Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 MIR548X-201ENST00000580069 75 ntBASIC0.8□□□□□ -2.28
CSB-PGBD3P0DP91 MIR8087-201ENST00000612745 78 ntBASIC0.8□□□□□ -2.28
CSB-PGBD3P0DP91 U2.18-201ENST00000622185 84 ntBASIC0.79□□□□□ -2.28
CSB-PGBD3P0DP91 MIR429-201ENST00000362106 83 ntBASIC0.78□□□□□ -2.28
CSB-PGBD3P0DP91 MIR106A-201ENST00000384870 81 ntBASIC0.78□□□□□ -2.28
CSB-PGBD3P0DP91 MIR579-201ENST00000385221 98 ntBASIC0.78□□□□□ -2.28
CSB-PGBD3P0DP91 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.78□□□□□ -2.28
CSB-PGBD3P0DP91 MIR5087-201ENST00000635826 76 ntBASIC0.78□□□□□ -2.28
CSB-PGBD3P0DP91 MIR103A1-201ENST00000362165 78 ntBASIC0.77□□□□□ -2.29
CSB-PGBD3P0DP91 SNORA68.3-201ENST00000515906 83 ntBASIC0.77□□□□□ -2.29
CSB-PGBD3P0DP91 RNU6-863P-201ENST00000515989 104 ntBASIC0.77□□□□□ -2.29
CSB-PGBD3P0DP91 Y_RNA.698-201ENST00000516798 118 ntBASIC0.77□□□□□ -2.29
CSB-PGBD3P0DP91 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.76□□□□□ -2.29
CSB-PGBD3P0DP91 MIR4432-201ENST00000581823 84 ntBASIC0.74□□□□□ -2.29
CSB-PGBD3P0DP91 DLEU2_4.2-201ENST00000616613 58 ntBASIC0.74□□□□□ -2.29
CSB-PGBD3P0DP91 MIR330-201ENST00000362196 94 ntBASIC0.73□□□□□ -2.29
CSB-PGBD3P0DP91 RNU7-151P-201ENST00000516930 53 ntBASIC0.73□□□□□ -2.29
CSB-PGBD3P0DP91 AC108676.2-201ENST00000605225 163 ntBASIC0.73□□□□□ -2.29
CSB-PGBD3P0DP91 RNU6-127P-201ENST00000390897 107 ntBASIC0.72□□□□□ -2.29
CSB-PGBD3P0DP91 MIR1197-201ENST00000408818 88 ntBASIC0.72□□□□□ -2.29
CSB-PGBD3P0DP91 MIRLET7D-201ENST00000362263 87 ntBASIC0.71□□□□□ -2.3
CSB-PGBD3P0DP91 MIR4464-201ENST00000580818 92 ntBASIC0.71□□□□□ -2.3
CSB-PGBD3P0DP91 uc_338.17-201ENST00000619633 179 ntBASIC0.71□□□□□ -2.3
CSB-PGBD3P0DP91 RNA5SP98-201ENST00000363158 137 ntBASIC0.7□□□□□ -2.3
CSB-PGBD3P0DP91 RNU6-930P-201ENST00000390938 100 ntBASIC0.7□□□□□ -2.3
CSB-PGBD3P0DP91 uc_338.36-201ENST00000622331 158 ntBASIC0.7□□□□□ -2.3
CSB-PGBD3P0DP91 RNU6-815P-201ENST00000384080 113 ntBASIC0.69□□□□□ -2.3
CSB-PGBD3P0DP91 RNU6-1262P-201ENST00000516217 96 ntBASIC0.69□□□□□ -2.3
CSB-PGBD3P0DP91 RNU6-419P-201ENST00000517030 63 ntBASIC0.69□□□□□ -2.3
CSB-PGBD3P0DP91 MIR6888-201ENST00000621977 67 ntBASIC0.69□□□□□ -2.3
CSB-PGBD3P0DP91 snoR1.1-201ENST00000628177 80 ntBASIC0.69□□□□□ -2.3
CSB-PGBD3P0DP91 RNU6-924P-201ENST00000362926 108 ntBASIC0.68□□□□□ -2.3
CSB-PGBD3P0DP91 MIR92A1-201ENST00000385233 78 ntBASIC0.68□□□□□ -2.3
CSB-PGBD3P0DP91 AC114737.2-201ENST00000421583 173 ntBASIC0.68□□□□□ -2.3
CSB-PGBD3P0DP91 AC108740.1-201ENST00000498629 225 ntBASIC0.68□□□□□ -2.3
CSB-PGBD3P0DP91 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
CSB-PGBD3P0DP91 MIR548F3-201ENST00000408509 87 ntBASIC0.67□□□□□ -2.3
CSB-PGBD3P0DP91 Y_RNA.69-201ENST00000362885 109 ntBASIC0.66□□□□□ -2.3
CSB-PGBD3P0DP91 RNA5SP257-201ENST00000363023 116 ntBASIC0.66□□□□□ -2.3
CSB-PGBD3P0DP91 MIR643-201ENST00000385267 97 ntBASIC0.66□□□□□ -2.3
CSB-PGBD3P0DP91 U7.5-201ENST00000517224 61 ntBASIC0.66□□□□□ -2.3
CSB-PGBD3P0DP91 RNU7-88P-201ENST00000458752 63 ntBASIC0.65□□□□□ -2.31
CSB-PGBD3P0DP91 RNU7-55P-201ENST00000459426 62 ntBASIC0.65□□□□□ -2.31
CSB-PGBD3P0DP91 AL445584.3-201ENST00000617173 78 ntBASIC0.65□□□□□ -2.31
CSB-PGBD3P0DP91 AL391099.1-201ENST00000624635 187 ntBASIC0.65□□□□□ -2.31
CSB-PGBD3P0DP91 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.64□□□□□ -2.31
CSB-PGBD3P0DP91 RNU6-696P-201ENST00000390834 107 ntBASIC0.64□□□□□ -2.31
CSB-PGBD3P0DP91 RNU6-1206P-201ENST00000516339 103 ntBASIC0.64□□□□□ -2.31
CSB-PGBD3P0DP91 RNU6-1267P-201ENST00000410747 107 ntBASIC0.63□□□□□ -2.31
CSB-PGBD3P0DP91 RNU7-160P-201ENST00000516660 62 ntBASIC0.63□□□□□ -2.31
CSB-PGBD3P0DP91 MIR6514-201ENST00000622549 70 ntBASIC0.63□□□□□ -2.31
CSB-PGBD3P0DP91 VTRNA1-3-201ENST00000365645 89 ntBASIC0.62□□□□□ -2.31
CSB-PGBD3P0DP91 MIR548H2-201ENST00000408874 88 ntBASIC0.62□□□□□ -2.31
CSB-PGBD3P0DP91 Y_RNA.68-201ENST00000362881 102 ntBASIC0.61□□□□□ -2.31
CSB-PGBD3P0DP91 MIR548AA1-201ENST00000384971 97 ntBASIC0.61□□□□□ -2.31
CSB-PGBD3P0DP91 RNA5SP62-201ENST00000363457 110 ntBASIC0.6□□□□□ -2.31
CSB-PGBD3P0DP91 RNU6-973P-201ENST00000364690 107 ntBASIC0.6□□□□□ -2.31
CSB-PGBD3P0DP91 RNU6-1133P-201ENST00000410963 100 ntBASIC0.6□□□□□ -2.31
CSB-PGBD3P0DP91 RNU6-1174P-201ENST00000517278 101 ntBASIC0.6□□□□□ -2.31
CSB-PGBD3P0DP91 AC090625.1-201ENST00000357130 210 ntBASIC0.59□□□□□ -2.31
CSB-PGBD3P0DP91 Y_RNA.178-201ENST00000363832 102 ntBASIC0.59□□□□□ -2.31
CSB-PGBD3P0DP91 MIR125B1-201ENST00000385236 88 ntBASIC0.59□□□□□ -2.31
CSB-PGBD3P0DP91 SNORD57-201ENST00000448188 72 ntBASIC0.59□□□□□ -2.31
CSB-PGBD3P0DP91 MIR4514-201ENST00000581410 57 ntBASIC0.59□□□□□ -2.31
CSB-PGBD3P0DP91 RNU6-838P-201ENST00000363399 108 ntBASIC0.58□□□□□ -2.32
CSB-PGBD3P0DP91 AC096531.1-201ENST00000419107 107 ntBASIC0.58□□□□□ -2.32
CSB-PGBD3P0DP91 AC069113.3-201ENST00000521019 150 ntBASIC0.58□□□□□ -2.32
CSB-PGBD3P0DP91 MIR5704-201ENST00000584029 77 ntBASIC0.58□□□□□ -2.32
CSB-PGBD3P0DP91 MIR6507-201ENST00000613630 70 ntBASIC0.58□□□□□ -2.32
CSB-PGBD3P0DP91 RNU6-900P-201ENST00000384498 102 ntBASIC0.57□□□□□ -2.32
CSB-PGBD3P0DP91 RNU6-455P-201ENST00000384681 107 ntBASIC0.57□□□□□ -2.32
CSB-PGBD3P0DP91 MIR329-2-201ENST00000385029 84 ntBASIC0.57□□□□□ -2.32
CSB-PGBD3P0DP91 RNU6-995P-201ENST00000391244 107 ntBASIC0.57□□□□□ -2.32
CSB-PGBD3P0DP91 RNA5SP163-201ENST00000410304 99 ntBASIC0.57□□□□□ -2.32
CSB-PGBD3P0DP91 MIR2909-201ENST00000617113 69 ntBASIC0.57□□□□□ -2.32
CSB-PGBD3P0DP91 MIR8068-201ENST00000618032 68 ntBASIC0.57□□□□□ -2.32
CSB-PGBD3P0DP91 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC0.56□□□□□ -2.32
CSB-PGBD3P0DP91 SNORA62.4-201ENST00000365504 151 ntBASIC0.56□□□□□ -2.32
CSB-PGBD3P0DP91 RNU6-1327P-201ENST00000365302 105 ntBASIC0.54□□□□□ -2.32
CSB-PGBD3P0DP91 RNU6-974P-201ENST00000384099 108 ntBASIC0.54□□□□□ -2.32
CSB-PGBD3P0DP91 MIR545-201ENST00000385085 106 ntBASIC0.54□□□□□ -2.32
CSB-PGBD3P0DP91 SNORA62.5-201ENST00000516634 120 ntBASIC0.54□□□□□ -2.32
CSB-PGBD3P0DP91 RNU6-180P-201ENST00000516697 61 ntBASIC0.54□□□□□ -2.32
CSB-PGBD3P0DP91 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.54□□□□□ -2.32
CSB-PGBD3P0DP91 CR383656.4-201ENST00000546909 122 ntBASIC0.54□□□□□ -2.32
CSB-PGBD3P0DP91 Y_RNA.139-201ENST00000363464 102 ntBASIC0.53□□□□□ -2.32
CSB-PGBD3P0DP91 RNU6-828P-201ENST00000364876 107 ntBASIC0.53□□□□□ -2.32
CSB-PGBD3P0DP91 SNORD63.1-201ENST00000516178 80 ntBASIC0.52□□□□□ -2.33
CSB-PGBD3P0DP91 RNU6-247P-201ENST00000362636 107 ntBASIC0.51□□□□□ -2.33
CSB-PGBD3P0DP91 SNORA50A-201ENST00000384225 134 ntBASIC0.51□□□□□ -2.33
CSB-PGBD3P0DP91 AL451105.1-201ENST00000450005 189 ntBASIC0.5□□□□□ -2.33
CSB-PGBD3P0DP91 MTRNR2L9-201ENST00000622562 75 ntBASIC0.5□□□□□ -2.33
CSB-PGBD3P0DP91 MIR148A-201ENST00000362215 68 ntBASIC0.49□□□□□ -2.33
CSB-PGBD3P0DP91 SNORD56B-201ENST00000384713 71 ntBASIC0.49□□□□□ -2.33
CSB-PGBD3P0DP91 Y_RNA.613-201ENST00000410726 97 ntBASIC0.49□□□□□ -2.33
CSB-PGBD3P0DP91 MIR593-201ENST00000384856 100 ntBASIC0.47□□□□□ -2.33
CSB-PGBD3P0DP91 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.47□□□□□ -2.33
CSB-PGBD3P0DP91 AC244250.2-201ENST00000418731 148 ntBASIC0.46□□□□□ -2.34
CSB-PGBD3P0DP91 RNA5SP134-201ENST00000516492 96 ntBASIC0.46□□□□□ -2.34
CSB-PGBD3P0DP91 MIR3170-201ENST00000582699 77 ntBASIC0.46□□□□□ -2.34
Retrieved 100 of 98,524 protein–RNA pairs in 419.2 ms