Protein–RNA interactions for Protein: P48378

RFX2, DNA-binding protein RFX2, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2P48378 RNU6-539P-201ENST00000516665 103 ntBASIC-0.19□□□□□ -2.44
RFX2P48378 MIR3666-201ENST00000607845 111 ntBASIC-0.19□□□□□ -2.44
RFX2P48378 MIR6854-201ENST00000614935 69 ntBASIC-0.19□□□□□ -2.44
RFX2P48378 MIR8068-201ENST00000618032 68 ntBASIC-0.19□□□□□ -2.44
RFX2P48378 U4.4-201ENST00000620626 117 ntBASIC-0.19□□□□□ -2.44
RFX2P48378 U6.111-201ENST00000636093 83 ntBASIC-0.19□□□□□ -2.44
RFX2P48378 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
RFX2P48378 RNA5SP330-201ENST00000517096 96 ntBASIC-0.2□□□□□ -2.44
RFX2P48378 RNA5SP66-201ENST00000517178 101 ntBASIC-0.2□□□□□ -2.44
RFX2P48378 MIR548AG1-201ENST00000579932 66 ntBASIC-0.2□□□□□ -2.44
RFX2P48378 MIR4280-201ENST00000582178 76 ntBASIC-0.2□□□□□ -2.44
RFX2P48378 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.2□□□□□ -2.44
RFX2P48378 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.21□□□□□ -2.44
RFX2P48378 AC114801.3-201ENST00000510231 177 ntBASIC-0.21□□□□□ -2.44
RFX2P48378 MIR4788-201ENST00000639104 80 ntBASIC-0.21□□□□□ -2.44
RFX2P48378 SNORA25.4-201ENST00000363666 124 ntBASIC-0.22□□□□□ -2.44
RFX2P48378 RNU6-542P-201ENST00000516405 103 ntBASIC-0.22□□□□□ -2.44
RFX2P48378 SNORD38.3-201ENST00000516599 73 ntBASIC-0.22□□□□□ -2.44
RFX2P48378 RNA5SP480-201ENST00000516840 109 ntBASIC-0.22□□□□□ -2.44
RFX2P48378 MIR4464-201ENST00000580818 92 ntBASIC-0.22□□□□□ -2.44
RFX2P48378 AC005520.4-201ENST00000604337 90 ntBASIC-0.22□□□□□ -2.44
RFX2P48378 Y_RNA.205-201ENST00000364128 113 ntBASIC-0.23□□□□□ -2.45
RFX2P48378 SNORA62.4-201ENST00000365504 151 ntBASIC-0.23□□□□□ -2.45
RFX2P48378 SNORD113-2-201ENST00000391082 72 ntBASIC-0.23□□□□□ -2.45
RFX2P48378 AC114755.3-201ENST00000481111 251 ntBASIC-0.23□□□□□ -2.45
RFX2P48378 MIR6888-201ENST00000621977 67 ntBASIC-0.23□□□□□ -2.45
RFX2P48378 RNA5SP300-201ENST00000391197 107 ntBASIC-0.24□□□□□ -2.45
RFX2P48378 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC-0.24□□□□□ -2.45
RFX2P48378 RNU6-800P-201ENST00000384473 103 ntBASIC-0.25□□□□□ -2.45
RFX2P48378 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.25□□□□□ -2.45
RFX2P48378 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.25□□□□□ -2.45
RFX2P48378 AC108676.2-201ENST00000605225 163 ntBASIC-0.25□□□□□ -2.45
RFX2P48378 MIR6851-201ENST00000617060 67 ntBASIC-0.25□□□□□ -2.45
RFX2P48378 AL445584.3-201ENST00000617173 78 ntBASIC-0.25□□□□□ -2.45
RFX2P48378 AC093726.3-201ENST00000637588 150 ntBASIC-0.25□□□□□ -2.45
RFX2P48378 Y_RNA.115-201ENST00000363272 98 ntBASIC-0.26□□□□□ -2.45
RFX2P48378 SNORD114-11-201ENST00000363738 75 ntBASIC-0.26□□□□□ -2.45
RFX2P48378 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.27□□□□□ -2.45
RFX2P48378 MIR124-2-201ENST00000385081 109 ntBASIC-0.27□□□□□ -2.45
RFX2P48378 MIR527-201ENST00000385244 85 ntBASIC-0.27□□□□□ -2.45
RFX2P48378 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
RFX2P48378 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.28□□□□□ -2.45
RFX2P48378 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.29□□□□□ -2.46
RFX2P48378 RNA5SP169-201ENST00000517268 117 ntBASIC-0.29□□□□□ -2.46
RFX2P48378 MIR7111-201ENST00000619751 72 ntBASIC-0.29□□□□□ -2.46
RFX2P48378 RNA5SP457-201ENST00000363657 124 ntBASIC-0.3□□□□□ -2.46
RFX2P48378 Y_RNA.540-201ENST00000384638 111 ntBASIC-0.3□□□□□ -2.46
RFX2P48378 MIR204-201ENST00000385200 110 ntBASIC-0.3□□□□□ -2.46
RFX2P48378 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.31□□□□□ -2.46
RFX2P48378 Y_RNA.386-201ENST00000383913 105 ntBASIC-0.31□□□□□ -2.46
RFX2P48378 MIR2909-201ENST00000617113 69 ntBASIC-0.31□□□□□ -2.46
RFX2P48378 RNU6-458P-201ENST00000384179 107 ntBASIC-0.32□□□□□ -2.46
RFX2P48378 RNU6-246P-201ENST00000384702 107 ntBASIC-0.32□□□□□ -2.46
RFX2P48378 SNORA41B-201ENST00000384785 128 ntBASIC-0.32□□□□□ -2.46
RFX2P48378 MIR4511-201ENST00000582784 87 ntBASIC-0.32□□□□□ -2.46
RFX2P48378 RNU6-92P-201ENST00000605893 104 ntBASIC-0.32□□□□□ -2.46
RFX2P48378 U6.58-201ENST00000613107 107 ntBASIC-0.32□□□□□ -2.46
RFX2P48378 SNORD22.1-201ENST00000516331 125 ntBASIC-0.33□□□□□ -2.46
RFX2P48378 AC103706.3-201ENST00000636297 85 ntBASIC-0.33□□□□□ -2.46
RFX2P48378 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.34□□□□□ -2.46
RFX2P48378 MIR518B-201ENST00000385127 83 ntBASIC-0.34□□□□□ -2.46
RFX2P48378 MIR214-201ENST00000385214 110 ntBASIC-0.34□□□□□ -2.46
RFX2P48378 MIR6779-201ENST00000617283 64 ntBASIC-0.34□□□□□ -2.46
RFX2P48378 RNU6-924P-201ENST00000362926 108 ntBASIC-0.35□□□□□ -2.47
RFX2P48378 SNORA25.5-201ENST00000363782 126 ntBASIC-0.35□□□□□ -2.47
RFX2P48378 RNU7-88P-201ENST00000458752 63 ntBASIC-0.35□□□□□ -2.47
RFX2P48378 SNORD18.2-201ENST00000459604 70 ntBASIC-0.35□□□□□ -2.47
RFX2P48378 RNA5SP192-201ENST00000364404 120 ntBASIC-0.36□□□□□ -2.47
RFX2P48378 SNORD116-16-201ENST00000384533 92 ntBASIC-0.36□□□□□ -2.47
RFX2P48378 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.36□□□□□ -2.47
RFX2P48378 U7.5-201ENST00000517224 61 ntBASIC-0.36□□□□□ -2.47
RFX2P48378 MIR429-201ENST00000362106 83 ntBASIC-0.37□□□□□ -2.47
RFX2P48378 MIR3179-1-201ENST00000578940 84 ntBASIC-0.37□□□□□ -2.47
RFX2P48378 MIR3179-2-201ENST00000579107 84 ntBASIC-0.37□□□□□ -2.47
RFX2P48378 MIR3179-3-201ENST00000579566 84 ntBASIC-0.37□□□□□ -2.47
RFX2P48378 MIR3179-4-201ENST00000617599 84 ntBASIC-0.37□□□□□ -2.47
RFX2P48378 SNORD60.1-201ENST00000362451 73 ntBASIC-0.38□□□□□ -2.47
RFX2P48378 SNORD74.6-201ENST00000364796 70 ntBASIC-0.38□□□□□ -2.47
RFX2P48378 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.38□□□□□ -2.47
RFX2P48378 MIR329-2-201ENST00000385029 84 ntBASIC-0.38□□□□□ -2.47
RFX2P48378 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.38□□□□□ -2.47
RFX2P48378 RNU6-471P-201ENST00000383944 106 ntBASIC-0.39□□□□□ -2.47
RFX2P48378 SNORD75.1-201ENST00000408373 60 ntBASIC-0.39□□□□□ -2.47
RFX2P48378 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.39□□□□□ -2.47
RFX2P48378 AP000533.3-201ENST00000447704 118 ntBASIC-0.39□□□□□ -2.47
RFX2P48378 RNU6-590P-201ENST00000365039 107 ntBASIC-0.4□□□□□ -2.47
RFX2P48378 SNORD126-201ENST00000459475 77 ntBASIC-0.4□□□□□ -2.47
RFX2P48378 AC139453.2-201ENST00000487255 133 ntBASIC-0.4□□□□□ -2.47
RFX2P48378 RNU6-320P-201ENST00000516511 106 ntBASIC-0.4□□□□□ -2.47
RFX2P48378 RNA5SP257-201ENST00000363023 116 ntBASIC-0.41□□□□□ -2.48
RFX2P48378 RNU6-721P-201ENST00000410155 105 ntBASIC-0.41□□□□□ -2.48
RFX2P48378 SNORA13-201ENST00000458790 133 ntBASIC-0.41□□□□□ -2.48
RFX2P48378 RNU6-598P-201ENST00000364017 105 ntBASIC-0.42□□□□□ -2.48
RFX2P48378 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.42□□□□□ -2.48
RFX2P48378 MIR196A2-201ENST00000385189 110 ntBASIC-0.42□□□□□ -2.48
RFX2P48378 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.42□□□□□ -2.48
RFX2P48378 SNORD114-31-201ENST00000363219 75 ntBASIC-0.43□□□□□ -2.48
RFX2P48378 SNORD14C-201ENST00000365382 88 ntBASIC-0.43□□□□□ -2.48
RFX2P48378 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.43□□□□□ -2.48
RFX2P48378 AC110620.1-201ENST00000416042 228 ntBASIC-0.43□□□□□ -2.48
Retrieved 100 of 98,524 protein–RNA pairs in 202.1 ms