Protein–RNA interactions for Protein: Q53F19

NCBP3, Nuclear cap-binding protein subunit 3, humanhuman

Known RBP Predictions only

Length 620 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3Q53F19 SNORD44.1-201ENST00000363202 61 ntBASIC1.53□□□□□ -2.16
NCBP3Q53F19 RNU6-1238P-201ENST00000517215 102 ntBASIC1.51□□□□□ -2.17
NCBP3Q53F19 MIR4653-201ENST00000585107 83 ntBASIC1.51□□□□□ -2.17
NCBP3Q53F19 uc_338.17-201ENST00000619633 179 ntBASIC1.5□□□□□ -2.17
NCBP3Q53F19 RNU6-42P-201ENST00000384165 107 ntBASIC1.49□□□□□ -2.17
NCBP3Q53F19 MIR548Q-201ENST00000408404 100 ntBASIC1.49□□□□□ -2.17
NCBP3Q53F19 RNA5SP220-201ENST00000516298 104 ntBASIC1.49□□□□□ -2.17
NCBP3Q53F19 MIR548H4-201ENST00000408689 111 ntBASIC1.48□□□□□ -2.17
NCBP3Q53F19 RNU6-732P-201ENST00000516033 103 ntBASIC1.48□□□□□ -2.17
NCBP3Q53F19 AC104408.1-201ENST00000605241 170 ntBASIC1.48□□□□□ -2.17
NCBP3Q53F19 MIR96-201ENST00000362288 78 ntBASIC1.47□□□□□ -2.17
NCBP3Q53F19 RNU6-900P-201ENST00000384498 102 ntBASIC1.47□□□□□ -2.17
NCBP3Q53F19 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.47□□□□□ -2.17
NCBP3Q53F19 MIR5704-201ENST00000584029 77 ntBASIC1.47□□□□□ -2.17
NCBP3Q53F19 RNU6-59P-201ENST00000384787 107 ntBASIC1.46□□□□□ -2.18
NCBP3Q53F19 AC096531.1-201ENST00000419107 107 ntBASIC1.46□□□□□ -2.18
NCBP3Q53F19 RPL39P28-201ENST00000465655 155 ntBASIC1.46□□□□□ -2.18
NCBP3Q53F19 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC1.45□□□□□ -2.18
NCBP3Q53F19 RPS29P1-201ENST00000465274 159 ntBASIC1.44□□□□□ -2.18
NCBP3Q53F19 RNU6-127P-201ENST00000390897 107 ntBASIC1.43□□□□□ -2.18
NCBP3Q53F19 RNU6-455P-201ENST00000384681 107 ntBASIC1.42□□□□□ -2.18
NCBP3Q53F19 MIR1468-201ENST00000410600 86 ntBASIC1.42□□□□□ -2.18
NCBP3Q53F19 MIR6514-201ENST00000622549 70 ntBASIC1.42□□□□□ -2.18
NCBP3Q53F19 MIR124-2-201ENST00000385081 109 ntBASIC1.41□□□□□ -2.18
NCBP3Q53F19 MIR8068-201ENST00000618032 68 ntBASIC1.41□□□□□ -2.18
NCBP3Q53F19 RNU6-258P-201ENST00000390884 101 ntBASIC1.4□□□□□ -2.19
NCBP3Q53F19 MIR520E-201ENST00000384867 87 ntBASIC1.39□□□□□ -2.19
NCBP3Q53F19 MIR103A1-201ENST00000362165 78 ntBASIC1.38□□□□□ -2.19
NCBP3Q53F19 MIR643-201ENST00000385267 97 ntBASIC1.38□□□□□ -2.19
NCBP3Q53F19 MIR548J-201ENST00000408833 112 ntBASIC1.38□□□□□ -2.19
NCBP3Q53F19 AC087343.1-201ENST00000477341 475 ntBASIC1.37□□□□□ -2.19
NCBP3Q53F19 Y_RNA.699-201ENST00000516803 93 ntBASIC1.37□□□□□ -2.19
NCBP3Q53F19 MIR4295-201ENST00000585286 85 ntBASIC1.37□□□□□ -2.19
NCBP3Q53F19 AC103810.9-201ENST00000606688 112 ntBASIC1.37□□□□□ -2.19
NCBP3Q53F19 MIR1285-1-201ENST00000408593 84 ntBASIC1.36□□□□□ -2.19
NCBP3Q53F19 SNORD114-21-201ENST00000606412 72 ntBASIC1.36□□□□□ -2.19
NCBP3Q53F19 RNU4-38P-201ENST00000364472 129 ntBASIC1.34□□□□□ -2.19
NCBP3Q53F19 RNU6ATAC22P-201ENST00000516794 89 ntBASIC1.34□□□□□ -2.19
NCBP3Q53F19 MIR6854-201ENST00000614935 69 ntBASIC1.34□□□□□ -2.19
NCBP3Q53F19 MIR6515-201ENST00000619843 57 ntBASIC1.34□□□□□ -2.19
NCBP3Q53F19 RNU1-93P-201ENST00000364704 169 ntBASIC1.33□□□□□ -2.2
NCBP3Q53F19 MIR4317-201ENST00000637586 65 ntBASIC1.33□□□□□ -2.2
NCBP3Q53F19 MIR520D-201ENST00000385002 87 ntBASIC1.32□□□□□ -2.2
NCBP3Q53F19 MIR151B-201ENST00000584249 96 ntBASIC1.32□□□□□ -2.2
NCBP3Q53F19 SNORD19-201ENST00000391191 68 ntBASIC1.31□□□□□ -2.2
NCBP3Q53F19 RNU6-1326P-201ENST00000391262 107 ntBASIC1.31□□□□□ -2.2
NCBP3Q53F19 SNORA68.3-201ENST00000515906 83 ntBASIC1.31□□□□□ -2.2
NCBP3Q53F19 RNU6-815P-201ENST00000384080 113 ntBASIC1.3□□□□□ -2.2
NCBP3Q53F19 MIR6767-201ENST00000637302 66 ntBASIC1.3□□□□□ -2.2
NCBP3Q53F19 RNU6-901P-201ENST00000384593 106 ntBASIC1.29□□□□□ -2.2
NCBP3Q53F19 MIR532-201ENST00000385025 91 ntBASIC1.29□□□□□ -2.2
NCBP3Q53F19 MIR3973-201ENST00000579824 107 ntBASIC1.29□□□□□ -2.2
NCBP3Q53F19 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1.29□□□□□ -2.2
NCBP3Q53F19 SNORA27.2-201ENST00000363365 126 ntBASIC1.28□□□□□ -2.2
NCBP3Q53F19 RNA5SP163-201ENST00000410304 99 ntBASIC1.28□□□□□ -2.2
NCBP3Q53F19 RNA5SP480-201ENST00000516840 109 ntBASIC1.28□□□□□ -2.2
NCBP3Q53F19 CR383656.4-201ENST00000546909 122 ntBASIC1.27□□□□□ -2.21
NCBP3Q53F19 MIR6507-201ENST00000613630 70 ntBASIC1.27□□□□□ -2.21
NCBP3Q53F19 AC022709.1-201ENST00000615967 87 ntBASIC1.27□□□□□ -2.21
NCBP3Q53F19 MIR6788-201ENST00000618842 66 ntBASIC1.27□□□□□ -2.21
NCBP3Q53F19 MIR4426-201ENST00000640330 63 ntBASIC1.27□□□□□ -2.21
NCBP3Q53F19 RNU6-1233P-201ENST00000362922 102 ntBASIC1.26□□□□□ -2.21
NCBP3Q53F19 SNORA42.1-201ENST00000363515 137 ntBASIC1.26□□□□□ -2.21
NCBP3Q53F19 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC1.26□□□□□ -2.21
NCBP3Q53F19 AC138207.3-201ENST00000585289 166 ntBASIC1.26□□□□□ -2.21
NCBP3Q53F19 MIR6857-201ENST00000613267 93 ntBASIC1.26□□□□□ -2.21
NCBP3Q53F19 RNA5SP121-201ENST00000516537 101 ntBASIC1.25□□□□□ -2.21
NCBP3Q53F19 Y_RNA.345-201ENST00000365384 92 ntBASIC1.24□□□□□ -2.21
NCBP3Q53F19 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1.24□□□□□ -2.21
NCBP3Q53F19 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
NCBP3Q53F19 MIR373-201ENST00000362273 69 ntBASIC1.21□□□□□ -2.22
NCBP3Q53F19 RNA5SP62-201ENST00000363457 110 ntBASIC1.19□□□□□ -2.22
NCBP3Q53F19 RNU6-1047P-201ENST00000364418 107 ntBASIC1.19□□□□□ -2.22
NCBP3Q53F19 MIR598-201ENST00000384868 97 ntBASIC1.19□□□□□ -2.22
NCBP3Q53F19 SNORD56B-201ENST00000384713 71 ntBASIC1.18□□□□□ -2.22
NCBP3Q53F19 PVT1_3.1-201ENST00000620853 95 ntBASIC1.18□□□□□ -2.22
NCBP3Q53F19 MIRLET7D-201ENST00000362263 87 ntBASIC1.17□□□□□ -2.22
NCBP3Q53F19 RNA5SP325-201ENST00000363756 130 ntBASIC1.17□□□□□ -2.22
NCBP3Q53F19 MIR146A-201ENST00000385201 99 ntBASIC1.17□□□□□ -2.22
NCBP3Q53F19 RNU6-180P-201ENST00000516697 61 ntBASIC1.17□□□□□ -2.22
NCBP3Q53F19 RNA5SP169-201ENST00000517268 117 ntBASIC1.17□□□□□ -2.22
NCBP3Q53F19 AC114755.3-201ENST00000481111 251 ntBASIC1.16□□□□□ -2.22
NCBP3Q53F19 RNA5SP436-201ENST00000516020 115 ntBASIC1.16□□□□□ -2.22
NCBP3Q53F19 MIR148A-201ENST00000362215 68 ntBASIC1.15□□□□□ -2.23
NCBP3Q53F19 RNU6-351P-201ENST00000516097 100 ntBASIC1.15□□□□□ -2.23
NCBP3Q53F19 MIR4698-201ENST00000577795 80 ntBASIC1.15□□□□□ -2.23
NCBP3Q53F19 MIR6779-201ENST00000617283 64 ntBASIC1.14□□□□□ -2.23
NCBP3Q53F19 Y_RNA.206-201ENST00000364136 102 ntBASIC1.13□□□□□ -2.23
NCBP3Q53F19 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
NCBP3Q53F19 Y_RNA.540-201ENST00000384638 111 ntBASIC1.12□□□□□ -2.23
NCBP3Q53F19 AC069113.3-201ENST00000521019 150 ntBASIC1.12□□□□□ -2.23
NCBP3Q53F19 MIR548H2-201ENST00000408874 88 ntBASIC1.1□□□□□ -2.23
NCBP3Q53F19 AL445193.1-201ENST00000441183 141 ntBASIC1.1□□□□□ -2.23
NCBP3Q53F19 AP002795.1-201ENST00000534879 84 ntBASIC1.09□□□□□ -2.23
NCBP3Q53F19 MIR202-201ENST00000362219 110 ntBASIC1.08□□□□□ -2.24
NCBP3Q53F19 RNY1P9-201ENST00000532431 109 ntBASIC1.08□□□□□ -2.24
NCBP3Q53F19 MIR5000-201ENST00000577717 103 ntBASIC1.08□□□□□ -2.24
NCBP3Q53F19 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC1.07□□□□□ -2.24
NCBP3Q53F19 CYP3A137P-201ENST00000562436 69 ntBASIC1.07□□□□□ -2.24
NCBP3Q53F19 SNORD114-26-201ENST00000363543 72 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms