Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 MIR655-201ENST00000362159 97 ntBASIC-0.45□□□□□ -2.48
VAMP1P23763 RNU6-656P-201ENST00000516785 107 ntBASIC-0.45□□□□□ -2.48
VAMP1P23763 RNU6-411P-201ENST00000384451 107 ntBASIC-0.46□□□□□ -2.48
VAMP1P23763 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.46□□□□□ -2.48
VAMP1P23763 RNU6-279P-201ENST00000391297 101 ntBASIC-0.46□□□□□ -2.48
VAMP1P23763 AC093726.3-201ENST00000637588 150 ntBASIC-0.46□□□□□ -2.48
VAMP1P23763 RNA5SP300-201ENST00000391197 107 ntBASIC-0.47□□□□□ -2.48
VAMP1P23763 RNU6-587P-201ENST00000391282 106 ntBASIC-0.47□□□□□ -2.48
VAMP1P23763 RNU4-63P-201ENST00000411313 118 ntBASIC-0.47□□□□□ -2.48
VAMP1P23763 AC090617.8-201ENST00000623339 167 ntBASIC-0.47□□□□□ -2.48
VAMP1P23763 SNORD95.1-201ENST00000364099 68 ntBASIC-0.48□□□□□ -2.49
VAMP1P23763 RNU6-668P-201ENST00000364180 107 ntBASIC-0.48□□□□□ -2.49
VAMP1P23763 SNORD45A-201ENST00000384512 84 ntBASIC-0.48□□□□□ -2.49
VAMP1P23763 RNU6-982P-201ENST00000516216 102 ntBASIC-0.48□□□□□ -2.49
VAMP1P23763 RNU6-881P-201ENST00000516813 102 ntBASIC-0.48□□□□□ -2.49
VAMP1P23763 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
VAMP1P23763 RNA5SP225-201ENST00000410874 135 ntBASIC-0.49□□□□□ -2.49
VAMP1P23763 AL021921.1-201ENST00000442774 93 ntBASIC-0.49□□□□□ -2.49
VAMP1P23763 RNU6-518P-201ENST00000516056 96 ntBASIC-0.49□□□□□ -2.49
VAMP1P23763 MIR3134-201ENST00000579433 74 ntBASIC-0.49□□□□□ -2.49
VAMP1P23763 SNORD113.1-201ENST00000363280 73 ntBASIC-0.5□□□□□ -2.49
VAMP1P23763 SNORD115-22-201ENST00000364456 82 ntBASIC-0.5□□□□□ -2.49
VAMP1P23763 MIR204-201ENST00000385200 110 ntBASIC-0.5□□□□□ -2.49
VAMP1P23763 SNORA62.4-201ENST00000365504 151 ntBASIC-0.51□□□□□ -2.49
VAMP1P23763 SNORD56B-201ENST00000384713 71 ntBASIC-0.51□□□□□ -2.49
VAMP1P23763 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.52□□□□□ -2.49
VAMP1P23763 RNY1P9-201ENST00000532431 109 ntBASIC-0.53□□□□□ -2.49
VAMP1P23763 AL353803.5-201ENST00000599815 141 ntBASIC-0.53□□□□□ -2.49
VAMP1P23763 MIR6854-201ENST00000614935 69 ntBASIC-0.53□□□□□ -2.49
VAMP1P23763 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.53□□□□□ -2.49
VAMP1P23763 SNORA32.3-201ENST00000384772 121 ntBASIC-0.54□□□□□ -2.5
VAMP1P23763 SNORD115-23-201ENST00000364461 82 ntBASIC-0.55□□□□□ -2.5
VAMP1P23763 SCARNA21.1-201ENST00000515996 128 ntBASIC-0.55□□□□□ -2.5
VAMP1P23763 AL590491.3-201ENST00000610731 82 ntBASIC-0.55□□□□□ -2.5
VAMP1P23763 Y_RNA.545-201ENST00000384652 105 ntBASIC-0.56□□□□□ -2.5
VAMP1P23763 MIR196A2-201ENST00000385189 110 ntBASIC-0.56□□□□□ -2.5
VAMP1P23763 RNU6-1089P-201ENST00000516473 104 ntBASIC-0.56□□□□□ -2.5
VAMP1P23763 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.56□□□□□ -2.5
VAMP1P23763 MIR5704-201ENST00000584029 77 ntBASIC-0.56□□□□□ -2.5
VAMP1P23763 RNU6-1216P-201ENST00000362590 107 ntBASIC-0.57□□□□□ -2.5
VAMP1P23763 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.57□□□□□ -2.5
VAMP1P23763 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-0.57□□□□□ -2.5
VAMP1P23763 RNU7-154P-201ENST00000516194 62 ntBASIC-0.58□□□□□ -2.5
VAMP1P23763 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.58□□□□□ -2.5
VAMP1P23763 U2.7-201ENST00000619197 100 ntBASIC-0.59□□□□□ -2.5
VAMP1P23763 MIR4662A-201ENST00000637499 67 ntBASIC-0.59□□□□□ -2.5
VAMP1P23763 MIR517B-201ENST00000385102 67 ntBASIC-0.6□□□□□ -2.51
VAMP1P23763 SNORD126-201ENST00000459475 77 ntBASIC-0.6□□□□□ -2.51
VAMP1P23763 MIR519A2-201ENST00000384990 87 ntBASIC-0.61□□□□□ -2.51
VAMP1P23763 RNU6-871P-201ENST00000516122 100 ntBASIC-0.61□□□□□ -2.51
VAMP1P23763 MIR889-201ENST00000401280 79 ntBASIC-0.62□□□□□ -2.51
VAMP1P23763 SNORD38.3-201ENST00000516599 73 ntBASIC-0.62□□□□□ -2.51
VAMP1P23763 MIR548V-201ENST00000584165 80 ntBASIC-0.62□□□□□ -2.51
VAMP1P23763 MIR6851-201ENST00000617060 67 ntBASIC-0.62□□□□□ -2.51
VAMP1P23763 SNORD114-11-201ENST00000363738 75 ntBASIC-0.63□□□□□ -2.51
VAMP1P23763 RNU6-687P-201ENST00000516443 89 ntBASIC-0.63□□□□□ -2.51
VAMP1P23763 MIR548AX-201ENST00000580117 73 ntBASIC-0.63□□□□□ -2.51
VAMP1P23763 MIR4280-201ENST00000582178 76 ntBASIC-0.63□□□□□ -2.51
VAMP1P23763 MIR409-201ENST00000362237 79 ntBASIC-0.64□□□□□ -2.51
VAMP1P23763 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.64□□□□□ -2.51
VAMP1P23763 RNA5SP266-201ENST00000410273 108 ntBASIC-0.64□□□□□ -2.51
VAMP1P23763 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.65□□□□□ -2.51
VAMP1P23763 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.65□□□□□ -2.51
VAMP1P23763 Y_RNA.457-201ENST00000384237 111 ntBASIC-0.65□□□□□ -2.51
VAMP1P23763 MT-TQ-201ENST00000387372 72 ntBASIC-0.65□□□□□ -2.51
VAMP1P23763 RNU6-1015P-201ENST00000517121 99 ntBASIC-0.65□□□□□ -2.51
VAMP1P23763 RNA5SP215-201ENST00000363440 122 ntBASIC-0.66□□□□□ -2.52
VAMP1P23763 Y_RNA.514-201ENST00000384528 112 ntBASIC-0.67□□□□□ -2.52
VAMP1P23763 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-0.67□□□□□ -2.52
VAMP1P23763 SNX3P1X-201ENST00000414887 175 ntBASIC-0.67□□□□□ -2.52
VAMP1P23763 RNA5SP331-201ENST00000364986 107 ntBASIC-0.68□□□□□ -2.52
VAMP1P23763 MIR518B-201ENST00000385127 83 ntBASIC-0.68□□□□□ -2.52
VAMP1P23763 RNU6-284P-201ENST00000411105 106 ntBASIC-0.68□□□□□ -2.52
VAMP1P23763 SNORA13-201ENST00000458790 133 ntBASIC-0.68□□□□□ -2.52
VAMP1P23763 SNORD115-31-201ENST00000365318 82 ntBASIC-0.69□□□□□ -2.52
VAMP1P23763 SNORD14C-201ENST00000365382 88 ntBASIC-0.7□□□□□ -2.52
VAMP1P23763 Y_RNA.583-201ENST00000391033 113 ntBASIC-0.7□□□□□ -2.52
VAMP1P23763 AC114755.3-201ENST00000481111 251 ntBASIC-0.7□□□□□ -2.52
VAMP1P23763 AC021146.6-201ENST00000514659 117 ntBASIC-0.7□□□□□ -2.52
VAMP1P23763 MIR124-2-201ENST00000385081 109 ntBASIC-0.71□□□□□ -2.52
VAMP1P23763 RNU6-634P-201ENST00000459134 106 ntBASIC-0.71□□□□□ -2.52
VAMP1P23763 MIR8068-201ENST00000618032 68 ntBASIC-0.71□□□□□ -2.52
VAMP1P23763 SNORD18.2-201ENST00000459604 70 ntBASIC-0.72□□□□□ -2.52
VAMP1P23763 MIR6738-201ENST00000619620 64 ntBASIC-0.72□□□□□ -2.52
VAMP1P23763 RNU6-776P-201ENST00000364403 104 ntBASIC-0.73□□□□□ -2.53
VAMP1P23763 RNU6-1022P-201ENST00000365049 104 ntBASIC-0.73□□□□□ -2.53
VAMP1P23763 RNU6-10P-201ENST00000384036 107 ntBASIC-0.73□□□□□ -2.53
VAMP1P23763 SNORD113-2-201ENST00000391082 72 ntBASIC-0.73□□□□□ -2.53
VAMP1P23763 RNU7-174P-201ENST00000516248 59 ntBASIC-0.73□□□□□ -2.53
VAMP1P23763 RNU6-698P-201ENST00000363523 107 ntBASIC-0.74□□□□□ -2.53
VAMP1P23763 SNORD74.6-201ENST00000364796 70 ntBASIC-0.74□□□□□ -2.53
VAMP1P23763 RNU6-34P-201ENST00000364874 107 ntBASIC-0.74□□□□□ -2.53
VAMP1P23763 MIR587-201ENST00000384845 96 ntBASIC-0.74□□□□□ -2.53
VAMP1P23763 MIR4324-201ENST00000584846 72 ntBASIC-0.74□□□□□ -2.53
VAMP1P23763 MIR429-201ENST00000362106 83 ntBASIC-0.75□□□□□ -2.53
VAMP1P23763 RNU6-924P-201ENST00000362926 108 ntBASIC-0.75□□□□□ -2.53
VAMP1P23763 RNU6-663P-201ENST00000391105 106 ntBASIC-0.75□□□□□ -2.53
VAMP1P23763 SNORD30.1-201ENST00000391309 70 ntBASIC-0.75□□□□□ -2.53
VAMP1P23763 RNU6-1275P-201ENST00000391087 107 ntBASIC-0.76□□□□□ -2.53
VAMP1P23763 MIR3179-1-201ENST00000578940 84 ntBASIC-0.76□□□□□ -2.53
Retrieved 100 of 98,524 protein–RNA pairs in 11.3 ms