NCU1 U2.22-201ENST00000636441 106 ntBASIC-1.48□□□□□ -2.65
CCDC197Q8NCU1 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.49□□□□□ -2.65
CCDC197Q8NCU1 RNU6-10P-201ENST00000384036 107 ntBASIC-1.49□□□□□ -2.65
CCDC197Q8NCU1 MIR587-201ENST00000384845 96 ntBASIC-1.49□□□□□ -2.65
CCDC197Q8NCU1 MIR5683-201ENST00000636514 76 ntBASIC-1.49□□□□□ -2.65
CCDC197Q8NCU1 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.5□□□□□ -2.65
CCDC197Q8NCU1 RNU7-171P-201ENST00000459581 62 ntBASIC-1.5□□□□□ -2.65
CCDC197Q8NCU1 MIR429-201ENST00000362106 83 ntBASIC-1.51□□□□□ -2.65
CCDC197Q8NCU1 RNA5SP26-201ENST00000362406 119 ntBASIC-1.51□□□□□ -2.65
CCDC197Q8NCU1 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.51□□□□□ -2.65
CCDC197Q8NCU1 SNORD113.1-201ENST00000363280 73 ntBASIC-1.51□□□□□ -2.65
CCDC197Q8NCU1 RNA5SP215-201ENST00000363440 122 ntBASIC-1.51□□□□□ -2.65
CCDC197Q8NCU1 MIR507-201ENST00000385234 94 ntBASIC-1.51□□□□□ -2.65
CCDC197Q8NCU1 MIR527-201ENST00000385244 85 ntBASIC-1.51□□□□□ -2.65
CCDC197Q8NCU1 MIR4490-201ENST00000582647 84 ntBASIC-1.51□□□□□ -2.65
CCDC197Q8NCU1 MIR548V-201ENST00000584165 80 ntBASIC-1.51□□□□□ -2.65
CCDC197Q8NCU1 RNU6-153P-201ENST00000364422 104 ntBASIC-1.52□□□□□ -2.65
CCDC197Q8NCU1 MIR664A-201ENST00000626086 82 ntBASIC-1.52□□□□□ -2.65
CCDC197Q8NCU1 RNU6-668P-201ENST00000364180 107 ntBASIC-1.53□□□□□ -2.65
CCDC197Q8NCU1 SNORD45A-201ENST00000384512 84 ntBASIC-1.53□□□□□ -2.65
CCDC197Q8NCU1 RNU6-696P-201ENST00000390834 107 ntBASIC-1.53□□□□□ -2.65
CCDC197Q8NCU1 RNY4P30-201ENST00000410216 95 ntBASIC-1.53□□□□□ -2.65
CCDC197Q8NCU1 MIR4712-201ENST00000583750 82 ntBASIC-1.53□□□□□ -2.65
CCDC197Q8NCU1 Y_RNA.109-201ENST00000363215 102 ntBASIC-1.54□□□□□ -2.66
CCDC197Q8NCU1 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.54□□□□□ -2.66
CCDC197Q8NCU1 SNORD57-201ENST00000448188 72 ntBASIC-1.54□□□□□ -2.66
CCDC197Q8NCU1 RNU7-134P-201ENST00000458997 64 ntBASIC-1.54□□□□□ -2.66
CCDC197Q8NCU1 MIR378F-201ENST00000578143 78 ntBASIC-1.54□□□□□ -2.66
CCDC197Q8NCU1 MIR1245B-201ENST00000636115 69 ntBASIC-1.54□□□□□ -2.66
CCDC197Q8NCU1 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.55□□□□□ -2.66
CCDC197Q8NCU1 RNU6-576P-201ENST00000390854 102 ntBASIC-1.56□□□□□ -2.66
CCDC197Q8NCU1 RNU6-1262P-201ENST00000516217 96 ntBASIC-1.56□□□□□ -2.66
CCDC197Q8NCU1 MIR630-201ENST00000384957 97 ntBASIC-1.57□□□□□ -2.66
CCDC197Q8NCU1 MIR548Q-201ENST00000408404 100 ntBASIC-1.57□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms