Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 IGLVI-20-201ENST00000519296 130 ntBASIC-0.04□□□□□ -2.42
NHLRC1Q6VVB1 MIR4280-201ENST00000582178 76 ntBASIC-0.04□□□□□ -2.42
NHLRC1Q6VVB1 MIR6888-201ENST00000621977 67 ntBASIC-0.04□□□□□ -2.42
NHLRC1Q6VVB1 RNU6-668P-201ENST00000364180 107 ntBASIC-0.05□□□□□ -2.42
NHLRC1Q6VVB1 RNU6-973P-201ENST00000364690 107 ntBASIC-0.05□□□□□ -2.42
NHLRC1Q6VVB1 SNORD49B-201ENST00000365172 72 ntBASIC-0.05□□□□□ -2.42
NHLRC1Q6VVB1 RNU6-895P-201ENST00000384125 103 ntBASIC-0.05□□□□□ -2.42
NHLRC1Q6VVB1 MIR630-201ENST00000384957 97 ntBASIC-0.05□□□□□ -2.42
NHLRC1Q6VVB1 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.05□□□□□ -2.42
NHLRC1Q6VVB1 RNU6-630P-201ENST00000391258 106 ntBASIC-0.05□□□□□ -2.42
NHLRC1Q6VVB1 SNORD30.1-201ENST00000391309 70 ntBASIC-0.05□□□□□ -2.42
NHLRC1Q6VVB1 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.05□□□□□ -2.42
NHLRC1Q6VVB1 AC114801.3-201ENST00000510231 177 ntBASIC-0.05□□□□□ -2.42
NHLRC1Q6VVB1 MIR548V-201ENST00000584165 80 ntBASIC-0.05□□□□□ -2.42
NHLRC1Q6VVB1 AL353803.5-201ENST00000599815 141 ntBASIC-0.05□□□□□ -2.42
NHLRC1Q6VVB1 AL391099.1-201ENST00000624635 187 ntBASIC-0.05□□□□□ -2.42
NHLRC1Q6VVB1 U6.111-201ENST00000636093 83 ntBASIC-0.05□□□□□ -2.42
NHLRC1Q6VVB1 SNORD114-31-201ENST00000363219 75 ntBASIC-0.06□□□□□ -2.42
NHLRC1Q6VVB1 RNU6-649P-201ENST00000384463 107 ntBASIC-0.06□□□□□ -2.42
NHLRC1Q6VVB1 MTND4LP1-201ENST00000446263 157 ntBASIC-0.06□□□□□ -2.42
NHLRC1Q6VVB1 MIR4432-201ENST00000581823 84 ntBASIC-0.06□□□□□ -2.42
NHLRC1Q6VVB1 MIR4802-201ENST00000581881 80 ntBASIC-0.06□□□□□ -2.42
NHLRC1Q6VVB1 RNU6-46P-201ENST00000383860 107 ntBASIC-0.07□□□□□ -2.42
NHLRC1Q6VVB1 SNORA41B-201ENST00000384785 128 ntBASIC-0.07□□□□□ -2.42
NHLRC1Q6VVB1 MIR548C-201ENST00000384815 97 ntBASIC-0.07□□□□□ -2.42
NHLRC1Q6VVB1 RNU7-154P-201ENST00000516194 62 ntBASIC-0.07□□□□□ -2.42
NHLRC1Q6VVB1 RNU6-539P-201ENST00000516665 103 ntBASIC-0.07□□□□□ -2.42
NHLRC1Q6VVB1 MIR1295B-201ENST00000636144 60 ntBASIC-0.07□□□□□ -2.42
NHLRC1Q6VVB1 RNU6-698P-201ENST00000363523 107 ntBASIC-0.08□□□□□ -2.42
NHLRC1Q6VVB1 RNU6-34P-201ENST00000364874 107 ntBASIC-0.08□□□□□ -2.42
NHLRC1Q6VVB1 RNU6-800P-201ENST00000384473 103 ntBASIC-0.08□□□□□ -2.42
NHLRC1Q6VVB1 RNU6-246P-201ENST00000384702 107 ntBASIC-0.08□□□□□ -2.42
NHLRC1Q6VVB1 MIR517B-201ENST00000385102 67 ntBASIC-0.08□□□□□ -2.42
NHLRC1Q6VVB1 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.08□□□□□ -2.42
NHLRC1Q6VVB1 SNORD113-2-201ENST00000391082 72 ntBASIC-0.08□□□□□ -2.42
NHLRC1Q6VVB1 AL445193.1-201ENST00000441183 141 ntBASIC-0.08□□□□□ -2.42
NHLRC1Q6VVB1 AL021921.1-201ENST00000442774 93 ntBASIC-0.08□□□□□ -2.42
NHLRC1Q6VVB1 AC139453.2-201ENST00000487255 133 ntBASIC-0.08□□□□□ -2.42
NHLRC1Q6VVB1 RNU6-871P-201ENST00000516122 100 ntBASIC-0.08□□□□□ -2.42
NHLRC1Q6VVB1 SNORD38.3-201ENST00000516599 73 ntBASIC-0.08□□□□□ -2.42
NHLRC1Q6VVB1 RNA5SP169-201ENST00000517268 117 ntBASIC-0.08□□□□□ -2.42
NHLRC1Q6VVB1 AL445584.3-201ENST00000617173 78 ntBASIC-0.08□□□□□ -2.42
NHLRC1Q6VVB1 RNA5SP215-201ENST00000363440 122 ntBASIC-0.09□□□□□ -2.42
NHLRC1Q6VVB1 SNORA25.4-201ENST00000363666 124 ntBASIC-0.09□□□□□ -2.42
NHLRC1Q6VVB1 SNORD114-11-201ENST00000363738 75 ntBASIC-0.09□□□□□ -2.42
NHLRC1Q6VVB1 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.09□□□□□ -2.42
NHLRC1Q6VVB1 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.09□□□□□ -2.42
NHLRC1Q6VVB1 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.09□□□□□ -2.42
NHLRC1Q6VVB1 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.09□□□□□ -2.42
NHLRC1Q6VVB1 Z95118.1-201ENST00000421372 247 ntBASIC-0.09□□□□□ -2.42
NHLRC1Q6VVB1 AC104692.1-201ENST00000472406 90 ntBASIC-0.09□□□□□ -2.42
NHLRC1Q6VVB1 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.09□□□□□ -2.42
NHLRC1Q6VVB1 SNORD114-12-201ENST00000365400 75 ntBASIC-0.1□□□□□ -2.43
NHLRC1Q6VVB1 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.1□□□□□ -2.43
NHLRC1Q6VVB1 RNA5SP470-201ENST00000516463 106 ntBASIC-0.11□□□□□ -2.43
NHLRC1Q6VVB1 MIR4511-201ENST00000582784 87 ntBASIC-0.11□□□□□ -2.43
NHLRC1Q6VVB1 MIR6854-201ENST00000614935 69 ntBASIC-0.11□□□□□ -2.43
NHLRC1Q6VVB1 MIR6851-201ENST00000617060 67 ntBASIC-0.11□□□□□ -2.43
NHLRC1Q6VVB1 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.11□□□□□ -2.43
NHLRC1Q6VVB1 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.12□□□□□ -2.43
NHLRC1Q6VVB1 SNORA18.1-201ENST00000363418 128 ntBASIC-0.12□□□□□ -2.43
NHLRC1Q6VVB1 SNORA32.1-201ENST00000364514 115 ntBASIC-0.12□□□□□ -2.43
NHLRC1Q6VVB1 snoU13.19-201ENST00000459148 104 ntBASIC-0.12□□□□□ -2.43
NHLRC1Q6VVB1 SNORD4A-201ENST00000459174 72 ntBASIC-0.12□□□□□ -2.43
NHLRC1Q6VVB1 RNU6-542P-201ENST00000516405 103 ntBASIC-0.12□□□□□ -2.43
NHLRC1Q6VVB1 snoR1.1-201ENST00000628177 80 ntBASIC-0.12□□□□□ -2.43
NHLRC1Q6VVB1 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.13□□□□□ -2.43
NHLRC1Q6VVB1 RNA5SP192-201ENST00000364404 120 ntBASIC-0.13□□□□□ -2.43
NHLRC1Q6VVB1 RNA5SP300-201ENST00000391197 107 ntBASIC-0.13□□□□□ -2.43
NHLRC1Q6VVB1 RNU6-758P-201ENST00000516292 89 ntBASIC-0.13□□□□□ -2.43
NHLRC1Q6VVB1 AC108676.2-201ENST00000605225 163 ntBASIC-0.13□□□□□ -2.43
NHLRC1Q6VVB1 MIR3666-201ENST00000607845 111 ntBASIC-0.13□□□□□ -2.43
NHLRC1Q6VVB1 RNU6-901P-201ENST00000384593 106 ntBASIC-0.14□□□□□ -2.43
NHLRC1Q6VVB1 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.14□□□□□ -2.43
NHLRC1Q6VVB1 RNA5SP66-201ENST00000517178 101 ntBASIC-0.14□□□□□ -2.43
NHLRC1Q6VVB1 SNORD60.1-201ENST00000362451 73 ntBASIC-0.15□□□□□ -2.43
NHLRC1Q6VVB1 RNU6-471P-201ENST00000383944 106 ntBASIC-0.15□□□□□ -2.43
NHLRC1Q6VVB1 RNU6-458P-201ENST00000384179 107 ntBASIC-0.15□□□□□ -2.43
NHLRC1Q6VVB1 MIR124-2-201ENST00000385081 109 ntBASIC-0.15□□□□□ -2.43
NHLRC1Q6VVB1 MIR214-201ENST00000385214 110 ntBASIC-0.15□□□□□ -2.43
NHLRC1Q6VVB1 AC110620.1-201ENST00000416042 228 ntBASIC-0.15□□□□□ -2.43
NHLRC1Q6VVB1 AP001180.6-201ENST00000584918 159 ntBASIC-0.15□□□□□ -2.43
NHLRC1Q6VVB1 U6.58-201ENST00000613107 107 ntBASIC-0.15□□□□□ -2.43
NHLRC1Q6VVB1 MIR4788-201ENST00000639104 80 ntBASIC-0.15□□□□□ -2.43
NHLRC1Q6VVB1 SNORA25.5-201ENST00000363782 126 ntBASIC-0.16□□□□□ -2.44
NHLRC1Q6VVB1 RNU6-598P-201ENST00000364017 105 ntBASIC-0.16□□□□□ -2.44
NHLRC1Q6VVB1 RNA5SP368-201ENST00000364298 116 ntBASIC-0.16□□□□□ -2.44
NHLRC1Q6VVB1 SNORD116-16-201ENST00000384533 92 ntBASIC-0.16□□□□□ -2.44
NHLRC1Q6VVB1 RNU6-721P-201ENST00000410155 105 ntBASIC-0.16□□□□□ -2.44
NHLRC1Q6VVB1 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.16□□□□□ -2.44
NHLRC1Q6VVB1 U7.5-201ENST00000517224 61 ntBASIC-0.16□□□□□ -2.44
NHLRC1Q6VVB1 RNU6-92P-201ENST00000605893 104 ntBASIC-0.16□□□□□ -2.44
NHLRC1Q6VVB1 SNORD1B-201ENST00000363091 84 ntBASIC-0.17□□□□□ -2.44
NHLRC1Q6VVB1 SNORA62.4-201ENST00000365504 151 ntBASIC-0.17□□□□□ -2.44
NHLRC1Q6VVB1 MIR527-201ENST00000385244 85 ntBASIC-0.17□□□□□ -2.44
NHLRC1Q6VVB1 RNA5SP25-201ENST00000410815 110 ntBASIC-0.17□□□□□ -2.44
NHLRC1Q6VVB1 RNU7-88P-201ENST00000458752 63 ntBASIC-0.17□□□□□ -2.44
NHLRC1Q6VVB1 SNORD22.1-201ENST00000516331 125 ntBASIC-0.17□□□□□ -2.44
NHLRC1Q6VVB1 U2.18-201ENST00000622185 84 ntBASIC-0.17□□□□□ -2.44
NHLRC1Q6VVB1 AC103706.3-201ENST00000636297 85 ntBASIC-0.17□□□□□ -2.44
Retrieved 100 of 98,524 protein–RNA pairs in 182.1 ms