Protein–RNA interactions for Protein: P49761

CLK3, Dual specificity protein kinase CLK3, humanhuman

Known RBP Predictions only

Length 638 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P49761 RNU6-973P-201ENST00000364690 107 ntBASIC0.27□□□□□ -2.37
CLK3P49761 SNORA62.4-201ENST00000365504 151 ntBASIC0.27□□□□□ -2.37
CLK3P49761 RNA5SP193-201ENST00000410353 107 ntBASIC0.27□□□□□ -2.37
CLK3P49761 RNU6-1133P-201ENST00000410963 100 ntBASIC0.27□□□□□ -2.37
CLK3P49761 RNA5SP436-201ENST00000516020 115 ntBASIC0.27□□□□□ -2.37
CLK3P49761 AC108676.2-201ENST00000605225 163 ntBASIC0.27□□□□□ -2.37
CLK3P49761 AL391099.1-201ENST00000624635 187 ntBASIC0.27□□□□□ -2.37
CLK3P49761 SNORD1B-201ENST00000363091 84 ntBASIC0.26□□□□□ -2.37
CLK3P49761 MIR610-201ENST00000385139 96 ntBASIC0.26□□□□□ -2.37
CLK3P49761 RNU6-808P-201ENST00000391233 108 ntBASIC0.26□□□□□ -2.37
CLK3P49761 SNORD116.2-201ENST00000391251 93 ntBASIC0.26□□□□□ -2.37
CLK3P49761 MIR7978-201ENST00000636158 59 ntBASIC0.26□□□□□ -2.37
CLK3P49761 RNU6-172P-201ENST00000411000 93 ntBASIC0.25□□□□□ -2.37
CLK3P49761 MIR6507-201ENST00000613630 70 ntBASIC0.25□□□□□ -2.37
CLK3P49761 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.24□□□□□ -2.37
CLK3P49761 RNU6-455P-201ENST00000384681 107 ntBASIC0.24□□□□□ -2.37
CLK3P49761 AC096531.1-201ENST00000419107 107 ntBASIC0.24□□□□□ -2.37
CLK3P49761 Y_RNA.698-201ENST00000516798 118 ntBASIC0.24□□□□□ -2.37
CLK3P49761 SNORA40.16-201ENST00000517238 121 ntBASIC0.24□□□□□ -2.37
CLK3P49761 MIR5093-201ENST00000583199 100 ntBASIC0.24□□□□□ -2.37
CLK3P49761 SNORA42.1-201ENST00000363515 137 ntBASIC0.23□□□□□ -2.37
CLK3P49761 RNU6-936P-201ENST00000384005 107 ntBASIC0.23□□□□□ -2.37
CLK3P49761 RNU6-1184P-201ENST00000384588 108 ntBASIC0.23□□□□□ -2.37
CLK3P49761 SNORA40B-201ENST00000385573 128 ntBASIC0.23□□□□□ -2.37
CLK3P49761 MIR4464-201ENST00000580818 92 ntBASIC0.23□□□□□ -2.37
CLK3P49761 uc_338.36-201ENST00000622331 158 ntBASIC0.23□□□□□ -2.37
CLK3P49761 MIR593-201ENST00000384856 100 ntBASIC0.22□□□□□ -2.37
CLK3P49761 RNU7-165P-201ENST00000458864 60 ntBASIC0.22□□□□□ -2.37
CLK3P49761 AC104408.1-201ENST00000605241 170 ntBASIC0.22□□□□□ -2.37
CLK3P49761 MIR6888-201ENST00000621977 67 ntBASIC0.22□□□□□ -2.37
CLK3P49761 Y_RNA.118-201ENST00000363300 101 ntBASIC0.21□□□□□ -2.38
CLK3P49761 RNU6-598P-201ENST00000364017 105 ntBASIC0.21□□□□□ -2.38
CLK3P49761 AC010487.4-201ENST00000637027 61 ntBASIC0.21□□□□□ -2.38
CLK3P49761 RNA5SP214-201ENST00000363378 118 ntBASIC0.2□□□□□ -2.38
CLK3P49761 RNU6-810P-201ENST00000364001 107 ntBASIC0.2□□□□□ -2.38
CLK3P49761 MIR145-201ENST00000384967 88 ntBASIC0.2□□□□□ -2.38
CLK3P49761 RNU7-159P-201ENST00000459284 62 ntBASIC0.2□□□□□ -2.38
CLK3P49761 AL445584.3-201ENST00000617173 78 ntBASIC0.2□□□□□ -2.38
CLK3P49761 RNU6-696P-201ENST00000390834 107 ntBASIC0.19□□□□□ -2.38
CLK3P49761 SNORD114-9-201ENST00000364370 72 ntBASIC0.18□□□□□ -2.38
CLK3P49761 AC244250.2-201ENST00000418731 148 ntBASIC0.18□□□□□ -2.38
CLK3P49761 RNU6-1262P-201ENST00000516217 96 ntBASIC0.18□□□□□ -2.38
CLK3P49761 RN7SL793P-201ENST00000583259 296 ntBASIC0.18□□□□□ -2.38
CLK3P49761 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.18□□□□□ -2.38
CLK3P49761 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.18□□□□□ -2.38
CLK3P49761 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.17□□□□□ -2.38
CLK3P49761 RNU7-160P-201ENST00000516660 62 ntBASIC0.17□□□□□ -2.38
CLK3P49761 MIR6854-201ENST00000614935 69 ntBASIC0.17□□□□□ -2.38
CLK3P49761 U2.18-201ENST00000622185 84 ntBASIC0.17□□□□□ -2.38
CLK3P49761 RNU6-924P-201ENST00000362926 108 ntBASIC0.16□□□□□ -2.38
CLK3P49761 RNU6-901P-201ENST00000384593 106 ntBASIC0.16□□□□□ -2.38
CLK3P49761 MIR548AA1-201ENST00000384971 97 ntBASIC0.16□□□□□ -2.38
CLK3P49761 U7.5-201ENST00000517224 61 ntBASIC0.16□□□□□ -2.38
CLK3P49761 PVT1_3.1-201ENST00000620853 95 ntBASIC0.16□□□□□ -2.38
CLK3P49761 MIR655-201ENST00000362159 97 ntBASIC0.15□□□□□ -2.39
CLK3P49761 RNU6-46P-201ENST00000383860 107 ntBASIC0.15□□□□□ -2.39
CLK3P49761 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.15□□□□□ -2.39
CLK3P49761 Y_RNA.613-201ENST00000410726 97 ntBASIC0.15□□□□□ -2.39
CLK3P49761 RNU6-980P-201ENST00000516925 103 ntBASIC0.15□□□□□ -2.39
CLK3P49761 RNU7-151P-201ENST00000516930 53 ntBASIC0.15□□□□□ -2.39
CLK3P49761 MIR548X-201ENST00000580069 75 ntBASIC0.15□□□□□ -2.39
CLK3P49761 MIR4490-201ENST00000582647 84 ntBASIC0.15□□□□□ -2.39
CLK3P49761 MIR5704-201ENST00000584029 77 ntBASIC0.15□□□□□ -2.39
CLK3P49761 MIR924-201ENST00000638017 53 ntBASIC0.15□□□□□ -2.39
CLK3P49761 SNORD114-26-201ENST00000363543 72 ntBASIC0.14□□□□□ -2.39
CLK3P49761 Y_RNA.379-201ENST00000365653 102 ntBASIC0.14□□□□□ -2.39
CLK3P49761 SNORD56B-201ENST00000384713 71 ntBASIC0.14□□□□□ -2.39
CLK3P49761 SNORA62.5-201ENST00000516634 120 ntBASIC0.14□□□□□ -2.39
CLK3P49761 RNU6-1174P-201ENST00000517278 101 ntBASIC0.14□□□□□ -2.39
CLK3P49761 SNORD114-5-201ENST00000362928 70 ntBASIC0.13□□□□□ -2.39
CLK3P49761 MIR489-201ENST00000384923 84 ntBASIC0.13□□□□□ -2.39
CLK3P49761 MIR579-201ENST00000385221 98 ntBASIC0.13□□□□□ -2.39
CLK3P49761 RNU6-995P-201ENST00000391244 107 ntBASIC0.13□□□□□ -2.39
CLK3P49761 SNORD57-201ENST00000448188 72 ntBASIC0.13□□□□□ -2.39
CLK3P49761 RNU7-88P-201ENST00000458752 63 ntBASIC0.13□□□□□ -2.39
CLK3P49761 MIR8068-201ENST00000618032 68 ntBASIC0.13□□□□□ -2.39
CLK3P49761 RNU4-33P-201ENST00000364316 85 ntBASIC0.11□□□□□ -2.39
CLK3P49761 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
CLK3P49761 AC114755.3-201ENST00000481111 251 ntBASIC0.11□□□□□ -2.39
CLK3P49761 SNORD63.1-201ENST00000516178 80 ntBASIC0.11□□□□□ -2.39
CLK3P49761 SNORD49B-201ENST00000365172 72 ntBASIC0.1□□□□□ -2.39
CLK3P49761 MIR193B-201ENST00000384907 83 ntBASIC0.1□□□□□ -2.39
CLK3P49761 AC104692.1-201ENST00000472406 90 ntBASIC0.1□□□□□ -2.39
CLK3P49761 RNU6-1206P-201ENST00000516339 103 ntBASIC0.1□□□□□ -2.39
CLK3P49761 RNU6-419P-201ENST00000517030 63 ntBASIC0.1□□□□□ -2.39
CLK3P49761 MIR4280-201ENST00000582178 76 ntBASIC0.1□□□□□ -2.39
CLK3P49761 Y_RNA.69-201ENST00000362885 109 ntBASIC0.09□□□□□ -2.4
CLK3P49761 RNU6-929P-201ENST00000384429 107 ntBASIC0.09□□□□□ -2.4
CLK3P49761 Y_RNA.540-201ENST00000384638 111 ntBASIC0.09□□□□□ -2.4
CLK3P49761 MIR124-2-201ENST00000385081 109 ntBASIC0.09□□□□□ -2.4
CLK3P49761 MIR125B1-201ENST00000385236 88 ntBASIC0.09□□□□□ -2.4
CLK3P49761 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.09□□□□□ -2.4
CLK3P49761 AC023932.2-201ENST00000603176 175 ntBASIC0.09□□□□□ -2.4
CLK3P49761 RNU6-753P-201ENST00000363926 107 ntBASIC0.08□□□□□ -2.4
CLK3P49761 RNU6-1267P-201ENST00000410747 107 ntBASIC0.08□□□□□ -2.4
CLK3P49761 MIR4514-201ENST00000581410 57 ntBASIC0.08□□□□□ -2.4
CLK3P49761 MIR4290-201ENST00000583807 95 ntBASIC0.08□□□□□ -2.4
CLK3P49761 Clostridiales-1.4-201ENST00000636807 150 ntBASIC0.08□□□□□ -2.4
CLK3P49761 RNU6-828P-201ENST00000364876 107 ntBASIC0.07□□□□□ -2.4
CLK3P49761 AL445193.1-201ENST00000441183 141 ntBASIC0.07□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 182.5 ms