Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.61□□□□□ -2.83
NUP98P52948 AP001340.1-201ENST00000624405 217 ntBASIC-2.61□□□□□ -2.83
NUP98P52948 Y_RNA.79-201ENST00000362992 113 ntBASIC-2.62□□□□□ -2.83
NUP98P52948 RNU7-197P-201ENST00000458836 62 ntBASIC-2.62□□□□□ -2.83
NUP98P52948 U6.81-201ENST00000612550 106 ntBASIC-2.62□□□□□ -2.83
NUP98P52948 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-2.62□□□□□ -2.83
NUP98P52948 MT-TD-201ENST00000387419 68 ntBASIC-2.63□□□□□ -2.83
NUP98P52948 RNU6-1324P-201ENST00000384222 107 ntBASIC-2.63□□□□□ -2.83
NUP98P52948 RNU6-1219P-201ENST00000516143 112 ntBASIC-2.63□□□□□ -2.83
NUP98P52948 RNU6-834P-201ENST00000362367 110 ntBASIC-2.64□□□□□ -2.83
NUP98P52948 Y_RNA.109-201ENST00000363215 102 ntBASIC-2.64□□□□□ -2.83
NUP98P52948 RNU6-1113P-201ENST00000384348 107 ntBASIC-2.64□□□□□ -2.83
NUP98P52948 RNU6-1044P-201ENST00000384755 107 ntBASIC-2.64□□□□□ -2.83
NUP98P52948 SNORD113-2-201ENST00000391082 72 ntBASIC-2.64□□□□□ -2.83
NUP98P52948 RNU6-781P-201ENST00000516377 101 ntBASIC-2.64□□□□□ -2.83
NUP98P52948 MIR4796-201ENST00000580742 81 ntBASIC-2.64□□□□□ -2.83
NUP98P52948 Y_RNA.20-201ENST00000362479 113 ntBASIC-2.65□□□□□ -2.83
NUP98P52948 RNU6-639P-201ENST00000384074 107 ntBASIC-2.65□□□□□ -2.83
NUP98P52948 Y_RNA.563-201ENST00000384707 108 ntBASIC-2.65□□□□□ -2.83
NUP98P52948 RNU6-972P-201ENST00000391208 107 ntBASIC-2.66□□□□□ -2.84
NUP98P52948 MIR1236-201ENST00000408340 102 ntBASIC-2.66□□□□□ -2.84
NUP98P52948 RNU4-11P-201ENST00000365287 132 ntBASIC-2.67□□□□□ -2.84
NUP98P52948 AL731768.1-201ENST00000603124 139 ntBASIC-2.67□□□□□ -2.84
NUP98P52948 MTRNR2L9-201ENST00000622562 75 ntBASIC-2.67□□□□□ -2.84
NUP98P52948 MTND4P29-201ENST00000503122 1372 ntBASIC-2.67□□□□□ -2.84
NUP98P52948 RNU6-340P-201ENST00000364005 107 ntBASIC-2.68□□□□□ -2.84
NUP98P52948 RNU6-649P-201ENST00000384463 107 ntBASIC-2.68□□□□□ -2.84
NUP98P52948 MIR630-201ENST00000384957 97 ntBASIC-2.68□□□□□ -2.84
NUP98P52948 RNY4P18-201ENST00000391107 89 ntBASIC-2.68□□□□□ -2.84
NUP98P52948 SNORD63.2-201ENST00000516303 64 ntBASIC-2.68□□□□□ -2.84
NUP98P52948 Y_RNA.321-201ENST00000365149 102 ntBASIC-2.68□□□□□ -2.84
NUP98P52948 Y_RNA.459-201ENST00000384251 102 ntBASIC-2.68□□□□□ -2.84
NUP98P52948 Y_RNA.652-201ENST00000458902 102 ntBASIC-2.68□□□□□ -2.84
NUP98P52948 RNU6-523P-201ENST00000516304 54 ntBASIC-2.68□□□□□ -2.84
NUP98P52948 MIR548V-201ENST00000584165 80 ntBASIC-2.68□□□□□ -2.84
NUP98P52948 RNU6-1020P-201ENST00000363684 107 ntBASIC-2.69□□□□□ -2.84
NUP98P52948 RNU6-974P-201ENST00000384099 108 ntBASIC-2.69□□□□□ -2.84
NUP98P52948 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.69□□□□□ -2.84
NUP98P52948 RNU6-1277P-201ENST00000364561 107 ntBASIC-2.7□□□□□ -2.84
NUP98P52948 RNU6-1135P-201ENST00000411083 103 ntBASIC-2.7□□□□□ -2.84
NUP98P52948 AL450471.1-201ENST00000447509 127 ntBASIC-2.7□□□□□ -2.84
NUP98P52948 RNU6-971P-201ENST00000516920 106 ntBASIC-2.7□□□□□ -2.84
NUP98P52948 MIR4777-201ENST00000583710 86 ntBASIC-2.7□□□□□ -2.84
NUP98P52948 RNU6-828P-201ENST00000364876 107 ntBASIC-2.7□□□□□ -2.84
NUP98P52948 MIR7978-201ENST00000636158 59 ntBASIC-2.7□□□□□ -2.84
NUP98P52948 SNORD116-16-201ENST00000384533 92 ntBASIC-2.71□□□□□ -2.84
NUP98P52948 AC022559.1-201ENST00000520905 205 ntBASIC-2.71□□□□□ -2.84
NUP98P52948 Y_RNA.96-201ENST00000363092 109 ntBASIC-2.72□□□□□ -2.84
NUP98P52948 Y_RNA.200-201ENST00000364018 102 ntBASIC-2.72□□□□□ -2.84
NUP98P52948 RNU6-361P-201ENST00000364454 107 ntBASIC-2.72□□□□□ -2.84
NUP98P52948 Y_RNA.272-201ENST00000364696 102 ntBASIC-2.72□□□□□ -2.84
NUP98P52948 RNU6-887P-201ENST00000410660 100 ntBASIC-2.72□□□□□ -2.84
NUP98P52948 Y_RNA.619-201ENST00000410951 90 ntBASIC-2.72□□□□□ -2.84
NUP98P52948 Y_RNA.705-201ENST00000516862 110 ntBASIC-2.72□□□□□ -2.84
NUP98P52948 MIR5009-201ENST00000578736 100 ntBASIC-2.72□□□□□ -2.84
NUP98P52948 Y_RNA.202-201ENST00000364083 110 ntBASIC-2.72□□□□□ -2.85
NUP98P52948 Y_RNA.307-201ENST00000365022 117 ntBASIC-2.72□□□□□ -2.85
NUP98P52948 Y_RNA.612-201ENST00000410717 95 ntBASIC-2.72□□□□□ -2.85
NUP98P52948 SNORA81.3-201ENST00000517283 198 ntBASIC-2.72□□□□□ -2.85
NUP98P52948 MIR548C-201ENST00000384815 97 ntBASIC-2.73□□□□□ -2.85
NUP98P52948 MIR3675-201ENST00000583661 73 ntBASIC-2.73□□□□□ -2.85
NUP98P52948 RNA5SP215-201ENST00000363440 122 ntBASIC-2.74□□□□□ -2.85
NUP98P52948 Y_RNA.216-201ENST00000364205 93 ntBASIC-2.74□□□□□ -2.85
NUP98P52948 SNORA17.4-201ENST00000391287 132 ntBASIC-2.74□□□□□ -2.85
NUP98P52948 MIR548AJ2-201ENST00000408539 92 ntBASIC-2.74□□□□□ -2.85
NUP98P52948 RNU6-1061P-201ENST00000516530 99 ntBASIC-2.74□□□□□ -2.85
NUP98P52948 U7.2-201ENST00000607576 63 ntBASIC-2.74□□□□□ -2.85
NUP98P52948 AC072026.1-201ENST00000605023 201 ntBASIC-2.75□□□□□ -2.85
NUP98P52948 MIR202-201ENST00000362219 110 ntBASIC-2.75□□□□□ -2.85
NUP98P52948 SNORD1B-201ENST00000363091 84 ntBASIC-2.75□□□□□ -2.85
NUP98P52948 Y_RNA.138-201ENST00000363462 102 ntBASIC-2.75□□□□□ -2.85
NUP98P52948 SNORD115-37-201ENST00000363768 82 ntBASIC-2.75□□□□□ -2.85
NUP98P52948 SNORD58C-201ENST00000365223 64 ntBASIC-2.75□□□□□ -2.85
NUP98P52948 Y_RNA.520-201ENST00000384556 102 ntBASIC-2.75□□□□□ -2.85
NUP98P52948 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC-2.75□□□□□ -2.85
NUP98P52948 Y_RNA.139-201ENST00000363464 102 ntBASIC-2.76□□□□□ -2.85
NUP98P52948 Y_RNA.350-201ENST00000365409 98 ntBASIC-2.76□□□□□ -2.85
NUP98P52948 AL158147.1-201ENST00000443970 75 ntBASIC-2.76□□□□□ -2.85
NUP98P52948 AC141273.2-201ENST00000618989 130 ntBASIC-2.76□□□□□ -2.85
NUP98P52948 RNU6-800P-201ENST00000384473 103 ntBASIC-2.77□□□□□ -2.85
NUP98P52948 RNU6-520P-201ENST00000384717 104 ntBASIC-2.77□□□□□ -2.85
NUP98P52948 Y_RNA.662-201ENST00000516028 97 ntBASIC-2.77□□□□□ -2.85
NUP98P52948 AC020661.2-201ENST00000560114 134 ntBASIC-2.77□□□□□ -2.85
NUP98P52948 RNU6-537P-201ENST00000517277 103 ntBASIC-2.77□□□□□ -2.85
NUP98P52948 MIR579-201ENST00000385221 98 ntBASIC-2.78□□□□□ -2.85
NUP98P52948 RNU6-795P-201ENST00000516323 103 ntBASIC-2.78□□□□□ -2.85
NUP98P52948 RNU6-345P-201ENST00000517001 107 ntBASIC-2.78□□□□□ -2.85
NUP98P52948 SNORD116-10-201ENST00000363791 102 ntBASIC-2.79□□□□□ -2.86
NUP98P52948 Y_RNA.434-201ENST00000384090 100 ntBASIC-2.79□□□□□ -2.86
NUP98P52948 Y_RNA.574-201ENST00000384766 95 ntBASIC-2.79□□□□□ -2.86
NUP98P52948 RNU6-68P-201ENST00000516576 104 ntBASIC-2.79□□□□□ -2.86
NUP98P52948 RNU6-530P-201ENST00000391180 107 ntBASIC-2.8□□□□□ -2.86
NUP98P52948 Y_RNA.47-201ENST00000362697 108 ntBASIC-2.81□□□□□ -2.86
NUP98P52948 SNORD114-13-201ENST00000364377 74 ntBASIC-2.81□□□□□ -2.86
NUP98P52948 Y_RNA.264-201ENST00000364665 102 ntBASIC-2.82□□□□□ -2.86
NUP98P52948 Y_RNA.460-201ENST00000384255 102 ntBASIC-2.82□□□□□ -2.86
NUP98P52948 SNORD77.2-201ENST00000391045 68 ntBASIC-2.82□□□□□ -2.86
NUP98P52948 SNORA41B-201ENST00000384785 128 ntBASIC-2.83□□□□□ -2.86
NUP98P52948 RNU4-40P-201ENST00000364351 143 ntBASIC-2.84□□□□□ -2.86
NUP98P52948 Y_RNA.478-201ENST00000384358 107 ntBASIC-2.84□□□□□ -2.86
Retrieved 100 of 98,524 protein–RNA pairs in 445.4 ms