Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AC113195.1-201ENST00000579952 141 ntBASIC-3.26□□□□□ -2.93
HLA-DRB4X5D2U9 Y_RNA.778-201ENST00000620203 90 ntBASIC-3.26□□□□□ -2.93
HLA-DRB4X5D2U9 AL160413.1-201ENST00000622780 310 ntBASIC-3.26□□□□□ -2.93
HLA-DRB4X5D2U9 RNU6-598P-201ENST00000364017 105 ntBASIC-3.27□□□□□ -2.93
HLA-DRB4X5D2U9 RNU6-1111P-201ENST00000391118 107 ntBASIC-3.27□□□□□ -2.93
HLA-DRB4X5D2U9 Y_RNA.606-201ENST00000410579 103 ntBASIC-3.27□□□□□ -2.93
HLA-DRB4X5D2U9 MIR3658-201ENST00000636291 56 ntBASIC-3.27□□□□□ -2.93
HLA-DRB4X5D2U9 RNU6-987P-201ENST00000384759 104 ntBASIC-3.28□□□□□ -2.93
HLA-DRB4X5D2U9 MIR581-201ENST00000384895 96 ntBASIC-3.28□□□□□ -2.93
HLA-DRB4X5D2U9 MIR509-1-201ENST00000385265 94 ntBASIC-3.28□□□□□ -2.93
HLA-DRB4X5D2U9 MIR548A3-201ENST00000385297 97 ntBASIC-3.28□□□□□ -2.93
HLA-DRB4X5D2U9 MIR509-2-201ENST00000390724 91 ntBASIC-3.28□□□□□ -2.93
HLA-DRB4X5D2U9 RNU6-971P-201ENST00000516920 106 ntBASIC-3.28□□□□□ -2.93
HLA-DRB4X5D2U9 NCRUPAR_2.1-201ENST00000616308 99 ntBASIC-3.28□□□□□ -2.93
HLA-DRB4X5D2U9 RNY3P2-201ENST00000362918 102 ntBASIC-3.29□□□□□ -2.94
HLA-DRB4X5D2U9 RNU6-1215P-201ENST00000384441 102 ntBASIC-3.29□□□□□ -2.94
HLA-DRB4X5D2U9 SNORD45B-201ENST00000364617 72 ntBASIC-3.3□□□□□ -2.94
HLA-DRB4X5D2U9 Y_RNA.277-201ENST00000364754 102 ntBASIC-3.3□□□□□ -2.94
HLA-DRB4X5D2U9 RNU6-828P-201ENST00000364876 107 ntBASIC-3.3□□□□□ -2.94
HLA-DRB4X5D2U9 RNU6-1318P-201ENST00000365389 103 ntBASIC-3.3□□□□□ -2.94
HLA-DRB4X5D2U9 MIR1302-6-201ENST00000408466 90 ntBASIC-3.3□□□□□ -2.94
HLA-DRB4X5D2U9 Y_RNA.699-201ENST00000516803 93 ntBASIC-3.3□□□□□ -2.94
HLA-DRB4X5D2U9 RNA5SP106-201ENST00000517274 100 ntBASIC-3.3□□□□□ -2.94
HLA-DRB4X5D2U9 AL731768.1-201ENST00000603124 139 ntBASIC-3.3□□□□□ -2.94
HLA-DRB4X5D2U9 RNU6-1324P-201ENST00000384222 107 ntBASIC-3.31□□□□□ -2.94
HLA-DRB4X5D2U9 MIRLET7A3-201ENST00000362116 74 ntBASIC-3.32□□□□□ -2.94
HLA-DRB4X5D2U9 SNORD116-4-201ENST00000384733 96 ntBASIC-3.32□□□□□ -2.94
HLA-DRB4X5D2U9 MIR548C-201ENST00000384815 97 ntBASIC-3.32□□□□□ -2.94
HLA-DRB4X5D2U9 DNAJC19P2-201ENST00000593340 302 ntBASIC-3.32□□□□□ -2.94
HLA-DRB4X5D2U9 Y_RNA.74-201ENST00000362911 99 ntBASIC-3.33□□□□□ -2.94
HLA-DRB4X5D2U9 Y_RNA.95-201ENST00000363079 95 ntBASIC-3.33□□□□□ -2.94
HLA-DRB4X5D2U9 Y_RNA.109-201ENST00000363215 102 ntBASIC-3.33□□□□□ -2.94
HLA-DRB4X5D2U9 RNU6-239P-201ENST00000390990 99 ntBASIC-3.33□□□□□ -2.94
HLA-DRB4X5D2U9 RNY3P8-201ENST00000411366 126 ntBASIC-3.33□□□□□ -2.94
HLA-DRB4X5D2U9 RNU6-1153P-201ENST00000516760 105 ntBASIC-3.33□□□□□ -2.94
HLA-DRB4X5D2U9 U2.18-201ENST00000622185 84 ntBASIC-3.33□□□□□ -2.94
HLA-DRB4X5D2U9 Y_RNA.309-201ENST00000365046 111 ntBASIC-3.34□□□□□ -2.94
HLA-DRB4X5D2U9 Y_RNA.318-201ENST00000365131 97 ntBASIC-3.34□□□□□ -2.94
HLA-DRB4X5D2U9 Y_RNA.626-201ENST00000411288 95 ntBASIC-3.35□□□□□ -2.95
HLA-DRB4X5D2U9 MIR3613-201ENST00000579844 87 ntBASIC-3.35□□□□□ -2.95
HLA-DRB4X5D2U9 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-3.35□□□□□ -2.95
HLA-DRB4X5D2U9 RNY1P1-201ENST00000364372 112 ntBASIC-3.36□□□□□ -2.95
HLA-DRB4X5D2U9 RNU6-915P-201ENST00000364943 103 ntBASIC-3.36□□□□□ -2.95
HLA-DRB4X5D2U9 Y_RNA.467-201ENST00000384297 102 ntBASIC-3.36□□□□□ -2.95
HLA-DRB4X5D2U9 RNU7-121P-201ENST00000516604 62 ntBASIC-3.36□□□□□ -2.95
HLA-DRB4X5D2U9 RNU6-834P-201ENST00000362367 110 ntBASIC-3.37□□□□□ -2.95
HLA-DRB4X5D2U9 SNORA27.2-201ENST00000363365 126 ntBASIC-3.37□□□□□ -2.95
HLA-DRB4X5D2U9 Y_RNA.435-201ENST00000384095 112 ntBASIC-3.37□□□□□ -2.95
HLA-DRB4X5D2U9 MIR3144-201ENST00000579460 79 ntBASIC-3.37□□□□□ -2.95
HLA-DRB4X5D2U9 MIR4796-201ENST00000580742 81 ntBASIC-3.37□□□□□ -2.95
HLA-DRB4X5D2U9 ZEB2_AS1_4.1-201ENST00000615159 78 ntBASIC-3.37□□□□□ -2.95
HLA-DRB4X5D2U9 Y_RNA.282-201ENST00000364793 102 ntBASIC-3.38□□□□□ -2.95
HLA-DRB4X5D2U9 Y_RNA.563-201ENST00000384707 108 ntBASIC-3.38□□□□□ -2.95
HLA-DRB4X5D2U9 RNU6-713P-201ENST00000384761 107 ntBASIC-3.38□□□□□ -2.95
HLA-DRB4X5D2U9 AC090616.3-202ENST00000583346 205 ntTSL 2 BASIC-3.38□□□□□ -2.95
HLA-DRB4X5D2U9 MTRNR2L9-201ENST00000622562 75 ntBASIC-3.38□□□□□ -2.95
HLA-DRB4X5D2U9 MIR369-201ENST00000362155 70 ntBASIC-3.39□□□□□ -2.95
HLA-DRB4X5D2U9 Y_RNA.266-201ENST00000364678 96 ntBASIC-3.39□□□□□ -2.95
HLA-DRB4X5D2U9 AC139792.2-201ENST00000624218 587 ntBASIC-3.39□□□□□ -2.95
HLA-DRB4X5D2U9 RNU6-247P-201ENST00000362636 107 ntBASIC-3.4□□□□□ -2.95
HLA-DRB4X5D2U9 RNU6-340P-201ENST00000364005 107 ntBASIC-3.4□□□□□ -2.95
HLA-DRB4X5D2U9 RNU6-681P-201ENST00000364012 104 ntBASIC-3.4□□□□□ -2.95
HLA-DRB4X5D2U9 SNORD114-13-201ENST00000364377 74 ntBASIC-3.4□□□□□ -2.95
HLA-DRB4X5D2U9 RNY4P10-201ENST00000365571 96 ntBASIC-3.4□□□□□ -2.95
HLA-DRB4X5D2U9 RNU6-1044P-201ENST00000384755 107 ntBASIC-3.4□□□□□ -2.95
HLA-DRB4X5D2U9 RNU6-918P-201ENST00000391219 106 ntBASIC-3.4□□□□□ -2.95
HLA-DRB4X5D2U9 AL450471.1-201ENST00000447509 127 ntBASIC-3.4□□□□□ -2.95
HLA-DRB4X5D2U9 RNU6-988P-201ENST00000519081 107 ntBASIC-3.4□□□□□ -2.95
HLA-DRB4X5D2U9 U6.104-201ENST00000637979 90 ntBASIC-3.4□□□□□ -2.95
HLA-DRB4X5D2U9 Y_RNA.58-201ENST00000362807 102 ntBASIC-3.41□□□□□ -2.96
HLA-DRB4X5D2U9 Y_RNA.158-201ENST00000363651 101 ntBASIC-3.41□□□□□ -2.96
HLA-DRB4X5D2U9 RNU6-645P-201ENST00000364649 106 ntBASIC-3.41□□□□□ -2.96
HLA-DRB4X5D2U9 RNY3P1-201ENST00000365085 102 ntBASIC-3.41□□□□□ -2.96
HLA-DRB4X5D2U9 Y_RNA.657-201ENST00000515983 102 ntBASIC-3.41□□□□□ -2.96
HLA-DRB4X5D2U9 RNU7-174P-201ENST00000516248 59 ntBASIC-3.41□□□□□ -2.96
HLA-DRB4X5D2U9 RNU6-781P-201ENST00000516377 101 ntBASIC-3.41□□□□□ -2.96
HLA-DRB4X5D2U9 AP000770.2-201ENST00000623694 100 ntBASIC-3.42□□□□□ -2.96
HLA-DRB4X5D2U9 Y_RNA.398-201ENST00000383952 99 ntBASIC-3.44□□□□□ -2.96
HLA-DRB4X5D2U9 RNU6-106P-201ENST00000384405 107 ntBASIC-3.44□□□□□ -2.96
HLA-DRB4X5D2U9 RNU6-460P-201ENST00000391158 108 ntBASIC-3.44□□□□□ -2.96
HLA-DRB4X5D2U9 SNORD42.2-201ENST00000365570 69 ntBASIC-3.45□□□□□ -2.96
HLA-DRB4X5D2U9 MIR548AA1-201ENST00000384971 97 ntBASIC-3.45□□□□□ -2.96
HLA-DRB4X5D2U9 Y_RNA.325-201ENST00000365171 122 ntBASIC-3.46□□□□□ -2.96
HLA-DRB4X5D2U9 RNU6-587P-201ENST00000391282 106 ntBASIC-3.46□□□□□ -2.96
HLA-DRB4X5D2U9 RNU7-197P-201ENST00000458836 62 ntBASIC-3.46□□□□□ -2.96
HLA-DRB4X5D2U9 RNU6-1081P-201ENST00000384537 107 ntBASIC-3.47□□□□□ -2.96
HLA-DRB4X5D2U9 Y_RNA.612-201ENST00000410717 95 ntBASIC-3.47□□□□□ -2.96
HLA-DRB4X5D2U9 AC025166.1-201ENST00000612411 163 ntBASIC-3.47□□□□□ -2.96
HLA-DRB4X5D2U9 RNU6-530P-201ENST00000391180 107 ntBASIC-3.48□□□□□ -2.97
HLA-DRB4X5D2U9 MIR548N-201ENST00000408742 75 ntBASIC-3.48□□□□□ -2.97
HLA-DRB4X5D2U9 AL158147.1-201ENST00000443970 75 ntBASIC-3.48□□□□□ -2.97
HLA-DRB4X5D2U9 RNU6-1219P-201ENST00000516143 112 ntBASIC-3.48□□□□□ -2.97
HLA-DRB4X5D2U9 MIR4777-201ENST00000583710 86 ntBASIC-3.48□□□□□ -2.97
HLA-DRB4X5D2U9 RNU6-623P-201ENST00000363143 105 ntBASIC-3.49□□□□□ -2.97
HLA-DRB4X5D2U9 RNU6-912P-201ENST00000363800 104 ntBASIC-3.49□□□□□ -2.97
HLA-DRB4X5D2U9 AL359920.1-201ENST00000618332 176 ntBASIC-3.49□□□□□ -2.97
HLA-DRB4X5D2U9 RNU4-11P-201ENST00000365287 132 ntBASIC-3.5□□□□□ -2.97
HLA-DRB4X5D2U9 MTND2P23-201ENST00000422990 651 ntBASIC-3.5□□□□□ -2.97
HLA-DRB4X5D2U9 SNORD63.2-201ENST00000516303 64 ntBASIC-3.5□□□□□ -2.97
HLA-DRB4X5D2U9 MIR4680-201ENST00000580906 66 ntBASIC-3.5□□□□□ -2.97
Retrieved 100 of 98,524 protein–RNA pairs in 172.7 ms