Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 Y_RNA.30-201ENST00000362572 97 ntBASIC0.46□□□□□ -2.34
EPHB3P54753 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.46□□□□□ -2.34
EPHB3P54753 RNU7-55P-201ENST00000459426 62 ntBASIC0.46□□□□□ -2.34
EPHB3P54753 MIR4432-201ENST00000581823 84 ntBASIC0.46□□□□□ -2.34
EPHB3P54753 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.46□□□□□ -2.34
EPHB3P54753 RNU6-810P-201ENST00000364001 107 ntBASIC0.45□□□□□ -2.34
EPHB3P54753 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.45□□□□□ -2.34
EPHB3P54753 Y_RNA.698-201ENST00000516798 118 ntBASIC0.45□□□□□ -2.34
EPHB3P54753 AC069113.3-201ENST00000521019 150 ntBASIC0.45□□□□□ -2.34
EPHB3P54753 AC108676.2-201ENST00000605225 163 ntBASIC0.45□□□□□ -2.34
EPHB3P54753 snoR1.1-201ENST00000628177 80 ntBASIC0.45□□□□□ -2.34
EPHB3P54753 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.45□□□□□ -2.34
EPHB3P54753 RNA5SP62-201ENST00000363457 110 ntBASIC0.44□□□□□ -2.34
EPHB3P54753 VTRNA1-3-201ENST00000365645 89 ntBASIC0.44□□□□□ -2.34
EPHB3P54753 SNORA50A-201ENST00000384225 134 ntBASIC0.44□□□□□ -2.34
EPHB3P54753 RNA5SP330-201ENST00000517096 96 ntBASIC0.44□□□□□ -2.34
EPHB3P54753 MIR148A-201ENST00000362215 68 ntBASIC0.43□□□□□ -2.34
EPHB3P54753 Y_RNA.115-201ENST00000363272 98 ntBASIC0.43□□□□□ -2.34
EPHB3P54753 RNU6-598P-201ENST00000364017 105 ntBASIC0.43□□□□□ -2.34
EPHB3P54753 RNU6-973P-201ENST00000364690 107 ntBASIC0.43□□□□□ -2.34
EPHB3P54753 MIR548H2-201ENST00000408874 88 ntBASIC0.43□□□□□ -2.34
EPHB3P54753 CR383656.4-201ENST00000546909 122 ntBASIC0.43□□□□□ -2.34
EPHB3P54753 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.43□□□□□ -2.34
EPHB3P54753 MIR6514-201ENST00000622549 70 ntBASIC0.43□□□□□ -2.34
EPHB3P54753 MIR924-201ENST00000638017 53 ntBASIC0.43□□□□□ -2.34
EPHB3P54753 AC090625.1-201ENST00000357130 210 ntBASIC0.42□□□□□ -2.34
EPHB3P54753 Y_RNA.374-201ENST00000365606 101 ntBASIC0.42□□□□□ -2.34
EPHB3P54753 MIR548X-201ENST00000580069 75 ntBASIC0.42□□□□□ -2.34
EPHB3P54753 MIR4464-201ENST00000580818 92 ntBASIC0.42□□□□□ -2.34
EPHB3P54753 AL391099.1-201ENST00000624635 187 ntBASIC0.42□□□□□ -2.34
EPHB3P54753 SNORA62.4-201ENST00000365504 151 ntBASIC0.41□□□□□ -2.34
EPHB3P54753 RNU6-900P-201ENST00000384498 102 ntBASIC0.41□□□□□ -2.34
EPHB3P54753 RNU4-88P-201ENST00000411220 86 ntBASIC0.41□□□□□ -2.34
EPHB3P54753 RNU6-180P-201ENST00000516697 61 ntBASIC0.41□□□□□ -2.34
EPHB3P54753 RNU6-753P-201ENST00000363926 107 ntBASIC0.4□□□□□ -2.35
EPHB3P54753 RNU4-33P-201ENST00000364316 85 ntBASIC0.4□□□□□ -2.35
EPHB3P54753 RNU6-1327P-201ENST00000365302 105 ntBASIC0.4□□□□□ -2.35
EPHB3P54753 MIR643-201ENST00000385267 97 ntBASIC0.4□□□□□ -2.35
EPHB3P54753 AC096531.1-201ENST00000419107 107 ntBASIC0.4□□□□□ -2.35
EPHB3P54753 RNU7-160P-201ENST00000516660 62 ntBASIC0.4□□□□□ -2.35
EPHB3P54753 MIR4490-201ENST00000582647 84 ntBASIC0.4□□□□□ -2.35
EPHB3P54753 MIR8087-201ENST00000612745 78 ntBASIC0.4□□□□□ -2.35
EPHB3P54753 AL445584.3-201ENST00000617173 78 ntBASIC0.39□□□□□ -2.35
EPHB3P54753 MIR6888-201ENST00000621977 67 ntBASIC0.39□□□□□ -2.35
EPHB3P54753 U2.18-201ENST00000622185 84 ntBASIC0.39□□□□□ -2.35
EPHB3P54753 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
EPHB3P54753 RNU6-696P-201ENST00000390834 107 ntBASIC0.38□□□□□ -2.35
EPHB3P54753 MIR892B-201ENST00000401279 77 ntBASIC0.38□□□□□ -2.35
EPHB3P54753 MIR1197-201ENST00000408818 88 ntBASIC0.38□□□□□ -2.35
EPHB3P54753 RNU6-1133P-201ENST00000410963 100 ntBASIC0.38□□□□□ -2.35
EPHB3P54753 RNA5SP457-201ENST00000363657 124 ntBASIC0.37□□□□□ -2.35
EPHB3P54753 RNA5SP163-201ENST00000410304 99 ntBASIC0.37□□□□□ -2.35
EPHB3P54753 RNU6-1262P-201ENST00000516217 96 ntBASIC0.37□□□□□ -2.35
EPHB3P54753 MIR4743-201ENST00000584576 69 ntBASIC0.37□□□□□ -2.35
EPHB3P54753 MIR6507-201ENST00000613630 70 ntBASIC0.37□□□□□ -2.35
EPHB3P54753 MIR4315-1-201ENST00000636800 73 ntBASIC0.37□□□□□ -2.35
EPHB3P54753 MIR4315-2-201ENST00000640925 73 ntBASIC0.37□□□□□ -2.35
EPHB3P54753 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
EPHB3P54753 MIR330-201ENST00000362196 94 ntBASIC0.36□□□□□ -2.35
EPHB3P54753 RNU6-455P-201ENST00000384681 107 ntBASIC0.36□□□□□ -2.35
EPHB3P54753 RNU7-151P-201ENST00000516930 53 ntBASIC0.36□□□□□ -2.35
EPHB3P54753 RNU6-419P-201ENST00000517030 63 ntBASIC0.35□□□□□ -2.35
EPHB3P54753 MIR4514-201ENST00000581410 57 ntBASIC0.35□□□□□ -2.35
EPHB3P54753 uc_338.36-201ENST00000622331 158 ntBASIC0.35□□□□□ -2.35
EPHB3P54753 Y_RNA.69-201ENST00000362885 109 ntBASIC0.34□□□□□ -2.36
EPHB3P54753 RNU6-35P-201ENST00000384530 107 ntBASIC0.34□□□□□ -2.36
EPHB3P54753 MIR548AA1-201ENST00000384971 97 ntBASIC0.34□□□□□ -2.36
EPHB3P54753 MIR579-201ENST00000385221 98 ntBASIC0.34□□□□□ -2.36
EPHB3P54753 MIR125B1-201ENST00000385236 88 ntBASIC0.33□□□□□ -2.36
EPHB3P54753 SNORD57-201ENST00000448188 72 ntBASIC0.33□□□□□ -2.36
EPHB3P54753 RNU6-1206P-201ENST00000516339 103 ntBASIC0.33□□□□□ -2.36
EPHB3P54753 U7.5-201ENST00000517224 61 ntBASIC0.33□□□□□ -2.36
EPHB3P54753 SNORA42.1-201ENST00000363515 137 ntBASIC0.32□□□□□ -2.36
EPHB3P54753 MIR610-201ENST00000385139 96 ntBASIC0.32□□□□□ -2.36
EPHB3P54753 RNA5SP134-201ENST00000516492 96 ntBASIC0.32□□□□□ -2.36
EPHB3P54753 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.31□□□□□ -2.36
EPHB3P54753 RNU7-165P-201ENST00000458864 60 ntBASIC0.31□□□□□ -2.36
EPHB3P54753 RNU6-1174P-201ENST00000517278 101 ntBASIC0.31□□□□□ -2.36
EPHB3P54753 RNU6-995P-201ENST00000391244 107 ntBASIC0.3□□□□□ -2.36
EPHB3P54753 Y_RNA.613-201ENST00000410726 97 ntBASIC0.3□□□□□ -2.36
EPHB3P54753 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.3□□□□□ -2.36
EPHB3P54753 AC244250.2-201ENST00000418731 148 ntBASIC0.29□□□□□ -2.36
EPHB3P54753 SNORA62.5-201ENST00000516634 120 ntBASIC0.29□□□□□ -2.36
EPHB3P54753 MIR5704-201ENST00000584029 77 ntBASIC0.29□□□□□ -2.36
EPHB3P54753 MIR2909-201ENST00000617113 69 ntBASIC0.29□□□□□ -2.36
EPHB3P54753 RNU6-924P-201ENST00000362926 108 ntBASIC0.28□□□□□ -2.36
EPHB3P54753 RNU6-828P-201ENST00000364876 107 ntBASIC0.28□□□□□ -2.36
EPHB3P54753 SNORD56B-201ENST00000384713 71 ntBASIC0.28□□□□□ -2.36
EPHB3P54753 MIR593-201ENST00000384856 100 ntBASIC0.28□□□□□ -2.36
EPHB3P54753 RNU6-1267P-201ENST00000410747 107 ntBASIC0.28□□□□□ -2.36
EPHB3P54753 RNU7-88P-201ENST00000458752 63 ntBASIC0.28□□□□□ -2.36
EPHB3P54753 SNORD63.1-201ENST00000516178 80 ntBASIC0.28□□□□□ -2.36
EPHB3P54753 AC104408.1-201ENST00000605241 170 ntBASIC0.28□□□□□ -2.36
EPHB3P54753 RNA5SP257-201ENST00000363023 116 ntBASIC0.27□□□□□ -2.37
EPHB3P54753 MIR145-201ENST00000384967 88 ntBASIC0.27□□□□□ -2.37
EPHB3P54753 RNU6-930P-201ENST00000390938 100 ntBASIC0.27□□□□□ -2.37
EPHB3P54753 RNU7-159P-201ENST00000459284 62 ntBASIC0.27□□□□□ -2.37
EPHB3P54753 MIR6854-201ENST00000614935 69 ntBASIC0.27□□□□□ -2.37
EPHB3P54753 MIR329-2-201ENST00000385029 84 ntBASIC0.26□□□□□ -2.37
EPHB3P54753 MIR8068-201ENST00000618032 68 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms