Protein–RNA interactions for Protein: P27694

RPA1, Replication protein A 70 kDa DNA-binding subunit, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1P27694 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.75□□□□□ -2.53
RPA1P27694 Y_RNA.81-201ENST00000362997 102 ntBASIC-0.76□□□□□ -2.53
RPA1P27694 SNORD115-22-201ENST00000364456 82 ntBASIC-0.76□□□□□ -2.53
RPA1P27694 RNU6-787P-201ENST00000384032 107 ntBASIC-0.76□□□□□ -2.53
RPA1P27694 SNORD64-201ENST00000386683 67 ntBASIC-0.76□□□□□ -2.53
RPA1P27694 RNU7-154P-201ENST00000516194 62 ntBASIC-0.76□□□□□ -2.53
RPA1P27694 MIR5582-201ENST00000579697 68 ntBASIC-0.76□□□□□ -2.53
RPA1P27694 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.76□□□□□ -2.53
RPA1P27694 Y_RNA.433-201ENST00000384089 102 ntBASIC-0.77□□□□□ -2.53
RPA1P27694 SNORA13-201ENST00000458790 133 ntBASIC-0.77□□□□□ -2.53
RPA1P27694 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-0.77□□□□□ -2.53
RPA1P27694 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.77□□□□□ -2.53
RPA1P27694 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.78□□□□□ -2.53
RPA1P27694 MIR196A1-201ENST00000388006 70 ntBASIC-0.78□□□□□ -2.53
RPA1P27694 RNU6-1298P-201ENST00000362456 101 ntBASIC-0.79□□□□□ -2.54
RPA1P27694 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.79□□□□□ -2.54
RPA1P27694 MIR548C-201ENST00000384815 97 ntBASIC-0.79□□□□□ -2.54
RPA1P27694 RNU7-171P-201ENST00000459581 62 ntBASIC-0.79□□□□□ -2.54
RPA1P27694 RNU7-174P-201ENST00000516248 59 ntBASIC-0.79□□□□□ -2.54
RPA1P27694 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.8□□□□□ -2.54
RPA1P27694 RNU6-294P-201ENST00000364999 102 ntBASIC-0.8□□□□□ -2.54
RPA1P27694 SNORD45A-201ENST00000384512 84 ntBASIC-0.8□□□□□ -2.54
RPA1P27694 AL021921.1-201ENST00000442774 93 ntBASIC-0.8□□□□□ -2.54
RPA1P27694 RNU7-88P-201ENST00000458752 63 ntBASIC-0.8□□□□□ -2.54
RPA1P27694 SCARNA20.2-201ENST00000516052 116 ntBASIC-0.8□□□□□ -2.54
RPA1P27694 MIR4712-201ENST00000583750 82 ntBASIC-0.8□□□□□ -2.54
RPA1P27694 AC062037.1-201ENST00000605302 128 ntBASIC-0.8□□□□□ -2.54
RPA1P27694 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.81□□□□□ -2.54
RPA1P27694 Y_RNA.426-201ENST00000384068 113 ntBASIC-0.81□□□□□ -2.54
RPA1P27694 RNA5SP25-201ENST00000410815 110 ntBASIC-0.81□□□□□ -2.54
RPA1P27694 AP002795.1-201ENST00000534879 84 ntBASIC-0.81□□□□□ -2.54
RPA1P27694 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.82□□□□□ -2.54
RPA1P27694 MIR147A-201ENST00000385079 72 ntBASIC-0.82□□□□□ -2.54
RPA1P27694 SNORD63.1-201ENST00000516178 80 ntBASIC-0.82□□□□□ -2.54
RPA1P27694 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.82□□□□□ -2.54
RPA1P27694 RNA5SP395-201ENST00000516567 118 ntBASIC-0.82□□□□□ -2.54
RPA1P27694 U7.5-201ENST00000517224 61 ntBASIC-0.82□□□□□ -2.54
RPA1P27694 U4.4-201ENST00000620626 117 ntBASIC-0.82□□□□□ -2.54
RPA1P27694 RNU6-315P-201ENST00000362666 107 ntBASIC-0.83□□□□□ -2.54
RPA1P27694 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.83□□□□□ -2.54
RPA1P27694 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.83□□□□□ -2.54
RPA1P27694 SNORD113.1-201ENST00000363280 73 ntBASIC-0.84□□□□□ -2.54
RPA1P27694 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.84□□□□□ -2.54
RPA1P27694 MIR1245B-201ENST00000636115 69 ntBASIC-0.84□□□□□ -2.54
RPA1P27694 RNU6-1276P-201ENST00000365372 104 ntBASIC-0.85□□□□□ -2.55
RPA1P27694 SNORD83B-201ENST00000386745 93 ntBASIC-0.85□□□□□ -2.55
RPA1P27694 SNORD19-201ENST00000391191 68 ntBASIC-0.85□□□□□ -2.55
RPA1P27694 MIR548AX-201ENST00000580117 73 ntBASIC-0.85□□□□□ -2.55
RPA1P27694 MIR382-201ENST00000637119 76 ntBASIC-0.85□□□□□ -2.55
RPA1P27694 RNU6-924P-201ENST00000362926 108 ntBASIC-0.86□□□□□ -2.55
RPA1P27694 MIR450A2-201ENST00000385022 100 ntBASIC-0.86□□□□□ -2.55
RPA1P27694 RNU6-587P-201ENST00000391282 106 ntBASIC-0.86□□□□□ -2.55
RPA1P27694 SCARNA17-201ENST00000516183 144 ntBASIC-0.86□□□□□ -2.55
RPA1P27694 Y_RNA.694-201ENST00000516677 117 ntBASIC-0.86□□□□□ -2.55
RPA1P27694 RNU6-807P-201ENST00000516805 107 ntBASIC-0.86□□□□□ -2.55
RPA1P27694 MIR3134-201ENST00000579433 74 ntBASIC-0.86□□□□□ -2.55
RPA1P27694 MIR548V-201ENST00000584165 80 ntBASIC-0.86□□□□□ -2.55
RPA1P27694 MIR6086-201ENST00000638065 55 ntBASIC-0.86□□□□□ -2.55
RPA1P27694 SNORD114-15-201ENST00000364687 72 ntBASIC-0.87□□□□□ -2.55
RPA1P27694 Y_RNA.369-201ENST00000365568 117 ntBASIC-0.87□□□□□ -2.55
RPA1P27694 RNU6-30P-201ENST00000384561 107 ntBASIC-0.87□□□□□ -2.55
RPA1P27694 Y_RNA.613-201ENST00000410726 97 ntBASIC-0.87□□□□□ -2.55
RPA1P27694 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.87□□□□□ -2.55
RPA1P27694 MIR4666B-201ENST00000578142 81 ntBASIC-0.87□□□□□ -2.55
RPA1P27694 MIR1297-201ENST00000637311 77 ntBASIC-0.87□□□□□ -2.55
RPA1P27694 SNORD115-31-201ENST00000365318 82 ntBASIC-0.88□□□□□ -2.55
RPA1P27694 MIR630-201ENST00000384957 97 ntBASIC-0.88□□□□□ -2.55
RPA1P27694 RNU6-1238P-201ENST00000517215 102 ntBASIC-0.88□□□□□ -2.55
RPA1P27694 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.89□□□□□ -2.55
RPA1P27694 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.89□□□□□ -2.55
RPA1P27694 SNORD116-24-201ENST00000384549 92 ntBASIC-0.89□□□□□ -2.55
RPA1P27694 SNORA26.4-201ENST00000391188 123 ntBASIC-0.89□□□□□ -2.55
RPA1P27694 RNU7-134P-201ENST00000458997 64 ntBASIC-0.89□□□□□ -2.55
RPA1P27694 RNU6-732P-201ENST00000516033 103 ntBASIC-0.89□□□□□ -2.55
RPA1P27694 RNU6-1174P-201ENST00000517278 101 ntBASIC-0.89□□□□□ -2.55
RPA1P27694 Y_RNA.109-201ENST00000363215 102 ntBASIC-0.9□□□□□ -2.55
RPA1P27694 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.9□□□□□ -2.55
RPA1P27694 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.9□□□□□ -2.55
RPA1P27694 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.91□□□□□ -2.56
RPA1P27694 RNU6-458P-201ENST00000384179 107 ntBASIC-0.91□□□□□ -2.56
RPA1P27694 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.91□□□□□ -2.56
RPA1P27694 U6.58-201ENST00000613107 107 ntBASIC-0.91□□□□□ -2.56
RPA1P27694 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.92□□□□□ -2.56
RPA1P27694 RNU6-1233P-201ENST00000362922 102 ntBASIC-0.92□□□□□ -2.56
RPA1P27694 SNORD73B-201ENST00000364394 72 ntBASIC-0.92□□□□□ -2.56
RPA1P27694 Y_RNA.236-201ENST00000364427 111 ntBASIC-0.92□□□□□ -2.56
RPA1P27694 RNU6-70P-201ENST00000516438 60 ntBASIC-0.92□□□□□ -2.56
RPA1P27694 RNU6-698P-201ENST00000363523 107 ntBASIC-0.93□□□□□ -2.56
RPA1P27694 RNU6-598P-201ENST00000364017 105 ntBASIC-0.93□□□□□ -2.56
RPA1P27694 RNU6-34P-201ENST00000364874 107 ntBASIC-0.93□□□□□ -2.56
RPA1P27694 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.93□□□□□ -2.56
RPA1P27694 RNU6-573P-201ENST00000383938 106 ntBASIC-0.93□□□□□ -2.56
RPA1P27694 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.93□□□□□ -2.56
RPA1P27694 MIR4499-201ENST00000584834 69 ntBASIC-0.93□□□□□ -2.56
RPA1P27694 SNORD115-33-201ENST00000363723 82 ntBASIC-0.94□□□□□ -2.56
RPA1P27694 SNORD113-2-201ENST00000391082 72 ntBASIC-0.94□□□□□ -2.56
RPA1P27694 snoU13.19-201ENST00000459148 104 ntBASIC-0.94□□□□□ -2.56
RPA1P27694 RNU6-687P-201ENST00000516443 89 ntBASIC-0.94□□□□□ -2.56
RPA1P27694 RNA5SP170-201ENST00000517150 101 ntBASIC-0.94□□□□□ -2.56
RPA1P27694 MIR4324-201ENST00000584846 72 ntBASIC-0.94□□□□□ -2.56
Retrieved 100 of 98,524 protein–RNA pairs in 176.2 ms