Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 MIR501-201ENST00000390204 84 ntBASIC0.81□□□□□ -2.28
GRIN3BO60391 RNA5SP63-201ENST00000391225 112 ntBASIC0.81□□□□□ -2.28
GRIN3BO60391 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.81□□□□□ -2.28
GRIN3BO60391 RNU6-848P-201ENST00000515948 107 ntBASIC0.81□□□□□ -2.28
GRIN3BO60391 RNU6-617P-201ENST00000516147 107 ntBASIC0.81□□□□□ -2.28
GRIN3BO60391 RNU6-473P-201ENST00000516164 107 ntBASIC0.81□□□□□ -2.28
GRIN3BO60391 RNU6-1049P-201ENST00000516414 107 ntBASIC0.81□□□□□ -2.28
GRIN3BO60391 RNU6-782P-201ENST00000516852 104 ntBASIC0.81□□□□□ -2.28
GRIN3BO60391 RNU6-974P-201ENST00000384099 108 ntBASIC0.8□□□□□ -2.28
GRIN3BO60391 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
GRIN3BO60391 RNU6-724P-201ENST00000390958 105 ntBASIC0.8□□□□□ -2.28
GRIN3BO60391 MIR4677-201ENST00000584153 80 ntBASIC0.8□□□□□ -2.28
GRIN3BO60391 RN7SL660P-201ENST00000614852 299 ntBASIC0.8□□□□□ -2.28
GRIN3BO60391 RNU4-54P-201ENST00000516428 129 ntBASIC0.79□□□□□ -2.28
GRIN3BO60391 MIR548AL-201ENST00000578416 97 ntBASIC0.79□□□□□ -2.28
GRIN3BO60391 MIR4464-201ENST00000580818 92 ntBASIC0.79□□□□□ -2.28
GRIN3BO60391 MTRNR2L9-201ENST00000622562 75 ntBASIC0.79□□□□□ -2.28
GRIN3BO60391 RNU6-1036P-201ENST00000383959 104 ntBASIC0.78□□□□□ -2.28
GRIN3BO60391 RNU7-160P-201ENST00000516660 62 ntBASIC0.78□□□□□ -2.28
GRIN3BO60391 AL353803.5-201ENST00000599815 141 ntBASIC0.78□□□□□ -2.28
GRIN3BO60391 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.78□□□□□ -2.29
GRIN3BO60391 SNORD114-29-201ENST00000364819 70 ntBASIC0.77□□□□□ -2.29
GRIN3BO60391 RNU6-863P-201ENST00000515989 104 ntBASIC0.77□□□□□ -2.29
GRIN3BO60391 RNU6-1262P-201ENST00000516217 96 ntBASIC0.77□□□□□ -2.29
GRIN3BO60391 RNA5SP470-201ENST00000516463 106 ntBASIC0.77□□□□□ -2.29
GRIN3BO60391 RNU6-229P-201ENST00000516614 102 ntBASIC0.77□□□□□ -2.29
GRIN3BO60391 MIR3925-201ENST00000584674 77 ntBASIC0.77□□□□□ -2.29
GRIN3BO60391 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.77□□□□□ -2.29
GRIN3BO60391 RNA5SP499-201ENST00000363982 119 ntBASIC0.76□□□□□ -2.29
GRIN3BO60391 MIR548H4-201ENST00000408689 111 ntBASIC0.76□□□□□ -2.29
GRIN3BO60391 RNU6-1267P-201ENST00000410747 107 ntBASIC0.76□□□□□ -2.29
GRIN3BO60391 AL451105.1-201ENST00000450005 189 ntBASIC0.75□□□□□ -2.29
GRIN3BO60391 Y_RNA.139-201ENST00000363464 102 ntBASIC0.74□□□□□ -2.29
GRIN3BO60391 RNU6-945P-201ENST00000383947 107 ntBASIC0.74□□□□□ -2.29
GRIN3BO60391 Y_RNA.423-201ENST00000384057 113 ntBASIC0.74□□□□□ -2.29
GRIN3BO60391 MIR4514-201ENST00000581410 57 ntBASIC0.74□□□□□ -2.29
GRIN3BO60391 U7.6-201ENST00000610841 64 ntBASIC0.74□□□□□ -2.29
GRIN3BO60391 MIR6888-201ENST00000621977 67 ntBASIC0.74□□□□□ -2.29
GRIN3BO60391 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.74□□□□□ -2.29
GRIN3BO60391 SNORA2A-201ENST00000383885 135 ntBASIC0.73□□□□□ -2.29
GRIN3BO60391 MIR6759-201ENST00000638110 65 ntBASIC0.73□□□□□ -2.29
GRIN3BO60391 MIR29B1-201ENST00000385015 81 ntBASIC0.72□□□□□ -2.29
GRIN3BO60391 MIR329-2-201ENST00000385029 84 ntBASIC0.72□□□□□ -2.29
GRIN3BO60391 MIR876-201ENST00000401147 81 ntBASIC0.72□□□□□ -2.29
GRIN3BO60391 SNORD57-201ENST00000448188 72 ntBASIC0.72□□□□□ -2.29
GRIN3BO60391 SNORD2-201ENST00000459163 69 ntBASIC0.72□□□□□ -2.29
GRIN3BO60391 RNU6ATAC14P-201ENST00000516218 91 ntBASIC0.72□□□□□ -2.29
GRIN3BO60391 MIR4432-201ENST00000581823 84 ntBASIC0.72□□□□□ -2.29
GRIN3BO60391 AC023932.2-201ENST00000603176 175 ntBASIC0.72□□□□□ -2.29
GRIN3BO60391 RNU6-696P-201ENST00000390834 107 ntBASIC0.71□□□□□ -2.3
GRIN3BO60391 U7.5-201ENST00000517224 61 ntBASIC0.71□□□□□ -2.3
GRIN3BO60391 AC108676.2-201ENST00000605225 163 ntBASIC0.71□□□□□ -2.3
GRIN3BO60391 MIR429-201ENST00000362106 83 ntBASIC0.7□□□□□ -2.3
GRIN3BO60391 RNU6-742P-201ENST00000365289 107 ntBASIC0.7□□□□□ -2.3
GRIN3BO60391 RNU6-1008P-201ENST00000384160 104 ntBASIC0.7□□□□□ -2.3
GRIN3BO60391 C18orf54-201ENST00000300091 5237 ntAPPRIS P1 TSL 1 (best) BASIC0.7□□□□□ -2.3
GRIN3BO60391 RNU6-828P-201ENST00000364876 107 ntBASIC0.69□□□□□ -2.3
GRIN3BO60391 MIR548AA1-201ENST00000384971 97 ntBASIC0.69□□□□□ -2.3
GRIN3BO60391 RNU7-88P-201ENST00000458752 63 ntBASIC0.69□□□□□ -2.3
GRIN3BO60391 RNU6-1174P-201ENST00000517278 101 ntBASIC0.69□□□□□ -2.3
GRIN3BO60391 MIR4636-201ENST00000582271 80 ntBASIC0.69□□□□□ -2.3
GRIN3BO60391 AL445584.3-201ENST00000617173 78 ntBASIC0.69□□□□□ -2.3
GRIN3BO60391 RNU6-258P-201ENST00000390884 101 ntBASIC0.68□□□□□ -2.3
GRIN3BO60391 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
GRIN3BO60391 RNU6-59P-201ENST00000384787 107 ntBASIC0.67□□□□□ -2.3
GRIN3BO60391 MIR106A-201ENST00000384870 81 ntBASIC0.67□□□□□ -2.3
GRIN3BO60391 MIR760-201ENST00000390220 80 ntBASIC0.67□□□□□ -2.3
GRIN3BO60391 AP000676.1-201ENST00000533307 52 ntBASIC0.67□□□□□ -2.3
GRIN3BO60391 AC084368.1-201ENST00000620935 65 ntBASIC0.67□□□□□ -2.3
GRIN3BO60391 MIR499B-201ENST00000636498 73 ntBASIC0.67□□□□□ -2.3
GRIN3BO60391 SNORD44.1-201ENST00000363202 61 ntBASIC0.66□□□□□ -2.3
GRIN3BO60391 AC114737.2-201ENST00000421583 173 ntBASIC0.66□□□□□ -2.3
GRIN3BO60391 snoU13.19-201ENST00000459148 104 ntBASIC0.65□□□□□ -2.31
GRIN3BO60391 MIR3170-201ENST00000582699 77 ntBASIC0.65□□□□□ -2.31
GRIN3BO60391 RNA5SP128-201ENST00000365305 116 ntBASIC0.64□□□□□ -2.31
GRIN3BO60391 MIR520D-201ENST00000385002 87 ntBASIC0.64□□□□□ -2.31
GRIN3BO60391 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.64□□□□□ -2.31
GRIN3BO60391 RNU6-1204P-201ENST00000363948 107 ntBASIC0.63□□□□□ -2.31
GRIN3BO60391 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.63□□□□□ -2.31
GRIN3BO60391 RNU7-55P-201ENST00000459426 62 ntBASIC0.63□□□□□ -2.31
GRIN3BO60391 MIR8068-201ENST00000618032 68 ntBASIC0.63□□□□□ -2.31
GRIN3BO60391 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.62□□□□□ -2.31
GRIN3BO60391 RNU6-822P-201ENST00000362707 106 ntBASIC0.62□□□□□ -2.31
GRIN3BO60391 SNORA50A-201ENST00000384225 134 ntBASIC0.62□□□□□ -2.31
GRIN3BO60391 RNU6-995P-201ENST00000391244 107 ntBASIC0.62□□□□□ -2.31
GRIN3BO60391 SNORA68.3-201ENST00000515906 83 ntBASIC0.62□□□□□ -2.31
GRIN3BO60391 SNORD63.2-201ENST00000516303 64 ntBASIC0.62□□□□□ -2.31
GRIN3BO60391 RNU6-721P-201ENST00000410155 105 ntBASIC0.61□□□□□ -2.31
GRIN3BO60391 SCARNA11.2-201ENST00000517183 154 ntBASIC0.61□□□□□ -2.31
GRIN3BO60391 MIR5589-201ENST00000579442 60 ntBASIC0.61□□□□□ -2.31
GRIN3BO60391 AC138207.3-201ENST00000585289 166 ntBASIC0.61□□□□□ -2.31
GRIN3BO60391 uc_338.36-201ENST00000622331 158 ntBASIC0.61□□□□□ -2.31
GRIN3BO60391 MIRLET7D-201ENST00000362263 87 ntBASIC0.6□□□□□ -2.31
GRIN3BO60391 SNORD63.1-201ENST00000516178 80 ntBASIC0.6□□□□□ -2.31
GRIN3BO60391 U6.103-201ENST00000637085 61 ntBASIC0.6□□□□□ -2.31
GRIN3BO60391 SNORD19-201ENST00000391191 68 ntBASIC0.59□□□□□ -2.31
GRIN3BO60391 MIR548H2-201ENST00000408874 88 ntBASIC0.59□□□□□ -2.31
GRIN3BO60391 MIR5704-201ENST00000584029 77 ntBASIC0.59□□□□□ -2.31
GRIN3BO60391 CCDC7-215ENST00000639629 4158 ntAPPRIS ALT2 TSL 5 BASIC0.59□□□□□ -2.32
GRIN3BO60391 MIR92A1-201ENST00000385233 78 ntBASIC0.58□□□□□ -2.32
Retrieved 100 of 98,524 protein–RNA pairs in 171.3 ms