Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 Y_RNA.73-201ENST00000362910 113 ntBASIC-1.1□□□□□ -2.59
SNX3O60493 Y_RNA.219-201ENST00000364232 113 ntBASIC-1.1□□□□□ -2.59
SNX3O60493 Y_RNA.433-201ENST00000384089 102 ntBASIC-1.1□□□□□ -2.59
SNX3O60493 Y_RNA.607-201ENST00000410597 98 ntBASIC-1.1□□□□□ -2.59
SNX3O60493 RNA5SP395-201ENST00000516567 118 ntBASIC-1.1□□□□□ -2.59
SNX3O60493 MIR378F-201ENST00000578143 78 ntBASIC-1.1□□□□□ -2.59
SNX3O60493 MIR4324-201ENST00000584846 72 ntBASIC-1.1□□□□□ -2.59
SNX3O60493 RNY1P1-201ENST00000364372 112 ntBASIC-1.11□□□□□ -2.59
SNX3O60493 RNU6-431P-201ENST00000383874 107 ntBASIC-1.11□□□□□ -2.59
SNX3O60493 RNU6-604P-201ENST00000390917 100 ntBASIC-1.11□□□□□ -2.59
SNX3O60493 RNU6-1236P-201ENST00000517080 99 ntBASIC-1.11□□□□□ -2.59
SNX3O60493 MIR4484-201ENST00000582855 83 ntBASIC-1.11□□□□□ -2.59
SNX3O60493 RNU6-30P-201ENST00000384561 107 ntBASIC-1.12□□□□□ -2.59
SNX3O60493 MIR548C-201ENST00000384815 97 ntBASIC-1.12□□□□□ -2.59
SNX3O60493 MIR147A-201ENST00000385079 72 ntBASIC-1.12□□□□□ -2.59
SNX3O60493 RNY4P30-201ENST00000410216 95 ntBASIC-1.12□□□□□ -2.59
SNX3O60493 SNORD45.1-201ENST00000363181 77 ntBASIC-1.13□□□□□ -2.59
SNX3O60493 RNU6-153P-201ENST00000364422 104 ntBASIC-1.13□□□□□ -2.59
SNX3O60493 Y_RNA.426-201ENST00000384068 113 ntBASIC-1.13□□□□□ -2.59
SNX3O60493 SNORD64-201ENST00000386683 67 ntBASIC-1.13□□□□□ -2.59
SNX3O60493 RNU6-807P-201ENST00000516805 107 ntBASIC-1.13□□□□□ -2.59
SNX3O60493 MIR1297-201ENST00000637311 77 ntBASIC-1.13□□□□□ -2.59
SNX3O60493 RNU6-380P-201ENST00000410207 107 ntBASIC-1.14□□□□□ -2.59
SNX3O60493 MIR548AG1-201ENST00000579932 66 ntBASIC-1.14□□□□□ -2.59
SNX3O60493 MIR5588-201ENST00000581890 63 ntBASIC-1.14□□□□□ -2.59
SNX3O60493 MIR6738-201ENST00000619620 64 ntBASIC-1.14□□□□□ -2.59
SNX3O60493 RNU6-982P-201ENST00000516216 102 ntBASIC-1.15□□□□□ -2.59
SNX3O60493 RNU6-979P-201ENST00000383896 107 ntBASIC-1.16□□□□□ -2.6
SNX3O60493 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.17□□□□□ -2.6
SNX3O60493 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.17□□□□□ -2.6
SNX3O60493 SCARNA18B-201ENST00000458806 135 ntBASIC-1.17□□□□□ -2.6
SNX3O60493 snoU13.19-201ENST00000459148 104 ntBASIC-1.17□□□□□ -2.6
SNX3O60493 RNU6-315P-201ENST00000362666 107 ntBASIC-1.18□□□□□ -2.6
SNX3O60493 Y_RNA.316-201ENST00000365118 111 ntBASIC-1.18□□□□□ -2.6
SNX3O60493 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.18□□□□□ -2.6
SNX3O60493 RNU6-24P-201ENST00000384440 107 ntBASIC-1.2□□□□□ -2.6
SNX3O60493 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-1.2□□□□□ -2.6
SNX3O60493 SNORA26.4-201ENST00000391188 123 ntBASIC-1.2□□□□□ -2.6
SNX3O60493 RNU7-174P-201ENST00000516248 59 ntBASIC-1.2□□□□□ -2.6
SNX3O60493 RNU6-1089P-201ENST00000516473 104 ntBASIC-1.2□□□□□ -2.6
SNX3O60493 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.21□□□□□ -2.6
SNX3O60493 MIR382-201ENST00000637119 76 ntBASIC-1.21□□□□□ -2.6
SNX3O60493 SNORD115-33-201ENST00000363723 82 ntBASIC-1.22□□□□□ -2.6
SNX3O60493 RNU6-10P-201ENST00000384036 107 ntBASIC-1.22□□□□□ -2.6
SNX3O60493 RNU6-246P-201ENST00000384702 107 ntBASIC-1.22□□□□□ -2.6
SNX3O60493 RNU7-171P-201ENST00000459581 62 ntBASIC-1.22□□□□□ -2.6
SNX3O60493 SNORD63.1-201ENST00000516178 80 ntBASIC-1.22□□□□□ -2.6
SNX3O60493 SNORD115-22-201ENST00000364456 82 ntBASIC-1.23□□□□□ -2.61
SNX3O60493 Y_RNA.694-201ENST00000516677 117 ntBASIC-1.23□□□□□ -2.61
SNX3O60493 RNU7-88P-201ENST00000458752 63 ntBASIC-1.24□□□□□ -2.61
SNX3O60493 MIR3115-201ENST00000577915 68 ntBASIC-1.24□□□□□ -2.61
SNX3O60493 MIR664A-201ENST00000626086 82 ntBASIC-1.24□□□□□ -2.61
SNX3O60493 hsa-mir-4536-1.1-201ENST00000636519 88 ntBASIC-1.24□□□□□ -2.61
SNX3O60493 MIR494-201ENST00000349529 81 ntBASIC-1.25□□□□□ -2.61
SNX3O60493 RNU6-1094P-201ENST00000362416 104 ntBASIC-1.25□□□□□ -2.61
SNX3O60493 RNA5SP67-201ENST00000516422 131 ntBASIC-1.25□□□□□ -2.61
SNX3O60493 snoU83B.1-201ENST00000517136 88 ntBASIC-1.25□□□□□ -2.61
SNX3O60493 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.25□□□□□ -2.61
SNX3O60493 U7.5-201ENST00000517224 61 ntBASIC-1.25□□□□□ -2.61
SNX3O60493 MIR4306-201ENST00000583390 91 ntBASIC-1.25□□□□□ -2.61
SNX3O60493 MIR8053-201ENST00000613344 75 ntBASIC-1.25□□□□□ -2.61
SNX3O60493 MIR587-201ENST00000384845 96 ntBASIC-1.26□□□□□ -2.61
SNX3O60493 RNA5SP192-201ENST00000364404 120 ntBASIC-1.27□□□□□ -2.61
SNX3O60493 RNU6-294P-201ENST00000364999 102 ntBASIC-1.27□□□□□ -2.61
SNX3O60493 Y_RNA.313-201ENST00000365095 103 ntBASIC-1.27□□□□□ -2.61
SNX3O60493 MTND4LP1-201ENST00000446263 157 ntBASIC-1.27□□□□□ -2.61
SNX3O60493 RNU6-732P-201ENST00000516033 103 ntBASIC-1.27□□□□□ -2.61
SNX3O60493 Y_RNA.74-201ENST00000362911 99 ntBASIC-1.28□□□□□ -2.61
SNX3O60493 Y_RNA.81-201ENST00000362997 102 ntBASIC-1.28□□□□□ -2.61
SNX3O60493 SNORD113.1-201ENST00000363280 73 ntBASIC-1.28□□□□□ -2.61
SNX3O60493 MIR450A2-201ENST00000385022 100 ntBASIC-1.28□□□□□ -2.61
SNX3O60493 MIR4712-201ENST00000583750 82 ntBASIC-1.28□□□□□ -2.61
SNX3O60493 MIR1245B-201ENST00000636115 69 ntBASIC-1.28□□□□□ -2.61
SNX3O60493 Y_RNA.325-201ENST00000365171 122 ntBASIC-1.29□□□□□ -2.62
SNX3O60493 SNORD45A-201ENST00000384512 84 ntBASIC-1.29□□□□□ -2.62
SNX3O60493 RNU6ATAC17P-201ENST00000516074 71 ntBASIC-1.29□□□□□ -2.62
SNX3O60493 RNU6-698P-201ENST00000363523 107 ntBASIC-1.3□□□□□ -2.62
SNX3O60493 RNU6-34P-201ENST00000364874 107 ntBASIC-1.3□□□□□ -2.62
SNX3O60493 RNU6-242P-201ENST00000384359 107 ntBASIC-1.3□□□□□ -2.62
SNX3O60493 RNU6-587P-201ENST00000391282 106 ntBASIC-1.3□□□□□ -2.62
SNX3O60493 AL353691.2-201ENST00000443795 59 ntBASIC-1.3□□□□□ -2.62
SNX3O60493 RNU6-668P-201ENST00000364180 107 ntBASIC-1.31□□□□□ -2.62
SNX3O60493 Y_RNA.236-201ENST00000364427 111 ntBASIC-1.31□□□□□ -2.62
SNX3O60493 RNU6-1276P-201ENST00000365372 104 ntBASIC-1.31□□□□□ -2.62
SNX3O60493 RNU6-458P-201ENST00000384179 107 ntBASIC-1.31□□□□□ -2.62
SNX3O60493 MIR5582-201ENST00000579697 68 ntBASIC-1.31□□□□□ -2.62
SNX3O60493 MIR3165-201ENST00000579874 75 ntBASIC-1.31□□□□□ -2.62
SNX3O60493 U6.58-201ENST00000613107 107 ntBASIC-1.31□□□□□ -2.62
SNX3O60493 U4.4-201ENST00000620626 117 ntBASIC-1.31□□□□□ -2.62
SNX3O60493 MIR527-201ENST00000385244 85 ntBASIC-1.32□□□□□ -2.62
SNX3O60493 RNA5SP476-201ENST00000516613 103 ntBASIC-1.32□□□□□ -2.62
SNX3O60493 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.32□□□□□ -2.62
SNX3O60493 RNY1P9-201ENST00000532431 109 ntBASIC-1.32□□□□□ -2.62
SNX3O60493 MIR548V-201ENST00000584165 80 ntBASIC-1.32□□□□□ -2.62
SNX3O60493 Y_RNA.178-201ENST00000363832 102 ntBASIC-1.33□□□□□ -2.62
SNX3O60493 Y_RNA.282-201ENST00000364793 102 ntBASIC-1.33□□□□□ -2.62
SNX3O60493 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.34□□□□□ -2.62
SNX3O60493 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.34□□□□□ -2.62
SNX3O60493 SNORD19-201ENST00000391191 68 ntBASIC-1.34□□□□□ -2.62
SNX3O60493 Y_RNA.94-201ENST00000363068 106 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 200.8 ms