Protein–RNA interactions for Protein: A6NHR9

SMCHD1, Structural maintenance of chromosomes flexible hinge domain-containing protein 1, humanhuman

Predictions only

Length 2,005 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1A6NHR9 SNORD45A-201ENST00000384512 84 ntBASIC-0.39□□□□□ -2.47
SMCHD1A6NHR9 SNORD114-14-201ENST00000362723 75 ntBASIC-0.4□□□□□ -2.47
SMCHD1A6NHR9 FAS-AS1.1-201ENST00000615327 126 ntBASIC-0.4□□□□□ -2.47
SMCHD1A6NHR9 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.4□□□□□ -2.47
SMCHD1A6NHR9 snoU13.19-201ENST00000459148 104 ntBASIC-0.4□□□□□ -2.47
SMCHD1A6NHR9 U7.4-201ENST00000614961 63 ntBASIC-0.4□□□□□ -2.47
SMCHD1A6NHR9 RNU6-698P-201ENST00000363523 107 ntBASIC-0.41□□□□□ -2.47
SMCHD1A6NHR9 RNU6-34P-201ENST00000364874 107 ntBASIC-0.41□□□□□ -2.47
SMCHD1A6NHR9 SNORD126-201ENST00000459475 77 ntBASIC-0.41□□□□□ -2.47
SMCHD1A6NHR9 RNU6-857P-201ENST00000515893 110 ntBASIC-0.41□□□□□ -2.47
SMCHD1A6NHR9 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.41□□□□□ -2.47
SMCHD1A6NHR9 RNA5SP66-201ENST00000517178 101 ntBASIC-0.41□□□□□ -2.47
SMCHD1A6NHR9 SNORD45.1-201ENST00000363181 77 ntBASIC-0.42□□□□□ -2.48
SMCHD1A6NHR9 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.42□□□□□ -2.48
SMCHD1A6NHR9 MIR630-201ENST00000384957 97 ntBASIC-0.42□□□□□ -2.48
SMCHD1A6NHR9 AL445584.3-201ENST00000617173 78 ntBASIC-0.42□□□□□ -2.48
SMCHD1A6NHR9 U6.96-201ENST00000636425 70 ntBASIC-0.42□□□□□ -2.48
SMCHD1A6NHR9 SNORD114-28-201ENST00000363610 72 ntBASIC-0.43□□□□□ -2.48
SMCHD1A6NHR9 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.43□□□□□ -2.48
SMCHD1A6NHR9 Y_RNA.316-201ENST00000365118 111 ntBASIC-0.43□□□□□ -2.48
SMCHD1A6NHR9 SNORD78.1-201ENST00000390866 65 ntBASIC-0.43□□□□□ -2.48
SMCHD1A6NHR9 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.43□□□□□ -2.48
SMCHD1A6NHR9 RNU6-973P-201ENST00000364690 107 ntBASIC-0.44□□□□□ -2.48
SMCHD1A6NHR9 AL021921.1-201ENST00000442774 93 ntBASIC-0.44□□□□□ -2.48
SMCHD1A6NHR9 RNU6-320P-201ENST00000516511 106 ntBASIC-0.44□□□□□ -2.48
SMCHD1A6NHR9 U7.5-201ENST00000517224 61 ntBASIC-0.45□□□□□ -2.48
SMCHD1A6NHR9 RNA5SP275-201ENST00000363936 118 ntBASIC-0.45□□□□□ -2.48
SMCHD1A6NHR9 RNU6-330P-201ENST00000363015 107 ntBASIC-0.46□□□□□ -2.48
SMCHD1A6NHR9 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.46□□□□□ -2.48
SMCHD1A6NHR9 MIR3179-1-201ENST00000578940 84 ntBASIC-0.46□□□□□ -2.48
SMCHD1A6NHR9 MIR3179-2-201ENST00000579107 84 ntBASIC-0.46□□□□□ -2.48
SMCHD1A6NHR9 MIR3179-3-201ENST00000579566 84 ntBASIC-0.46□□□□□ -2.48
SMCHD1A6NHR9 MIR3179-4-201ENST00000617599 84 ntBASIC-0.46□□□□□ -2.48
SMCHD1A6NHR9 SNORA62.4-201ENST00000365504 151 ntBASIC-0.47□□□□□ -2.48
SMCHD1A6NHR9 RNU6-663P-201ENST00000391105 106 ntBASIC-0.47□□□□□ -2.48
SMCHD1A6NHR9 Y_RNA.685-201ENST00000516532 108 ntBASIC-0.47□□□□□ -2.49
SMCHD1A6NHR9 MIR5704-201ENST00000584029 77 ntBASIC-0.47□□□□□ -2.49
SMCHD1A6NHR9 Y_RNA.246-201ENST00000364495 108 ntBASIC-0.48□□□□□ -2.49
SMCHD1A6NHR9 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.48□□□□□ -2.49
SMCHD1A6NHR9 RNU6-573P-201ENST00000383938 106 ntBASIC-0.48□□□□□ -2.49
SMCHD1A6NHR9 MT-TQ-201ENST00000387372 72 ntBASIC-0.48□□□□□ -2.49
SMCHD1A6NHR9 RNA5SP470-201ENST00000516463 106 ntBASIC-0.48□□□□□ -2.49
SMCHD1A6NHR9 MIR4436A-201ENST00000585278 85 ntBASIC-0.48□□□□□ -2.49
SMCHD1A6NHR9 MIR604-201ENST00000384880 94 ntBASIC-0.48□□□□□ -2.49
SMCHD1A6NHR9 MIR196A2-201ENST00000385189 110 ntBASIC-0.48□□□□□ -2.49
SMCHD1A6NHR9 RNU6-645P-201ENST00000364649 106 ntBASIC-0.5□□□□□ -2.49
SMCHD1A6NHR9 U2.7-201ENST00000619197 100 ntBASIC-0.5□□□□□ -2.49
SMCHD1A6NHR9 RNU6-940P-201ENST00000363433 104 ntBASIC-0.5□□□□□ -2.49
SMCHD1A6NHR9 SNORD38.3-201ENST00000516599 73 ntBASIC-0.5□□□□□ -2.49
SMCHD1A6NHR9 RNU6-242P-201ENST00000384359 107 ntBASIC-0.51□□□□□ -2.49
SMCHD1A6NHR9 MIR518B-201ENST00000385127 83 ntBASIC-0.51□□□□□ -2.49
SMCHD1A6NHR9 SNORA72.7-201ENST00000516349 94 ntBASIC-0.51□□□□□ -2.49
SMCHD1A6NHR9 SNORA25.5-201ENST00000363782 126 ntBASIC-0.52□□□□□ -2.49
SMCHD1A6NHR9 SNORD74.6-201ENST00000364796 70 ntBASIC-0.52□□□□□ -2.49
SMCHD1A6NHR9 AP000533.3-201ENST00000447704 118 ntBASIC-0.52□□□□□ -2.49
SMCHD1A6NHR9 RNU7-88P-201ENST00000458752 63 ntBASIC-0.52□□□□□ -2.49
SMCHD1A6NHR9 MIR548V-201ENST00000584165 80 ntBASIC-0.52□□□□□ -2.49
SMCHD1A6NHR9 AL353803.5-201ENST00000599815 141 ntBASIC-0.52□□□□□ -2.49
SMCHD1A6NHR9 MIR548AZ-201ENST00000616567 95 ntBASIC-0.52□□□□□ -2.49
SMCHD1A6NHR9 Y_RNA.189-201ENST00000363959 112 ntBASIC-0.53□□□□□ -2.49
SMCHD1A6NHR9 RNA5SP331-201ENST00000364986 107 ntBASIC-0.53□□□□□ -2.49
SMCHD1A6NHR9 RNA5SP225-201ENST00000410874 135 ntBASIC-0.53□□□□□ -2.49
SMCHD1A6NHR9 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-0.53□□□□□ -2.49
SMCHD1A6NHR9 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.54□□□□□ -2.5
SMCHD1A6NHR9 SNORD75.1-201ENST00000408373 60 ntBASIC-0.54□□□□□ -2.5
SMCHD1A6NHR9 RNU6-284P-201ENST00000411105 106 ntBASIC-0.54□□□□□ -2.5
SMCHD1A6NHR9 SNORD63.1-201ENST00000516178 80 ntBASIC-0.54□□□□□ -2.5
SMCHD1A6NHR9 MIR8064-201ENST00000612863 90 ntBASIC-0.54□□□□□ -2.5
SMCHD1A6NHR9 RNU6-924P-201ENST00000362926 108 ntBASIC-0.54□□□□□ -2.5
SMCHD1A6NHR9 SNORD115-31-201ENST00000365318 82 ntBASIC-0.54□□□□□ -2.5
SMCHD1A6NHR9 MIR6888-201ENST00000621977 67 ntBASIC-0.54□□□□□ -2.5
SMCHD1A6NHR9 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.55□□□□□ -2.5
SMCHD1A6NHR9 MIR224-201ENST00000384889 81 ntBASIC-0.55□□□□□ -2.5
SMCHD1A6NHR9 MIR4464-201ENST00000580818 92 ntBASIC-0.55□□□□□ -2.5
SMCHD1A6NHR9 RNU6-1296P-201ENST00000383879 107 ntBASIC-0.57□□□□□ -2.5
SMCHD1A6NHR9 MIR124-2-201ENST00000385081 109 ntBASIC-0.57□□□□□ -2.5
SMCHD1A6NHR9 SNORD113-2-201ENST00000391082 72 ntBASIC-0.57□□□□□ -2.5
SMCHD1A6NHR9 SNORA3B-201ENST00000391305 131 ntBASIC-0.57□□□□□ -2.5
SMCHD1A6NHR9 AC021146.6-201ENST00000514659 117 ntBASIC-0.57□□□□□ -2.5
SMCHD1A6NHR9 RNU6-411P-201ENST00000384451 107 ntBASIC-0.57□□□□□ -2.5
SMCHD1A6NHR9 MIR204-201ENST00000385200 110 ntBASIC-0.57□□□□□ -2.5
SMCHD1A6NHR9 SNORA26.4-201ENST00000391188 123 ntBASIC-0.57□□□□□ -2.5
SMCHD1A6NHR9 RNA5SP451-201ENST00000410588 110 ntBASIC-0.57□□□□□ -2.5
SMCHD1A6NHR9 RNU6-634P-201ENST00000459134 106 ntBASIC-0.57□□□□□ -2.5
SMCHD1A6NHR9 RNU6-721P-201ENST00000410155 105 ntBASIC-0.58□□□□□ -2.5
SMCHD1A6NHR9 RNU6-1262P-201ENST00000516217 96 ntBASIC-0.58□□□□□ -2.5
SMCHD1A6NHR9 MIR548AX-201ENST00000580117 73 ntBASIC-0.58□□□□□ -2.5
SMCHD1A6NHR9 Y_RNA.325-201ENST00000365171 122 ntBASIC-0.59□□□□□ -2.5
SMCHD1A6NHR9 RNU6-604P-201ENST00000390917 100 ntBASIC-0.59□□□□□ -2.5
SMCHD1A6NHR9 Y_RNA.282-201ENST00000364793 102 ntBASIC-0.59□□□□□ -2.5
SMCHD1A6NHR9 MIR4484-201ENST00000582855 83 ntBASIC-0.6□□□□□ -2.51
SMCHD1A6NHR9 AL445193.1-201ENST00000441183 141 ntBASIC-0.6□□□□□ -2.51
SMCHD1A6NHR9 MIR3134-201ENST00000579433 74 ntBASIC-0.6□□□□□ -2.51
SMCHD1A6NHR9 MIR4490-201ENST00000582647 84 ntBASIC-0.6□□□□□ -2.51
SMCHD1A6NHR9 Y_RNA.74-201ENST00000362911 99 ntBASIC-0.62□□□□□ -2.51
SMCHD1A6NHR9 RNU6-246P-201ENST00000384702 107 ntBASIC-0.62□□□□□ -2.51
SMCHD1A6NHR9 RNU6-668P-201ENST00000364180 107 ntBASIC-0.62□□□□□ -2.51
SMCHD1A6NHR9 Y_RNA.244-201ENST00000364484 109 ntBASIC-0.62□□□□□ -2.51
SMCHD1A6NHR9 RNU6-1250P-201ENST00000391218 107 ntBASIC-0.62□□□□□ -2.51
SMCHD1A6NHR9 RNU4-63P-201ENST00000411313 118 ntBASIC-0.62□□□□□ -2.51
Retrieved 100 of 98,524 protein–RNA pairs in 301.2 ms