Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC-6.89□□□□□ -3.51
TOP2AP11388 RNU6-373P-201ENST00000411247 98 ntBASIC-6.89□□□□□ -3.51
TOP2AP11388 Y_RNA.15-201ENST00000362420 102 ntBASIC-6.91□□□□□ -3.51
TOP2AP11388 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-6.91□□□□□ -3.51
TOP2AP11388 SEPT14P3-201ENST00000439401 183 ntBASIC-6.91□□□□□ -3.51
TOP2AP11388 AL732372.2-207ENST00000445840 183 ntBASIC-6.91□□□□□ -3.51
TOP2AP11388 SEPT14P2-201ENST00000453405 183 ntBASIC-6.91□□□□□ -3.51
TOP2AP11388 SCARNA23-201ENST00000516060 130 ntBASIC-6.91□□□□□ -3.51
TOP2AP11388 FO082796.1-201ENST00000523795 183 ntBASIC-6.91□□□□□ -3.51
TOP2AP11388 Y_RNA.262-201ENST00000364641 102 ntBASIC-6.91□□□□□ -3.52
TOP2AP11388 Y_RNA.565-201ENST00000384719 101 ntBASIC-6.91□□□□□ -3.52
TOP2AP11388 U6atac.1-201ENST00000616025 117 ntBASIC-6.92□□□□□ -3.52
TOP2AP11388 Y_RNA.485-201ENST00000384395 102 ntBASIC-6.95□□□□□ -3.52
TOP2AP11388 MTND2P14-201ENST00000482139 351 ntBASIC-6.95□□□□□ -3.52
TOP2AP11388 Y_RNA.337-201ENST00000365312 102 ntBASIC-6.96□□□□□ -3.52
TOP2AP11388 SNORA40.14-201ENST00000516543 86 ntBASIC-6.96□□□□□ -3.52
TOP2AP11388 RNU6-450P-201ENST00000364654 107 ntBASIC-6.97□□□□□ -3.53
TOP2AP11388 RNU6-275P-201ENST00000364910 107 ntBASIC-6.97□□□□□ -3.53
TOP2AP11388 MIR548F5-201ENST00000408421 86 ntBASIC-6.97□□□□□ -3.53
TOP2AP11388 MIR1297-201ENST00000637311 77 ntBASIC-6.97□□□□□ -3.53
TOP2AP11388 RNU6-557P-201ENST00000516842 110 ntBASIC-6.98□□□□□ -3.53
TOP2AP11388 AC104985.2-201ENST00000620598 500 ntBASIC-6.98□□□□□ -3.53
TOP2AP11388 Y_RNA.96-201ENST00000363092 109 ntBASIC-7□□□□□ -3.53
TOP2AP11388 RNU6-1325P-201ENST00000364905 105 ntBASIC-7□□□□□ -3.53
TOP2AP11388 NBR2-204ENST00000587322 63 ntBASIC-7□□□□□ -3.53
TOP2AP11388 RNU6-686P-201ENST00000364839 107 ntBASIC-7.01□□□□□ -3.53
TOP2AP11388 RNU6-1314P-201ENST00000517139 104 ntBASIC-7.01□□□□□ -3.53
TOP2AP11388 SNORD116-24-201ENST00000384549 92 ntBASIC-7.01□□□□□ -3.53
TOP2AP11388 RNU6-806P-201ENST00000365147 105 ntBASIC-7.02□□□□□ -3.53
TOP2AP11388 AC139792.2-201ENST00000624218 587 ntBASIC-7.02□□□□□ -3.53
TOP2AP11388 RNU6-1085P-201ENST00000363576 107 ntBASIC-7.03□□□□□ -3.54
TOP2AP11388 AL117187.1-201ENST00000555482 181 ntBASIC-7.03□□□□□ -3.54
TOP2AP11388 MIR4801-201ENST00000582704 82 ntBASIC-7.03□□□□□ -3.54
TOP2AP11388 AC130289.1-201ENST00000577321 73 ntBASIC-7.04□□□□□ -3.54
TOP2AP11388 MIR4679-2-201ENST00000578358 77 ntBASIC-7.04□□□□□ -3.54
TOP2AP11388 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-7.04□□□□□ -3.54
TOP2AP11388 Y_RNA.88-201ENST00000363029 99 ntBASIC-7.05□□□□□ -3.54
TOP2AP11388 Y_RNA.339-201ENST00000365325 102 ntBASIC-7.05□□□□□ -3.54
TOP2AP11388 RNU6-699P-201ENST00000517081 110 ntBASIC-7.05□□□□□ -3.54
TOP2AP11388 RNU6-979P-201ENST00000383896 107 ntBASIC-7.06□□□□□ -3.54
TOP2AP11388 MIR4484-201ENST00000582855 83 ntBASIC-7.06□□□□□ -3.54
TOP2AP11388 MIR4282-201ENST00000583613 67 ntBASIC-7.06□□□□□ -3.54
TOP2AP11388 Y_RNA.44-201ENST00000362676 108 ntBASIC-7.06□□□□□ -3.54
TOP2AP11388 Y_RNA.532-201ENST00000384590 113 ntBASIC-7.06□□□□□ -3.54
TOP2AP11388 RNY3P10-201ENST00000384764 102 ntBASIC-7.06□□□□□ -3.54
TOP2AP11388 RNU6-1015P-201ENST00000517121 99 ntBASIC-7.06□□□□□ -3.54
TOP2AP11388 Y_RNA.16-201ENST00000362421 102 ntBASIC-7.07□□□□□ -3.54
TOP2AP11388 RNU6-890P-201ENST00000384121 107 ntBASIC-7.07□□□□□ -3.54
TOP2AP11388 AL162413.1-201ENST00000603198 110 ntBASIC-7.07□□□□□ -3.54
TOP2AP11388 MIR5009-201ENST00000578736 100 ntBASIC-7.08□□□□□ -3.54
TOP2AP11388 MIRLET7A1-201ENST00000362295 80 ntBASIC-7.11□□□□□ -3.55
TOP2AP11388 AC040904.1-201ENST00000590850 223 ntBASIC-7.11□□□□□ -3.55
TOP2AP11388 AC078883.4-201ENST00000623218 367 ntBASIC-7.11□□□□□ -3.55
TOP2AP11388 RNU6-451P-201ENST00000362921 107 ntBASIC-7.11□□□□□ -3.55
TOP2AP11388 SNORD113-6-201ENST00000363345 75 ntBASIC-7.12□□□□□ -3.55
TOP2AP11388 Y_RNA.219-201ENST00000364232 113 ntBASIC-7.12□□□□□ -3.55
TOP2AP11388 SNORD37.2-201ENST00000391075 66 ntBASIC-7.12□□□□□ -3.55
TOP2AP11388 RNU6-908P-201ENST00000410160 94 ntBASIC-7.12□□□□□ -3.55
TOP2AP11388 RNY3P16-201ENST00000516338 101 ntBASIC-7.12□□□□□ -3.55
TOP2AP11388 PLS1-AS1-201ENST00000485338 346 ntTSL 3 BASIC-7.13□□□□□ -3.55
TOP2AP11388 AL035470.1-201ENST00000622571 220 ntBASIC-7.13□□□□□ -3.55
TOP2AP11388 Z69908.1-201ENST00000622603 247 ntBASIC-7.13□□□□□ -3.55
TOP2AP11388 RNU6-121P-201ENST00000410525 99 ntBASIC-7.14□□□□□ -3.55
TOP2AP11388 MIR4528-201ENST00000577763 90 ntBASIC-7.14□□□□□ -3.55
TOP2AP11388 MIR559-201ENST00000385188 96 ntBASIC-7.15□□□□□ -3.55
TOP2AP11388 Y_RNA.693-201ENST00000516641 110 ntBASIC-7.15□□□□□ -3.55
TOP2AP11388 MIR664A-201ENST00000626086 82 ntBASIC-7.15□□□□□ -3.55
TOP2AP11388 Y_RNA.154-201ENST00000363624 102 ntBASIC-7.16□□□□□ -3.56
TOP2AP11388 RNU6-895P-201ENST00000384125 103 ntBASIC-7.16□□□□□ -3.56
TOP2AP11388 MIR548H4-201ENST00000408689 111 ntBASIC-7.16□□□□□ -3.56
TOP2AP11388 RNU6-659P-201ENST00000516454 104 ntBASIC-7.17□□□□□ -3.56
TOP2AP11388 Y_RNA.722-201ENST00000517279 114 ntBASIC-7.17□□□□□ -3.56
TOP2AP11388 RNU6-1257P-201ENST00000384625 110 ntBASIC-7.18□□□□□ -3.56
TOP2AP11388 RNU6-1255P-201ENST00000363434 112 ntBASIC-7.19□□□□□ -3.56
TOP2AP11388 SCARNA15.1-201ENST00000516384 125 ntBASIC-7.19□□□□□ -3.56
TOP2AP11388 RNU6-122P-201ENST00000516818 107 ntBASIC-7.19□□□□□ -3.56
TOP2AP11388 SNORD116.3-201ENST00000517176 78 ntBASIC-7.19□□□□□ -3.56
TOP2AP11388 SNORD58B-201ENST00000607313 66 ntBASIC-7.2□□□□□ -3.56
TOP2AP11388 RNU6-627P-201ENST00000364032 102 ntBASIC-7.21□□□□□ -3.56
TOP2AP11388 RNU6-1326P-201ENST00000391262 107 ntBASIC-7.21□□□□□ -3.56
TOP2AP11388 MIR5690-201ENST00000583739 73 ntBASIC-7.21□□□□□ -3.56
TOP2AP11388 RNU6-574P-201ENST00000384265 107 ntBASIC-7.22□□□□□ -3.56
TOP2AP11388 AP003461.1-201ENST00000528866 78 ntBASIC-7.22□□□□□ -3.56
TOP2AP11388 RNU6-483P-201ENST00000384088 108 ntBASIC-7.22□□□□□ -3.57
TOP2AP11388 RNU6-1211P-201ENST00000459179 105 ntBASIC-7.22□□□□□ -3.57
TOP2AP11388 RNU6-633P-201ENST00000362612 103 ntBASIC-7.23□□□□□ -3.57
TOP2AP11388 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-7.23□□□□□ -3.57
TOP2AP11388 Y_RNA.406-201ENST00000383984 100 ntBASIC-7.24□□□□□ -3.57
TOP2AP11388 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC-7.24□□□□□ -3.57
TOP2AP11388 MIR548X-201ENST00000580069 75 ntBASIC-7.25□□□□□ -3.57
TOP2AP11388 SNORA25.5-201ENST00000363782 126 ntBASIC-7.26□□□□□ -3.57
TOP2AP11388 RNU6-1188P-201ENST00000363795 107 ntBASIC-7.26□□□□□ -3.57
TOP2AP11388 RNU6-380P-201ENST00000410207 107 ntBASIC-7.27□□□□□ -3.57
TOP2AP11388 SNORD127-201ENST00000458892 86 ntBASIC-7.27□□□□□ -3.57
TOP2AP11388 RNU6-915P-201ENST00000364943 103 ntBASIC-7.29□□□□□ -3.58
TOP2AP11388 Y_RNA.345-201ENST00000365384 92 ntBASIC-7.29□□□□□ -3.58
TOP2AP11388 AL158147.1-201ENST00000443970 75 ntBASIC-7.29□□□□□ -3.58
TOP2AP11388 RNU7-61P-201ENST00000515897 61 ntBASIC-7.3□□□□□ -3.58
TOP2AP11388 MIR154-201ENST00000385243 84 ntBASIC-7.31□□□□□ -3.58
TOP2AP11388 AC015540.1-201ENST00000615828 501 ntBASIC-7.31□□□□□ -3.58
Retrieved 100 of 98,524 protein–RNA pairs in 169.8 ms