Protein–RNA interactions for Protein: Q8IWP9

CCDC28A, Coiled-coil domain-containing protein 28A, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28AQ8IWP9 SNORD114-14-201ENST00000362723 75 ntBASIC-0.71□□□□□ -2.52
CCDC28AQ8IWP9 SNORD22.1-201ENST00000516331 125 ntBASIC-0.71□□□□□ -2.52
CCDC28AQ8IWP9 MIR3179-1-201ENST00000578940 84 ntBASIC-0.71□□□□□ -2.52
CCDC28AQ8IWP9 MIR3179-2-201ENST00000579107 84 ntBASIC-0.71□□□□□ -2.52
CCDC28AQ8IWP9 MIR3179-3-201ENST00000579566 84 ntBASIC-0.71□□□□□ -2.52
CCDC28AQ8IWP9 MIR3179-4-201ENST00000617599 84 ntBASIC-0.71□□□□□ -2.52
CCDC28AQ8IWP9 RNU6-573P-201ENST00000383938 106 ntBASIC-0.72□□□□□ -2.52
CCDC28AQ8IWP9 RNA5SP451-201ENST00000410588 110 ntBASIC-0.72□□□□□ -2.52
CCDC28AQ8IWP9 MIR4464-201ENST00000580818 92 ntBASIC-0.72□□□□□ -2.52
CCDC28AQ8IWP9 SNORD113.1-201ENST00000363280 73 ntBASIC-0.73□□□□□ -2.53
CCDC28AQ8IWP9 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.73□□□□□ -2.53
CCDC28AQ8IWP9 SNORA3B-201ENST00000391305 131 ntBASIC-0.73□□□□□ -2.53
CCDC28AQ8IWP9 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.73□□□□□ -2.53
CCDC28AQ8IWP9 MIR4493-201ENST00000584016 73 ntBASIC-0.73□□□□□ -2.53
CCDC28AQ8IWP9 SNORD45A-201ENST00000384512 84 ntBASIC-0.74□□□□□ -2.53
CCDC28AQ8IWP9 MIR154-201ENST00000385243 84 ntBASIC-0.74□□□□□ -2.53
CCDC28AQ8IWP9 SNORD75.1-201ENST00000408373 60 ntBASIC-0.74□□□□□ -2.53
CCDC28AQ8IWP9 AL445584.3-201ENST00000617173 78 ntBASIC-0.74□□□□□ -2.53
CCDC28AQ8IWP9 MIR6888-201ENST00000621977 67 ntBASIC-0.74□□□□□ -2.53
CCDC28AQ8IWP9 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.75□□□□□ -2.53
CCDC28AQ8IWP9 MIR124-2-201ENST00000385081 109 ntBASIC-0.75□□□□□ -2.53
CCDC28AQ8IWP9 MIR4636-201ENST00000582271 80 ntBASIC-0.75□□□□□ -2.53
CCDC28AQ8IWP9 RNU6-668P-201ENST00000364180 107 ntBASIC-0.76□□□□□ -2.53
CCDC28AQ8IWP9 RNU6-587P-201ENST00000391282 106 ntBASIC-0.76□□□□□ -2.53
CCDC28AQ8IWP9 AC108676.2-201ENST00000605225 163 ntBASIC-0.76□□□□□ -2.53
CCDC28AQ8IWP9 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.76□□□□□ -2.53
CCDC28AQ8IWP9 MIR4679-1-201ENST00000637619 75 ntBASIC-0.76□□□□□ -2.53
CCDC28AQ8IWP9 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.77□□□□□ -2.53
CCDC28AQ8IWP9 RPS29P8-201ENST00000445109 171 ntBASIC-0.77□□□□□ -2.53
CCDC28AQ8IWP9 U7.4-201ENST00000614961 63 ntBASIC-0.77□□□□□ -2.53
CCDC28AQ8IWP9 MIR517B-201ENST00000385102 67 ntBASIC-0.78□□□□□ -2.53
CCDC28AQ8IWP9 SNORD18.2-201ENST00000459604 70 ntBASIC-0.78□□□□□ -2.53
CCDC28AQ8IWP9 RNU7-174P-201ENST00000516248 59 ntBASIC-0.78□□□□□ -2.53
CCDC28AQ8IWP9 MIR3134-201ENST00000579433 74 ntBASIC-0.78□□□□□ -2.53
CCDC28AQ8IWP9 RNU6-228P-201ENST00000362700 106 ntBASIC-0.79□□□□□ -2.54
CCDC28AQ8IWP9 RNU6-924P-201ENST00000362926 108 ntBASIC-0.79□□□□□ -2.54
CCDC28AQ8IWP9 MIR604-201ENST00000384880 94 ntBASIC-0.79□□□□□ -2.54
CCDC28AQ8IWP9 RNA5SP215-201ENST00000363440 122 ntBASIC-0.8□□□□□ -2.54
CCDC28AQ8IWP9 RNU6-895P-201ENST00000384125 103 ntBASIC-0.8□□□□□ -2.54
CCDC28AQ8IWP9 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.8□□□□□ -2.54
CCDC28AQ8IWP9 RNU6-411P-201ENST00000384451 107 ntBASIC-0.8□□□□□ -2.54
CCDC28AQ8IWP9 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.8□□□□□ -2.54
CCDC28AQ8IWP9 RNU6-721P-201ENST00000410155 105 ntBASIC-0.8□□□□□ -2.54
CCDC28AQ8IWP9 AP000533.3-201ENST00000447704 118 ntBASIC-0.8□□□□□ -2.54
CCDC28AQ8IWP9 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.81□□□□□ -2.54
CCDC28AQ8IWP9 MIR1255A-201ENST00000408338 113 ntBASIC-0.81□□□□□ -2.54
CCDC28AQ8IWP9 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.81□□□□□ -2.54
CCDC28AQ8IWP9 RNU6-279P-201ENST00000391297 101 ntBASIC-0.82□□□□□ -2.54
CCDC28AQ8IWP9 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.83□□□□□ -2.54
CCDC28AQ8IWP9 RNU6-698P-201ENST00000363523 107 ntBASIC-0.83□□□□□ -2.54
CCDC28AQ8IWP9 RNU6-34P-201ENST00000364874 107 ntBASIC-0.83□□□□□ -2.54
CCDC28AQ8IWP9 RNU6-24P-201ENST00000384440 107 ntBASIC-0.83□□□□□ -2.54
CCDC28AQ8IWP9 SNORD78.1-201ENST00000390866 65 ntBASIC-0.83□□□□□ -2.54
CCDC28AQ8IWP9 RNU6-857P-201ENST00000515893 110 ntBASIC-0.83□□□□□ -2.54
CCDC28AQ8IWP9 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.84□□□□□ -2.54
CCDC28AQ8IWP9 RNU6-758P-201ENST00000516292 89 ntBASIC-0.84□□□□□ -2.54
CCDC28AQ8IWP9 RNU6-687P-201ENST00000516443 89 ntBASIC-0.84□□□□□ -2.54
CCDC28AQ8IWP9 MIR4436A-201ENST00000585278 85 ntBASIC-0.84□□□□□ -2.54
CCDC28AQ8IWP9 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.85□□□□□ -2.55
CCDC28AQ8IWP9 MIR224-201ENST00000384889 81 ntBASIC-0.85□□□□□ -2.55
CCDC28AQ8IWP9 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.85□□□□□ -2.55
CCDC28AQ8IWP9 Z95118.1-201ENST00000421372 247 ntBASIC-0.87□□□□□ -2.55
CCDC28AQ8IWP9 MIR548V-201ENST00000584165 80 ntBASIC-0.87□□□□□ -2.55
CCDC28AQ8IWP9 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.88□□□□□ -2.55
CCDC28AQ8IWP9 SNORD115-31-201ENST00000365318 82 ntBASIC-0.88□□□□□ -2.55
CCDC28AQ8IWP9 MIR1265-201ENST00000408444 86 ntBASIC-0.89□□□□□ -2.55
CCDC28AQ8IWP9 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.89□□□□□ -2.55
CCDC28AQ8IWP9 RNA5SP368-201ENST00000364298 116 ntBASIC-0.9□□□□□ -2.55
CCDC28AQ8IWP9 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.9□□□□□ -2.55
CCDC28AQ8IWP9 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.9□□□□□ -2.55
CCDC28AQ8IWP9 MIR548AG1-201ENST00000579932 66 ntBASIC-0.9□□□□□ -2.55
CCDC28AQ8IWP9 RNU6-35P-201ENST00000384530 107 ntBASIC-0.91□□□□□ -2.56
CCDC28AQ8IWP9 SNORD113-2-201ENST00000391082 72 ntBASIC-0.91□□□□□ -2.56
CCDC28AQ8IWP9 U4.4-201ENST00000620626 117 ntBASIC-0.91□□□□□ -2.56
CCDC28AQ8IWP9 MIR429-201ENST00000362106 83 ntBASIC-0.92□□□□□ -2.56
CCDC28AQ8IWP9 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.92□□□□□ -2.56
CCDC28AQ8IWP9 SNORD116-24-201ENST00000384549 92 ntBASIC-0.92□□□□□ -2.56
CCDC28AQ8IWP9 MIR630-201ENST00000384957 97 ntBASIC-0.93□□□□□ -2.56
CCDC28AQ8IWP9 MIR527-201ENST00000385244 85 ntBASIC-0.93□□□□□ -2.56
CCDC28AQ8IWP9 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.94□□□□□ -2.56
CCDC28AQ8IWP9 SNORD114-17-201ENST00000364699 75 ntBASIC-0.94□□□□□ -2.56
CCDC28AQ8IWP9 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.94□□□□□ -2.56
CCDC28AQ8IWP9 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.94□□□□□ -2.56
CCDC28AQ8IWP9 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.94□□□□□ -2.56
CCDC28AQ8IWP9 RNA5SP225-201ENST00000410874 135 ntBASIC-0.94□□□□□ -2.56
CCDC28AQ8IWP9 RNU6-634P-201ENST00000459134 106 ntBASIC-0.94□□□□□ -2.56
CCDC28AQ8IWP9 RNU6-246P-201ENST00000384702 107 ntBASIC-0.95□□□□□ -2.56
CCDC28AQ8IWP9 RNA5SP395-201ENST00000516567 118 ntBASIC-0.95□□□□□ -2.56
CCDC28AQ8IWP9 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.96□□□□□ -2.56
CCDC28AQ8IWP9 RNU6-458P-201ENST00000384179 107 ntBASIC-0.96□□□□□ -2.56
CCDC28AQ8IWP9 U6.58-201ENST00000613107 107 ntBASIC-0.96□□□□□ -2.56
CCDC28AQ8IWP9 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.97□□□□□ -2.56
CCDC28AQ8IWP9 RNU4-63P-201ENST00000411313 118 ntBASIC-0.97□□□□□ -2.56
CCDC28AQ8IWP9 SNORD95.1-201ENST00000364099 68 ntBASIC-0.98□□□□□ -2.57
CCDC28AQ8IWP9 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.98□□□□□ -2.57
CCDC28AQ8IWP9 SNORA26.4-201ENST00000391188 123 ntBASIC-0.98□□□□□ -2.57
CCDC28AQ8IWP9 RNU6-871P-201ENST00000516122 100 ntBASIC-0.98□□□□□ -2.57
CCDC28AQ8IWP9 MT-TQ-201ENST00000387372 72 ntBASIC-0.99□□□□□ -2.57
CCDC28AQ8IWP9 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.99□□□□□ -2.57
CCDC28AQ8IWP9 U7.5-201ENST00000517224 61 ntBASIC-0.99□□□□□ -2.57
Retrieved 100 of 98,524 protein–RNA pairs in 7.8 ms