Protein–RNA interactions for Protein: Q3V6T2

CCDC88A, Girdin, humanhuman

Predictions only

Length 1,871 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88AQ3V6T2 RNU6-426P-201ENST00000516464 97 ntBASIC-2.25□□□□□ -2.77
CCDC88AQ3V6T2 MIR548AG1-201ENST00000579932 66 ntBASIC-2.25□□□□□ -2.77
CCDC88AQ3V6T2 AC012531.4-201ENST00000616509 177 ntBASIC-2.25□□□□□ -2.77
CCDC88AQ3V6T2 RNU6-1107P-201ENST00000364817 104 ntBASIC-2.26□□□□□ -2.77
CCDC88AQ3V6T2 Y_RNA.297-201ENST00000364950 91 ntBASIC-2.26□□□□□ -2.77
CCDC88AQ3V6T2 RNU6-608P-201ENST00000383927 104 ntBASIC-2.26□□□□□ -2.77
CCDC88AQ3V6T2 AL450471.1-201ENST00000447509 127 ntBASIC-2.26□□□□□ -2.77
CCDC88AQ3V6T2 Y_RNA.149-201ENST00000363558 117 ntBASIC-2.26□□□□□ -2.77
CCDC88AQ3V6T2 RNU6-587P-201ENST00000391282 106 ntBASIC-2.26□□□□□ -2.77
CCDC88AQ3V6T2 MTATP8P1-201ENST00000467115 207 ntBASIC-2.26□□□□□ -2.77
CCDC88AQ3V6T2 MTND4LP9-201ENST00000427694 174 ntBASIC-2.27□□□□□ -2.77
CCDC88AQ3V6T2 RNU6-803P-201ENST00000516034 102 ntBASIC-2.27□□□□□ -2.77
CCDC88AQ3V6T2 MIR548AM-201ENST00000584298 74 ntBASIC-2.27□□□□□ -2.77
CCDC88AQ3V6T2 SNORD115-37-201ENST00000363768 82 ntBASIC-2.28□□□□□ -2.77
CCDC88AQ3V6T2 RPL35AP4-201ENST00000412007 102 ntBASIC-2.28□□□□□ -2.77
CCDC88AQ3V6T2 RNU6-182P-201ENST00000516970 105 ntBASIC-2.28□□□□□ -2.77
CCDC88AQ3V6T2 AC005520.4-201ENST00000604337 90 ntBASIC-2.28□□□□□ -2.77
CCDC88AQ3V6T2 Y_RNA.325-201ENST00000365171 122 ntBASIC-2.28□□□□□ -2.78
CCDC88AQ3V6T2 Y_RNA.398-201ENST00000383952 99 ntBASIC-2.28□□□□□ -2.78
CCDC88AQ3V6T2 MIR1297-201ENST00000637311 77 ntBASIC-2.28□□□□□ -2.78
CCDC88AQ3V6T2 Y_RNA.343-201ENST00000365354 112 ntBASIC-2.29□□□□□ -2.78
CCDC88AQ3V6T2 Y_RNA.586-201ENST00000391146 98 ntBASIC-2.29□□□□□ -2.78
CCDC88AQ3V6T2 Y_RNA.489-201ENST00000384410 101 ntBASIC-2.3□□□□□ -2.78
CCDC88AQ3V6T2 AL157777.2-201ENST00000258070 137 ntBASIC-2.31□□□□□ -2.78
CCDC88AQ3V6T2 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.31□□□□□ -2.78
CCDC88AQ3V6T2 RNU6-1211P-201ENST00000459179 105 ntBASIC-2.31□□□□□ -2.78
CCDC88AQ3V6T2 RNU6-797P-201ENST00000363101 109 ntBASIC-2.32□□□□□ -2.78
CCDC88AQ3V6T2 SNORD116-18-201ENST00000383961 92 ntBASIC-2.32□□□□□ -2.78
CCDC88AQ3V6T2 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.33□□□□□ -2.78
CCDC88AQ3V6T2 MIR3123-201ENST00000583417 75 ntBASIC-2.33□□□□□ -2.78
CCDC88AQ3V6T2 AC004792.1-201ENST00000614523 137 ntBASIC-2.33□□□□□ -2.78
CCDC88AQ3V6T2 Y_RNA.307-201ENST00000365022 117 ntBASIC-2.33□□□□□ -2.78
CCDC88AQ3V6T2 SNORA40-201ENST00000388090 126 ntBASIC-2.33□□□□□ -2.78
CCDC88AQ3V6T2 MIR548V-201ENST00000584165 80 ntBASIC-2.33□□□□□ -2.78
CCDC88AQ3V6T2 Y_RNA.818-201ENST00000618813 71 ntBASIC-2.35□□□□□ -2.78
CCDC88AQ3V6T2 SNORD113-2-201ENST00000391082 72 ntBASIC-2.35□□□□□ -2.79
CCDC88AQ3V6T2 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.35□□□□□ -2.79
CCDC88AQ3V6T2 RNU6-645P-201ENST00000364649 106 ntBASIC-2.36□□□□□ -2.79
CCDC88AQ3V6T2 MIR3170-201ENST00000582699 77 ntBASIC-2.36□□□□□ -2.79
CCDC88AQ3V6T2 MIR630-201ENST00000384957 97 ntBASIC-2.37□□□□□ -2.79
CCDC88AQ3V6T2 MIR8053-201ENST00000613344 75 ntBASIC-2.37□□□□□ -2.79
CCDC88AQ3V6T2 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.37□□□□□ -2.79
CCDC88AQ3V6T2 RNY4P18-201ENST00000391107 89 ntBASIC-2.38□□□□□ -2.79
CCDC88AQ3V6T2 RNU6-379P-201ENST00000363813 104 ntBASIC-2.39□□□□□ -2.79
CCDC88AQ3V6T2 SNORD116-16-201ENST00000384533 92 ntBASIC-2.39□□□□□ -2.79
CCDC88AQ3V6T2 MIR569-201ENST00000385228 96 ntBASIC-2.39□□□□□ -2.79
CCDC88AQ3V6T2 RNU6-904P-201ENST00000516206 101 ntBASIC-2.39□□□□□ -2.79
CCDC88AQ3V6T2 MIR2052-201ENST00000636055 55 ntBASIC-2.39□□□□□ -2.79
CCDC88AQ3V6T2 RNU6-200P-201ENST00000364743 107 ntBASIC-2.39□□□□□ -2.79
CCDC88AQ3V6T2 MT-TG-201ENST00000387429 68 ntBASIC-2.39□□□□□ -2.79
CCDC88AQ3V6T2 RNU7-151P-201ENST00000516930 53 ntBASIC-2.39□□□□□ -2.79
CCDC88AQ3V6T2 RNU6-303P-201ENST00000517091 106 ntBASIC-2.39□□□□□ -2.79
CCDC88AQ3V6T2 Y_RNA.93-201ENST00000363066 109 ntBASIC-2.4□□□□□ -2.79
CCDC88AQ3V6T2 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.4□□□□□ -2.79
CCDC88AQ3V6T2 MIR3914-2-201ENST00000637339 95 ntBASIC-2.4□□□□□ -2.79
CCDC88AQ3V6T2 RNU6-574P-201ENST00000384265 107 ntBASIC-2.41□□□□□ -2.79
CCDC88AQ3V6T2 MIR520D-201ENST00000385002 87 ntBASIC-2.41□□□□□ -2.79
CCDC88AQ3V6T2 RNU6-129P-201ENST00000391022 107 ntBASIC-2.41□□□□□ -2.79
CCDC88AQ3V6T2 RNU7-153P-201ENST00000516455 62 ntBASIC-2.41□□□□□ -2.79
CCDC88AQ3V6T2 Y_RNA.812-201ENST00000610788 101 ntBASIC-2.41□□□□□ -2.79
CCDC88AQ3V6T2 Y_RNA.784-201ENST00000613803 101 ntBASIC-2.41□□□□□ -2.79
CCDC88AQ3V6T2 Y_RNA.787-201ENST00000616522 101 ntBASIC-2.41□□□□□ -2.79
CCDC88AQ3V6T2 Y_RNA.780-201ENST00000617336 101 ntBASIC-2.41□□□□□ -2.79
CCDC88AQ3V6T2 Y_RNA.801-201ENST00000619005 101 ntBASIC-2.41□□□□□ -2.79
CCDC88AQ3V6T2 MTND4LP1-201ENST00000446263 157 ntBASIC-2.42□□□□□ -2.8
CCDC88AQ3V6T2 SNORD33.1-201ENST00000516213 88 ntBASIC-2.42□□□□□ -2.8
CCDC88AQ3V6T2 RNU6-247P-201ENST00000362636 107 ntBASIC-2.43□□□□□ -2.8
CCDC88AQ3V6T2 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.43□□□□□ -2.8
CCDC88AQ3V6T2 RNU6-633P-201ENST00000362612 103 ntBASIC-2.43□□□□□ -2.8
CCDC88AQ3V6T2 Y_RNA.449-201ENST00000384187 102 ntBASIC-2.43□□□□□ -2.8
CCDC88AQ3V6T2 U2.18-201ENST00000622185 84 ntBASIC-2.43□□□□□ -2.8
CCDC88AQ3V6T2 Y_RNA.107-201ENST00000363190 121 ntBASIC-2.44□□□□□ -2.8
CCDC88AQ3V6T2 SNORA27.2-201ENST00000363365 126 ntBASIC-2.44□□□□□ -2.8
CCDC88AQ3V6T2 RNU6-258P-201ENST00000390884 101 ntBASIC-2.44□□□□□ -2.8
CCDC88AQ3V6T2 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.44□□□□□ -2.8
CCDC88AQ3V6T2 SNORD18C-201ENST00000362704 69 ntBASIC-2.45□□□□□ -2.8
CCDC88AQ3V6T2 Y_RNA.218-201ENST00000364218 104 ntBASIC-2.45□□□□□ -2.8
CCDC88AQ3V6T2 RNU6-755P-201ENST00000364400 103 ntBASIC-2.45□□□□□ -2.8
CCDC88AQ3V6T2 RNU6-563P-201ENST00000364872 108 ntBASIC-2.45□□□□□ -2.8
CCDC88AQ3V6T2 RNU6-257P-201ENST00000410238 98 ntBASIC-2.45□□□□□ -2.8
CCDC88AQ3V6T2 U7.3-201ENST00000616123 62 ntBASIC-2.45□□□□□ -2.8
CCDC88AQ3V6T2 Y_RNA.658-201ENST00000515990 97 ntBASIC-2.46□□□□□ -2.8
CCDC88AQ3V6T2 RNU6-982P-201ENST00000516216 102 ntBASIC-2.46□□□□□ -2.8
CCDC88AQ3V6T2 SNORD60-201ENST00000383903 83 ntBASIC-2.47□□□□□ -2.8
CCDC88AQ3V6T2 RNU7-107P-201ENST00000459121 61 ntBASIC-2.47□□□□□ -2.8
CCDC88AQ3V6T2 RNU6-327P-201ENST00000516270 127 ntBASIC-2.47□□□□□ -2.8
CCDC88AQ3V6T2 MIR548W-201ENST00000581970 74 ntBASIC-2.47□□□□□ -2.8
CCDC88AQ3V6T2 Y_RNA.257-201ENST00000364596 102 ntBASIC-2.48□□□□□ -2.81
CCDC88AQ3V6T2 SNORD116-22-201ENST00000384430 92 ntBASIC-2.48□□□□□ -2.81
CCDC88AQ3V6T2 Y_RNA.712-201ENST00000517011 92 ntBASIC-2.48□□□□□ -2.81
CCDC88AQ3V6T2 MTND5P41-201ENST00000517498 206 ntBASIC-2.48□□□□□ -2.81
CCDC88AQ3V6T2 AC074348.1-201ENST00000426503 132 ntBASIC-2.48□□□□□ -2.81
CCDC88AQ3V6T2 RNU6-1045P-201ENST00000516321 107 ntBASIC-2.48□□□□□ -2.81
CCDC88AQ3V6T2 SNORA63-201ENST00000363450 132 ntBASIC-2.49□□□□□ -2.81
CCDC88AQ3V6T2 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.49□□□□□ -2.81
CCDC88AQ3V6T2 RNU6-196P-201ENST00000384315 107 ntBASIC-2.49□□□□□ -2.81
CCDC88AQ3V6T2 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.49□□□□□ -2.81
CCDC88AQ3V6T2 MTATP8P2-201ENST00000435212 202 ntBASIC-2.49□□□□□ -2.81
CCDC88AQ3V6T2 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.5□□□□□ -2.81
CCDC88AQ3V6T2 SNORD113.1-201ENST00000363280 73 ntBASIC-2.5□□□□□ -2.81
Retrieved 100 of 98,524 protein–RNA pairs in 205 ms