Protein–RNA interactions for Protein: P31270

HOXA11, Homeobox protein Hox-A11, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA11P31270 U4.4-201ENST00000620626 117 ntBASIC-0.04□□□□□ -2.42
HOXA11P31270 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.05□□□□□ -2.42
HOXA11P31270 RNU6-518P-201ENST00000516056 96 ntBASIC-0.05□□□□□ -2.42
HOXA11P31270 MIR4511-201ENST00000582784 87 ntBASIC-0.05□□□□□ -2.42
HOXA11P31270 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.05□□□□□ -2.42
HOXA11P31270 AL391099.1-201ENST00000624635 187 ntBASIC-0.05□□□□□ -2.42
HOXA11P31270 AC103706.3-201ENST00000636297 85 ntBASIC-0.05□□□□□ -2.42
HOXA11P31270 SNORD49B-201ENST00000365172 72 ntBASIC-0.06□□□□□ -2.42
HOXA11P31270 RNU6-471P-201ENST00000383944 106 ntBASIC-0.06□□□□□ -2.42
HOXA11P31270 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.06□□□□□ -2.42
HOXA11P31270 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC-0.07□□□□□ -2.42
HOXA11P31270 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.07□□□□□ -2.42
HOXA11P31270 AL353803.5-201ENST00000599815 141 ntBASIC-0.07□□□□□ -2.42
HOXA11P31270 AL590491.3-201ENST00000610731 82 ntBASIC-0.07□□□□□ -2.42
HOXA11P31270 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.08□□□□□ -2.42
HOXA11P31270 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.08□□□□□ -2.42
HOXA11P31270 SNORA62.4-201ENST00000365504 151 ntBASIC-0.08□□□□□ -2.42
HOXA11P31270 SNORD56B-201ENST00000384713 71 ntBASIC-0.08□□□□□ -2.42
HOXA11P31270 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.08□□□□□ -2.42
HOXA11P31270 SNORA32.1-201ENST00000364514 115 ntBASIC-0.09□□□□□ -2.42
HOXA11P31270 MIR4464-201ENST00000580818 92 ntBASIC-0.09□□□□□ -2.42
HOXA11P31270 MIR3666-201ENST00000607845 111 ntBASIC-0.09□□□□□ -2.42
HOXA11P31270 SNORD114-12-201ENST00000365400 75 ntBASIC-0.1□□□□□ -2.43
HOXA11P31270 RNU6-669P-201ENST00000365575 107 ntBASIC-0.1□□□□□ -2.43
HOXA11P31270 SNORD113-2-201ENST00000391082 72 ntBASIC-0.1□□□□□ -2.43
HOXA11P31270 RNA5SP169-201ENST00000517268 117 ntBASIC-0.1□□□□□ -2.43
HOXA11P31270 MIR5704-201ENST00000584029 77 ntBASIC-0.1□□□□□ -2.43
HOXA11P31270 MIR8068-201ENST00000618032 68 ntBASIC-0.1□□□□□ -2.43
HOXA11P31270 snoR1.1-201ENST00000628177 80 ntBASIC-0.1□□□□□ -2.43
HOXA11P31270 SNORD114-11-201ENST00000363738 75 ntBASIC-0.11□□□□□ -2.43
HOXA11P31270 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.11□□□□□ -2.43
HOXA11P31270 MIR548C-201ENST00000384815 97 ntBASIC-0.11□□□□□ -2.43
HOXA11P31270 RNU6ATAC11P-201ENST00000408541 125 ntBASIC-0.11□□□□□ -2.43
HOXA11P31270 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.11□□□□□ -2.43
HOXA11P31270 AL445193.1-201ENST00000441183 141 ntBASIC-0.11□□□□□ -2.43
HOXA11P31270 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.11□□□□□ -2.43
HOXA11P31270 MIR4280-201ENST00000582178 76 ntBASIC-0.11□□□□□ -2.43
HOXA11P31270 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.12□□□□□ -2.43
HOXA11P31270 MIR630-201ENST00000384957 97 ntBASIC-0.12□□□□□ -2.43
HOXA11P31270 SNORD4A-201ENST00000459174 72 ntBASIC-0.12□□□□□ -2.43
HOXA11P31270 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.12□□□□□ -2.43
HOXA11P31270 MIR548AG1-201ENST00000579932 66 ntBASIC-0.12□□□□□ -2.43
HOXA11P31270 MIR4263-201ENST00000584745 83 ntBASIC-0.12□□□□□ -2.43
HOXA11P31270 RNU6-1246P-201ENST00000391064 107 ntBASIC-0.13□□□□□ -2.43
HOXA11P31270 MIR1265-201ENST00000408444 86 ntBASIC-0.13□□□□□ -2.43
HOXA11P31270 AC114755.3-201ENST00000481111 251 ntBASIC-0.13□□□□□ -2.43
HOXA11P31270 MIR6854-201ENST00000614935 69 ntBASIC-0.13□□□□□ -2.43
HOXA11P31270 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.14□□□□□ -2.43
HOXA11P31270 RNA5SP285-201ENST00000516619 119 ntBASIC-0.14□□□□□ -2.43
HOXA11P31270 RNU6-92P-201ENST00000605893 104 ntBASIC-0.14□□□□□ -2.43
HOXA11P31270 MIR6851-201ENST00000617060 67 ntBASIC-0.14□□□□□ -2.43
HOXA11P31270 AL445584.3-201ENST00000617173 78 ntBASIC-0.14□□□□□ -2.43
HOXA11P31270 MIR6888-201ENST00000621977 67 ntBASIC-0.14□□□□□ -2.43
HOXA11P31270 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-0.15□□□□□ -2.43
HOXA11P31270 RNA5SP300-201ENST00000391197 107 ntBASIC-0.15□□□□□ -2.43
HOXA11P31270 AC110620.1-201ENST00000416042 228 ntBASIC-0.15□□□□□ -2.43
HOXA11P31270 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.15□□□□□ -2.43
HOXA11P31270 RNA5SP66-201ENST00000517178 101 ntBASIC-0.15□□□□□ -2.43
HOXA11P31270 SNORA25.5-201ENST00000363782 126 ntBASIC-0.16□□□□□ -2.44
HOXA11P31270 MIR329-2-201ENST00000385029 84 ntBASIC-0.16□□□□□ -2.44
HOXA11P31270 SNORD116-16-201ENST00000384533 92 ntBASIC-0.17□□□□□ -2.44
HOXA11P31270 RNU6-901P-201ENST00000384593 106 ntBASIC-0.17□□□□□ -2.44
HOXA11P31270 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.17□□□□□ -2.44
HOXA11P31270 RNU6-122P-201ENST00000516818 107 ntBASIC-0.17□□□□□ -2.44
HOXA11P31270 MIR4436A-201ENST00000585278 85 ntBASIC-0.17□□□□□ -2.44
HOXA11P31270 Y_RNA.185-201ENST00000363894 100 ntBASIC-0.18□□□□□ -2.44
HOXA11P31270 SNORD74.6-201ENST00000364796 70 ntBASIC-0.18□□□□□ -2.44
HOXA11P31270 SNORD38.3-201ENST00000516599 73 ntBASIC-0.18□□□□□ -2.44
HOXA11P31270 AC108676.2-201ENST00000605225 163 ntBASIC-0.18□□□□□ -2.44
HOXA11P31270 RNU6-246P-201ENST00000384702 107 ntBASIC-0.19□□□□□ -2.44
HOXA11P31270 SNORA41B-201ENST00000384785 128 ntBASIC-0.19□□□□□ -2.44
HOXA11P31270 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
HOXA11P31270 RNU6-788P-201ENST00000390967 104 ntBASIC-0.19□□□□□ -2.44
HOXA11P31270 MIR4802-201ENST00000581881 80 ntBASIC-0.19□□□□□ -2.44
HOXA11P31270 AC093726.3-201ENST00000637588 150 ntBASIC-0.19□□□□□ -2.44
HOXA11P31270 SNORD60.1-201ENST00000362451 73 ntBASIC-0.2□□□□□ -2.44
HOXA11P31270 SNORD114-31-201ENST00000363219 75 ntBASIC-0.2□□□□□ -2.44
HOXA11P31270 MIR214-201ENST00000385214 110 ntBASIC-0.2□□□□□ -2.44
HOXA11P31270 SNORA13-201ENST00000458790 133 ntBASIC-0.2□□□□□ -2.44
HOXA11P31270 MIR196A2-201ENST00000385189 110 ntBASIC-0.21□□□□□ -2.44
HOXA11P31270 MIR6759-201ENST00000638110 65 ntBASIC-0.21□□□□□ -2.44
HOXA11P31270 MIR429-201ENST00000362106 83 ntBASIC-0.22□□□□□ -2.44
HOXA11P31270 RNU6-940P-201ENST00000363433 104 ntBASIC-0.22□□□□□ -2.44
HOXA11P31270 RNA5SP192-201ENST00000364404 120 ntBASIC-0.22□□□□□ -2.44
HOXA11P31270 MIR527-201ENST00000385244 85 ntBASIC-0.22□□□□□ -2.44
HOXA11P31270 MIR4788-201ENST00000639104 80 ntBASIC-0.22□□□□□ -2.44
HOXA11P31270 RNU6-458P-201ENST00000384179 107 ntBASIC-0.23□□□□□ -2.45
HOXA11P31270 RNU6-721P-201ENST00000410155 105 ntBASIC-0.23□□□□□ -2.45
HOXA11P31270 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.23□□□□□ -2.45
HOXA11P31270 U6.58-201ENST00000613107 107 ntBASIC-0.23□□□□□ -2.45
HOXA11P31270 Y_RNA.68-201ENST00000362881 102 ntBASIC-0.24□□□□□ -2.45
HOXA11P31270 RNU6-924P-201ENST00000362926 108 ntBASIC-0.24□□□□□ -2.45
HOXA11P31270 AC125388.1-201ENST00000459631 156 ntBASIC-0.24□□□□□ -2.45
HOXA11P31270 MIR5589-201ENST00000579442 60 ntBASIC-0.24□□□□□ -2.45
HOXA11P31270 MIR4636-201ENST00000582271 80 ntBASIC-0.24□□□□□ -2.45
HOXA11P31270 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.25□□□□□ -2.45
HOXA11P31270 Y_RNA.340-201ENST00000365330 92 ntBASIC-0.25□□□□□ -2.45
HOXA11P31270 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.25□□□□□ -2.45
HOXA11P31270 MIR518B-201ENST00000385127 83 ntBASIC-0.25□□□□□ -2.45
HOXA11P31270 TRAJ57-201ENST00000390482 63 ntAPPRIS P1 BASIC-0.25□□□□□ -2.45
Retrieved 100 of 98,524 protein–RNA pairs in 177.4 ms