Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 Z95118.1-201ENST00000421372 247 ntBASIC-0.2□□□□□ -2.44
COPB1P53618 RNU6-668P-201ENST00000364180 107 ntBASIC-0.21□□□□□ -2.44
COPB1P53618 MIR214-201ENST00000385214 110 ntBASIC-0.21□□□□□ -2.44
COPB1P53618 AL021921.1-201ENST00000442774 93 ntBASIC-0.21□□□□□ -2.44
COPB1P53618 MIR3666-201ENST00000607845 111 ntBASIC-0.21□□□□□ -2.44
COPB1P53618 Y_RNA.565-201ENST00000384719 101 ntBASIC-0.22□□□□□ -2.44
COPB1P53618 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.22□□□□□ -2.44
COPB1P53618 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.22□□□□□ -2.44
COPB1P53618 RNU7-174P-201ENST00000516248 59 ntBASIC-0.22□□□□□ -2.44
COPB1P53618 MIR4280-201ENST00000582178 76 ntBASIC-0.22□□□□□ -2.44
COPB1P53618 AL353803.5-201ENST00000599815 141 ntBASIC-0.22□□□□□ -2.44
COPB1P53618 snoR1.1-201ENST00000628177 80 ntBASIC-0.22□□□□□ -2.44
COPB1P53618 RNU6-518P-201ENST00000516056 96 ntBASIC-0.23□□□□□ -2.45
COPB1P53618 RNU7-154P-201ENST00000516194 62 ntBASIC-0.23□□□□□ -2.45
COPB1P53618 RNA5SP215-201ENST00000363440 122 ntBASIC-0.24□□□□□ -2.45
COPB1P53618 RNU6-758P-201ENST00000516292 89 ntBASIC-0.24□□□□□ -2.45
COPB1P53618 MIR4263-201ENST00000584745 83 ntBASIC-0.24□□□□□ -2.45
COPB1P53618 RNU6-901P-201ENST00000384593 106 ntBASIC-0.25□□□□□ -2.45
COPB1P53618 MIR548C-201ENST00000384815 97 ntBASIC-0.25□□□□□ -2.45
COPB1P53618 RNA5SP300-201ENST00000391197 107 ntBASIC-0.25□□□□□ -2.45
COPB1P53618 RNU6-871P-201ENST00000516122 100 ntBASIC-0.25□□□□□ -2.45
COPB1P53618 MIR5704-201ENST00000584029 77 ntBASIC-0.25□□□□□ -2.45
COPB1P53618 AP001180.6-201ENST00000584918 159 ntBASIC-0.25□□□□□ -2.45
COPB1P53618 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.26□□□□□ -2.45
COPB1P53618 RNA5SP66-201ENST00000517178 101 ntBASIC-0.26□□□□□ -2.45
COPB1P53618 RNA5SP368-201ENST00000364298 116 ntBASIC-0.27□□□□□ -2.45
COPB1P53618 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.27□□□□□ -2.45
COPB1P53618 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.27□□□□□ -2.45
COPB1P53618 MIR517B-201ENST00000385102 67 ntBASIC-0.27□□□□□ -2.45
COPB1P53618 RNU6-663P-201ENST00000391105 106 ntBASIC-0.27□□□□□ -2.45
COPB1P53618 AC114755.3-201ENST00000481111 251 ntBASIC-0.27□□□□□ -2.45
COPB1P53618 MIR4464-201ENST00000580818 92 ntBASIC-0.27□□□□□ -2.45
COPB1P53618 MIR8068-201ENST00000618032 68 ntBASIC-0.27□□□□□ -2.45
COPB1P53618 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.27□□□□□ -2.45
COPB1P53618 SNORA62.4-201ENST00000365504 151 ntBASIC-0.28□□□□□ -2.45
COPB1P53618 MIR6854-201ENST00000614935 69 ntBASIC-0.28□□□□□ -2.45
COPB1P53618 RNU6-698P-201ENST00000363523 107 ntBASIC-0.29□□□□□ -2.46
COPB1P53618 RNU6-34P-201ENST00000364874 107 ntBASIC-0.29□□□□□ -2.46
COPB1P53618 AL445193.1-201ENST00000441183 141 ntBASIC-0.29□□□□□ -2.46
COPB1P53618 snoU13.19-201ENST00000459148 104 ntBASIC-0.29□□□□□ -2.46
COPB1P53618 MIR548AG1-201ENST00000579932 66 ntBASIC-0.29□□□□□ -2.46
COPB1P53618 MIR4645-201ENST00000583158 77 ntBASIC-0.29□□□□□ -2.46
COPB1P53618 MIR4493-201ENST00000584016 73 ntBASIC-0.29□□□□□ -2.46
COPB1P53618 RNA5SP25-201ENST00000410815 110 ntBASIC-0.3□□□□□ -2.46
COPB1P53618 MIR6851-201ENST00000617060 67 ntBASIC-0.3□□□□□ -2.46
COPB1P53618 U4.4-201ENST00000620626 117 ntBASIC-0.3□□□□□ -2.46
COPB1P53618 MIR4788-201ENST00000639104 80 ntBASIC-0.3□□□□□ -2.46
COPB1P53618 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.31□□□□□ -2.46
COPB1P53618 MIR604-201ENST00000384880 94 ntBASIC-0.31□□□□□ -2.46
COPB1P53618 MIR548V-201ENST00000584165 80 ntBASIC-0.31□□□□□ -2.46
COPB1P53618 MIR6888-201ENST00000621977 67 ntBASIC-0.31□□□□□ -2.46
COPB1P53618 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.32□□□□□ -2.46
COPB1P53618 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.32□□□□□ -2.46
COPB1P53618 SNORD30.1-201ENST00000391309 70 ntBASIC-0.32□□□□□ -2.46
COPB1P53618 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.32□□□□□ -2.46
COPB1P53618 AC093726.3-201ENST00000637588 150 ntBASIC-0.32□□□□□ -2.46
COPB1P53618 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.33□□□□□ -2.46
COPB1P53618 RNU6-649P-201ENST00000384463 107 ntBASIC-0.33□□□□□ -2.46
COPB1P53618 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.33□□□□□ -2.46
COPB1P53618 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.33□□□□□ -2.46
COPB1P53618 RNU6-630P-201ENST00000391258 106 ntBASIC-0.33□□□□□ -2.46
COPB1P53618 SNORD38.3-201ENST00000516599 73 ntBASIC-0.33□□□□□ -2.46
COPB1P53618 AL445584.3-201ENST00000617173 78 ntBASIC-0.33□□□□□ -2.46
COPB1P53618 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.34□□□□□ -2.46
COPB1P53618 SNORD114-28-201ENST00000363610 72 ntBASIC-0.34□□□□□ -2.46
COPB1P53618 SNORD114-11-201ENST00000363738 75 ntBASIC-0.34□□□□□ -2.46
COPB1P53618 RNU6-30P-201ENST00000384561 107 ntBASIC-0.34□□□□□ -2.46
COPB1P53618 MIR630-201ENST00000384957 97 ntBASIC-0.34□□□□□ -2.46
COPB1P53618 RNU6-539P-201ENST00000516665 103 ntBASIC-0.34□□□□□ -2.46
COPB1P53618 RNU6-542P-201ENST00000516405 103 ntBASIC-0.35□□□□□ -2.47
COPB1P53618 U6.111-201ENST00000636093 83 ntBASIC-0.35□□□□□ -2.47
COPB1P53618 MIR101-1-201ENST00000362265 75 ntBASIC-0.37□□□□□ -2.47
COPB1P53618 SNORA25.4-201ENST00000363666 124 ntBASIC-0.37□□□□□ -2.47
COPB1P53618 AC005520.4-201ENST00000604337 90 ntBASIC-0.37□□□□□ -2.47
COPB1P53618 AC108676.2-201ENST00000605225 163 ntBASIC-0.37□□□□□ -2.47
COPB1P53618 SNORD114-15-201ENST00000364687 72 ntBASIC-0.38□□□□□ -2.47
COPB1P53618 MIR8064-201ENST00000612863 90 ntBASIC-0.38□□□□□ -2.47
COPB1P53618 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.39□□□□□ -2.47
COPB1P53618 SNORD113-2-201ENST00000391082 72 ntBASIC-0.39□□□□□ -2.47
COPB1P53618 RNA5SP169-201ENST00000517268 117 ntBASIC-0.39□□□□□ -2.47
COPB1P53618 SNORD74.6-201ENST00000364796 70 ntBASIC-0.4□□□□□ -2.47
COPB1P53618 AC114801.3-201ENST00000510231 177 ntBASIC-0.4□□□□□ -2.47
COPB1P53618 MIR518B-201ENST00000385127 83 ntBASIC-0.41□□□□□ -2.48
COPB1P53618 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.41□□□□□ -2.48
COPB1P53618 RNU6-800P-201ENST00000384473 103 ntBASIC-0.42□□□□□ -2.48
COPB1P53618 RNU6-246P-201ENST00000384702 107 ntBASIC-0.42□□□□□ -2.48
COPB1P53618 MIR124-2-201ENST00000385081 109 ntBASIC-0.42□□□□□ -2.48
COPB1P53618 RNU6-320P-201ENST00000516511 106 ntBASIC-0.42□□□□□ -2.48
COPB1P53618 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.43□□□□□ -2.48
COPB1P53618 SNORD14C-201ENST00000365382 88 ntBASIC-0.44□□□□□ -2.48
COPB1P53618 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.44□□□□□ -2.48
COPB1P53618 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
COPB1P53618 SNORA13-201ENST00000458790 133 ntBASIC-0.44□□□□□ -2.48
COPB1P53618 RNU6-924P-201ENST00000362926 108 ntBASIC-0.45□□□□□ -2.48
COPB1P53618 RNA5SP275-201ENST00000363936 118 ntBASIC-0.45□□□□□ -2.48
COPB1P53618 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.45□□□□□ -2.48
COPB1P53618 MIR204-201ENST00000385200 110 ntBASIC-0.45□□□□□ -2.48
COPB1P53618 MIR527-201ENST00000385244 85 ntBASIC-0.45□□□□□ -2.48
COPB1P53618 RNA5SP451-201ENST00000410588 110 ntBASIC-0.45□□□□□ -2.48
COPB1P53618 SNORD126-201ENST00000459475 77 ntBASIC-0.45□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 257.4 ms