Protein–RNA interactions for Protein: P46934

NEDD4, E3 ubiquitin-protein ligase NEDD4, humanhuman

Predictions only

Length 1,319 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4P46934 MIR124-2-201ENST00000385081 109 ntBASIC-0.85□□□□□ -2.54
NEDD4P46934 AC074348.1-201ENST00000426503 132 ntBASIC-0.85□□□□□ -2.54
NEDD4P46934 MIR4464-201ENST00000580818 92 ntBASIC-0.85□□□□□ -2.54
NEDD4P46934 MIR4499-201ENST00000584834 69 ntBASIC-0.85□□□□□ -2.54
NEDD4P46934 MIR1297-201ENST00000637311 77 ntBASIC-0.85□□□□□ -2.54
NEDD4P46934 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.86□□□□□ -2.55
NEDD4P46934 RNU6-431P-201ENST00000383874 107 ntBASIC-0.86□□□□□ -2.55
NEDD4P46934 MIR1468-201ENST00000410600 86 ntBASIC-0.86□□□□□ -2.55
NEDD4P46934 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.87□□□□□ -2.55
NEDD4P46934 Y_RNA.607-201ENST00000410597 98 ntBASIC-0.87□□□□□ -2.55
NEDD4P46934 RNU6-656P-201ENST00000516785 107 ntBASIC-0.87□□□□□ -2.55
NEDD4P46934 uc_338.19-201ENST00000616808 99 ntBASIC-0.87□□□□□ -2.55
NEDD4P46934 AL445584.3-201ENST00000617173 78 ntBASIC-0.87□□□□□ -2.55
NEDD4P46934 MIR6888-201ENST00000621977 67 ntBASIC-0.87□□□□□ -2.55
NEDD4P46934 RNU6-924P-201ENST00000362926 108 ntBASIC-0.88□□□□□ -2.55
NEDD4P46934 RNU6-478P-201ENST00000363904 110 ntBASIC-0.88□□□□□ -2.55
NEDD4P46934 RNY1P1-201ENST00000364372 112 ntBASIC-0.88□□□□□ -2.55
NEDD4P46934 SNORD64-201ENST00000386683 67 ntBASIC-0.88□□□□□ -2.55
NEDD4P46934 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.88□□□□□ -2.55
NEDD4P46934 RNU6-807P-201ENST00000516805 107 ntBASIC-0.88□□□□□ -2.55
NEDD4P46934 RNU6-1236P-201ENST00000517080 99 ntBASIC-0.88□□□□□ -2.55
NEDD4P46934 snoMBII-202.2-201ENST00000517263 86 ntBASIC-0.88□□□□□ -2.55
NEDD4P46934 RNU6-153P-201ENST00000364422 104 ntBASIC-0.89□□□□□ -2.55
NEDD4P46934 RNU6-49P-201ENST00000384256 107 ntBASIC-0.89□□□□□ -2.55
NEDD4P46934 MIR519A2-201ENST00000384990 87 ntBASIC-0.89□□□□□ -2.55
NEDD4P46934 MIR601-201ENST00000385256 79 ntBASIC-0.89□□□□□ -2.55
NEDD4P46934 Y_RNA.593-201ENST00000410292 98 ntBASIC-0.89□□□□□ -2.55
NEDD4P46934 RNU6-518P-201ENST00000516056 96 ntBASIC-0.89□□□□□ -2.55
NEDD4P46934 MIR198-201ENST00000637333 62 ntBASIC-0.89□□□□□ -2.55
NEDD4P46934 RNU6-645P-201ENST00000364649 106 ntBASIC-0.89□□□□□ -2.55
NEDD4P46934 RNU6-24P-201ENST00000384440 107 ntBASIC-0.89□□□□□ -2.55
NEDD4P46934 RNU6-315P-201ENST00000362666 107 ntBASIC-0.9□□□□□ -2.55
NEDD4P46934 RNA5SP192-201ENST00000364404 120 ntBASIC-0.9□□□□□ -2.55
NEDD4P46934 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.9□□□□□ -2.55
NEDD4P46934 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.9□□□□□ -2.55
NEDD4P46934 SCARNA18B-201ENST00000458806 135 ntBASIC-0.9□□□□□ -2.55
NEDD4P46934 MIR3115-201ENST00000577915 68 ntBASIC-0.9□□□□□ -2.55
NEDD4P46934 RNU6-330P-201ENST00000363015 107 ntBASIC-0.91□□□□□ -2.56
NEDD4P46934 SNORA8.1-201ENST00000384250 140 ntBASIC-0.91□□□□□ -2.56
NEDD4P46934 RNY4P30-201ENST00000410216 95 ntBASIC-0.91□□□□□ -2.56
NEDD4P46934 MIR5588-201ENST00000581890 63 ntBASIC-0.91□□□□□ -2.56
NEDD4P46934 MIR382-201ENST00000637119 76 ntBASIC-0.91□□□□□ -2.56
NEDD4P46934 MIR147A-201ENST00000385079 72 ntBASIC-0.92□□□□□ -2.56
NEDD4P46934 U2.7-201ENST00000619197 100 ntBASIC-0.92□□□□□ -2.56
NEDD4P46934 MIR378F-201ENST00000578143 78 ntBASIC-0.93□□□□□ -2.56
NEDD4P46934 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.94□□□□□ -2.56
NEDD4P46934 RNU6-979P-201ENST00000383896 107 ntBASIC-0.94□□□□□ -2.56
NEDD4P46934 MIR3165-201ENST00000579874 75 ntBASIC-0.94□□□□□ -2.56
NEDD4P46934 SNORD45.1-201ENST00000363181 77 ntBASIC-0.95□□□□□ -2.56
NEDD4P46934 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.95□□□□□ -2.56
NEDD4P46934 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.96□□□□□ -2.56
NEDD4P46934 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.96□□□□□ -2.56
NEDD4P46934 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.96□□□□□ -2.56
NEDD4P46934 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.96□□□□□ -2.56
NEDD4P46934 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.96□□□□□ -2.56
NEDD4P46934 RNU7-171P-201ENST00000459581 62 ntBASIC-0.96□□□□□ -2.56
NEDD4P46934 RNA5SP461-201ENST00000516451 104 ntBASIC-0.96□□□□□ -2.56
NEDD4P46934 Y_RNA.73-201ENST00000362910 113 ntBASIC-0.97□□□□□ -2.57
NEDD4P46934 Y_RNA.81-201ENST00000362997 102 ntBASIC-0.97□□□□□ -2.57
NEDD4P46934 SNORD114-17-201ENST00000364699 75 ntBASIC-0.97□□□□□ -2.57
NEDD4P46934 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.98□□□□□ -2.57
NEDD4P46934 MIR548C-201ENST00000384815 97 ntBASIC-0.98□□□□□ -2.57
NEDD4P46934 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.98□□□□□ -2.57
NEDD4P46934 RNU6-604P-201ENST00000390917 100 ntBASIC-0.98□□□□□ -2.57
NEDD4P46934 MIR4484-201ENST00000582855 83 ntBASIC-0.99□□□□□ -2.57
NEDD4P46934 MIR8053-201ENST00000613344 75 ntBASIC-0.99□□□□□ -2.57
NEDD4P46934 U4.2-201ENST00000618561 85 ntBASIC-0.99□□□□□ -2.57
NEDD4P46934 MIR450A2-201ENST00000385022 100 ntBASIC-1□□□□□ -2.57
NEDD4P46934 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.01□□□□□ -2.57
NEDD4P46934 RNU6-294P-201ENST00000364999 102 ntBASIC-1.01□□□□□ -2.57
NEDD4P46934 RNU6-242P-201ENST00000384359 107 ntBASIC-1.01□□□□□ -2.57
NEDD4P46934 MTND4LP1-201ENST00000446263 157 ntBASIC-1.01□□□□□ -2.57
NEDD4P46934 RNU7-134P-201ENST00000458997 64 ntBASIC-1.01□□□□□ -2.57
NEDD4P46934 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.01□□□□□ -2.57
NEDD4P46934 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.01□□□□□ -2.57
NEDD4P46934 SNORD115-33-201ENST00000363723 82 ntBASIC-1.02□□□□□ -2.57
NEDD4P46934 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.02□□□□□ -2.57
NEDD4P46934 RNA5SP180-201ENST00000516181 101 ntBASIC-1.02□□□□□ -2.57
NEDD4P46934 MIR4723-201ENST00000585070 81 ntBASIC-1.02□□□□□ -2.57
NEDD4P46934 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.02□□□□□ -2.57
NEDD4P46934 Y_RNA.369-201ENST00000365568 117 ntBASIC-1.03□□□□□ -2.57
NEDD4P46934 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.03□□□□□ -2.57
NEDD4P46934 SNORA26.4-201ENST00000391188 123 ntBASIC-1.03□□□□□ -2.57
NEDD4P46934 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.03□□□□□ -2.57
NEDD4P46934 RNU6-982P-201ENST00000516216 102 ntBASIC-1.03□□□□□ -2.57
NEDD4P46934 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.03□□□□□ -2.57
NEDD4P46934 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.03□□□□□ -2.57
NEDD4P46934 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.04□□□□□ -2.58
NEDD4P46934 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.04□□□□□ -2.58
NEDD4P46934 RNU7-174P-201ENST00000516248 59 ntBASIC-1.04□□□□□ -2.58
NEDD4P46934 MIR4306-201ENST00000583390 91 ntBASIC-1.04□□□□□ -2.58
NEDD4P46934 MIR1245B-201ENST00000636115 69 ntBASIC-1.04□□□□□ -2.58
NEDD4P46934 RNU6-820P-201ENST00000384273 107 ntBASIC-1.05□□□□□ -2.58
NEDD4P46934 snoU83B.1-201ENST00000517136 88 ntBASIC-1.05□□□□□ -2.58
NEDD4P46934 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.05□□□□□ -2.58
NEDD4P46934 MIR365A-201ENST00000362260 87 ntBASIC-1.06□□□□□ -2.58
NEDD4P46934 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.06□□□□□ -2.58
NEDD4P46934 SNORD115-22-201ENST00000364456 82 ntBASIC-1.06□□□□□ -2.58
NEDD4P46934 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.07□□□□□ -2.58
NEDD4P46934 MIR8485-201ENST00000401372 91 ntBASIC-1.07□□□□□ -2.58
Retrieved 100 of 98,524 protein–RNA pairs in 170.2 ms