Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 MIR106A-201ENST00000384870 81 ntBASIC0.32□□□□□ -2.36
PCDHB1Q9Y5F3 RNU6-663P-201ENST00000391105 106 ntBASIC0.32□□□□□ -2.36
PCDHB1Q9Y5F3 SNORD30.1-201ENST00000391309 70 ntBASIC0.32□□□□□ -2.36
PCDHB1Q9Y5F3 MIR4315-1-201ENST00000636800 73 ntBASIC0.32□□□□□ -2.36
PCDHB1Q9Y5F3 MIR4315-2-201ENST00000640925 73 ntBASIC0.32□□□□□ -2.36
PCDHB1Q9Y5F3 MIR876-201ENST00000401147 81 ntBASIC0.31□□□□□ -2.36
PCDHB1Q9Y5F3 MIR548H2-201ENST00000408874 88 ntBASIC0.31□□□□□ -2.36
PCDHB1Q9Y5F3 AC114801.3-201ENST00000510231 177 ntBASIC0.31□□□□□ -2.36
PCDHB1Q9Y5F3 RNU6-871P-201ENST00000516122 100 ntBASIC0.31□□□□□ -2.36
PCDHB1Q9Y5F3 RNU6-1216P-201ENST00000362590 107 ntBASIC0.29□□□□□ -2.36
PCDHB1Q9Y5F3 MIR521-2-201ENST00000384818 87 ntBASIC0.29□□□□□ -2.36
PCDHB1Q9Y5F3 MIR6718-201ENST00000616153 80 ntBASIC0.29□□□□□ -2.36
PCDHB1Q9Y5F3 RNU6-649P-201ENST00000384463 107 ntBASIC0.28□□□□□ -2.36
PCDHB1Q9Y5F3 RNU6-1162P-201ENST00000384443 104 ntBASIC0.27□□□□□ -2.37
PCDHB1Q9Y5F3 RNU6-337P-201ENST00000391243 106 ntBASIC0.27□□□□□ -2.37
PCDHB1Q9Y5F3 RNA5SP476-201ENST00000516613 103 ntBASIC0.27□□□□□ -2.37
PCDHB1Q9Y5F3 RNU6-782P-201ENST00000516852 104 ntBASIC0.27□□□□□ -2.37
PCDHB1Q9Y5F3 U6.96-201ENST00000636425 70 ntBASIC0.27□□□□□ -2.37
PCDHB1Q9Y5F3 Y_RNA.250-201ENST00000364542 110 ntBASIC0.26□□□□□ -2.37
PCDHB1Q9Y5F3 MIR548C-201ENST00000384815 97 ntBASIC0.26□□□□□ -2.37
PCDHB1Q9Y5F3 AC139453.2-201ENST00000487255 133 ntBASIC0.26□□□□□ -2.37
PCDHB1Q9Y5F3 RNA5SP285-201ENST00000516619 119 ntBASIC0.26□□□□□ -2.37
PCDHB1Q9Y5F3 U6.111-201ENST00000636093 83 ntBASIC0.26□□□□□ -2.37
PCDHB1Q9Y5F3 RNU6-668P-201ENST00000364180 107 ntBASIC0.25□□□□□ -2.37
PCDHB1Q9Y5F3 Y_RNA.443-201ENST00000384135 111 ntBASIC0.25□□□□□ -2.37
PCDHB1Q9Y5F3 RNU6-35P-201ENST00000384530 107 ntBASIC0.25□□□□□ -2.37
PCDHB1Q9Y5F3 SNORA75.1-201ENST00000391130 148 ntBASIC0.25□□□□□ -2.37
PCDHB1Q9Y5F3 RNU6-630P-201ENST00000391258 106 ntBASIC0.25□□□□□ -2.37
PCDHB1Q9Y5F3 Y_RNA.386-201ENST00000383913 105 ntBASIC0.24□□□□□ -2.37
PCDHB1Q9Y5F3 SNORA15B-2-201ENST00000384058 135 ntBASIC0.24□□□□□ -2.37
PCDHB1Q9Y5F3 SNORA15B-1-201ENST00000384334 135 ntBASIC0.24□□□□□ -2.37
PCDHB1Q9Y5F3 MIR593-201ENST00000384856 100 ntBASIC0.24□□□□□ -2.37
PCDHB1Q9Y5F3 RNA5SP163-201ENST00000410304 99 ntBASIC0.24□□□□□ -2.37
PCDHB1Q9Y5F3 MTND4LP1-201ENST00000446263 157 ntBASIC0.24□□□□□ -2.37
PCDHB1Q9Y5F3 RNU6-539P-201ENST00000516665 103 ntBASIC0.24□□□□□ -2.37
PCDHB1Q9Y5F3 AP000676.1-201ENST00000533307 52 ntBASIC0.24□□□□□ -2.37
PCDHB1Q9Y5F3 AC005520.4-201ENST00000604337 90 ntBASIC0.24□□□□□ -2.37
PCDHB1Q9Y5F3 AC104408.1-201ENST00000605241 170 ntBASIC0.24□□□□□ -2.37
PCDHB1Q9Y5F3 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.24□□□□□ -2.37
PCDHB1Q9Y5F3 MIR6773-201ENST00000612812 74 ntBASIC0.24□□□□□ -2.37
PCDHB1Q9Y5F3 MIR6514-201ENST00000622549 70 ntBASIC0.24□□□□□ -2.37
PCDHB1Q9Y5F3 MIR892B-201ENST00000401279 77 ntBASIC0.23□□□□□ -2.37
PCDHB1Q9Y5F3 RNU6-1089P-201ENST00000516473 104 ntBASIC0.23□□□□□ -2.37
PCDHB1Q9Y5F3 MIR548V-201ENST00000584165 80 ntBASIC0.23□□□□□ -2.37
PCDHB1Q9Y5F3 U2.7-201ENST00000619197 100 ntBASIC0.23□□□□□ -2.37
PCDHB1Q9Y5F3 RNU6-502P-201ENST00000362419 108 ntBASIC0.22□□□□□ -2.37
PCDHB1Q9Y5F3 CYP3A54P-201ENST00000566950 75 ntBASIC0.22□□□□□ -2.37
PCDHB1Q9Y5F3 SNORD115-25-201ENST00000362619 82 ntBASIC0.21□□□□□ -2.38
PCDHB1Q9Y5F3 RNU6-800P-201ENST00000384473 103 ntBASIC0.21□□□□□ -2.38
PCDHB1Q9Y5F3 MIR610-201ENST00000385139 96 ntBASIC0.21□□□□□ -2.38
PCDHB1Q9Y5F3 MIR5093-201ENST00000583199 100 ntBASIC0.21□□□□□ -2.38
PCDHB1Q9Y5F3 SNORD114-5-201ENST00000362928 70 ntBASIC0.2□□□□□ -2.38
PCDHB1Q9Y5F3 MIR1255B2-201ENST00000408618 67 ntBASIC0.2□□□□□ -2.38
PCDHB1Q9Y5F3 MIR4743-201ENST00000584576 69 ntBASIC0.2□□□□□ -2.38
PCDHB1Q9Y5F3 RNA5SP214-201ENST00000363378 118 ntBASIC0.19□□□□□ -2.38
PCDHB1Q9Y5F3 SNORA42.1-201ENST00000363515 137 ntBASIC0.19□□□□□ -2.38
PCDHB1Q9Y5F3 RNA5SP299-201ENST00000391203 116 ntBASIC0.19□□□□□ -2.38
PCDHB1Q9Y5F3 SNORA25.4-201ENST00000363666 124 ntBASIC0.18□□□□□ -2.38
PCDHB1Q9Y5F3 MIR145-201ENST00000384967 88 ntBASIC0.18□□□□□ -2.38
PCDHB1Q9Y5F3 MIR329-2-201ENST00000385029 84 ntBASIC0.18□□□□□ -2.38
PCDHB1Q9Y5F3 MIRLET7B-201ENST00000385140 83 ntBASIC0.18□□□□□ -2.38
PCDHB1Q9Y5F3 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.18□□□□□ -2.38
PCDHB1Q9Y5F3 MIR5190-201ENST00000581537 80 ntBASIC0.18□□□□□ -2.38
PCDHB1Q9Y5F3 Y_RNA.375-201ENST00000365625 101 ntBASIC0.17□□□□□ -2.38
PCDHB1Q9Y5F3 RNU6-1246P-201ENST00000391064 107 ntBASIC0.17□□□□□ -2.38
PCDHB1Q9Y5F3 HAR1A.1-201ENST00000459583 118 ntBASIC0.17□□□□□ -2.38
PCDHB1Q9Y5F3 RNU7-174P-201ENST00000516248 59 ntBASIC0.17□□□□□ -2.38
PCDHB1Q9Y5F3 RNU6-180P-201ENST00000516697 61 ntBASIC0.17□□□□□ -2.38
PCDHB1Q9Y5F3 MIR6759-201ENST00000638110 65 ntBASIC0.17□□□□□ -2.38
PCDHB1Q9Y5F3 RNA5SP98-201ENST00000363158 137 ntBASIC0.16□□□□□ -2.38
PCDHB1Q9Y5F3 SNORD114-9-201ENST00000364370 72 ntBASIC0.16□□□□□ -2.38
PCDHB1Q9Y5F3 MIR630-201ENST00000384957 97 ntBASIC0.16□□□□□ -2.38
PCDHB1Q9Y5F3 MIR548AG1-201ENST00000579932 66 ntBASIC0.16□□□□□ -2.38
PCDHB1Q9Y5F3 MIR6507-201ENST00000613630 70 ntBASIC0.16□□□□□ -2.38
PCDHB1Q9Y5F3 uc_338.36-201ENST00000622331 158 ntBASIC0.16□□□□□ -2.38
PCDHB1Q9Y5F3 MIR6086-201ENST00000638065 55 ntBASIC0.16□□□□□ -2.38
PCDHB1Q9Y5F3 TRAJ42-201ENST00000390495 66 ntAPPRIS P1 BASIC0.15□□□□□ -2.39
PCDHB1Q9Y5F3 MIR1295A-201ENST00000408463 79 ntBASIC0.15□□□□□ -2.39
PCDHB1Q9Y5F3 SNORD2-201ENST00000459163 69 ntBASIC0.15□□□□□ -2.39
PCDHB1Q9Y5F3 RNU6-518P-201ENST00000516056 96 ntBASIC0.15□□□□□ -2.39
PCDHB1Q9Y5F3 MIR519A2-201ENST00000384990 87 ntBASIC0.14□□□□□ -2.39
PCDHB1Q9Y5F3 CR383656.4-201ENST00000546909 122 ntBASIC0.14□□□□□ -2.39
PCDHB1Q9Y5F3 U4.4-201ENST00000620626 117 ntBASIC0.14□□□□□ -2.39
PCDHB1Q9Y5F3 MIR1265-201ENST00000408444 86 ntBASIC0.13□□□□□ -2.39
PCDHB1Q9Y5F3 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.13□□□□□ -2.39
PCDHB1Q9Y5F3 RNU6-929P-201ENST00000384429 107 ntBASIC0.12□□□□□ -2.39
PCDHB1Q9Y5F3 MIR517B-201ENST00000385102 67 ntBASIC0.12□□□□□ -2.39
PCDHB1Q9Y5F3 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.12□□□□□ -2.39
PCDHB1Q9Y5F3 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.12□□□□□ -2.39
PCDHB1Q9Y5F3 RNA5SP215-201ENST00000363440 122 ntBASIC0.11□□□□□ -2.39
PCDHB1Q9Y5F3 Y_RNA.340-201ENST00000365330 92 ntBASIC0.11□□□□□ -2.39
PCDHB1Q9Y5F3 RNU6-455P-201ENST00000384681 107 ntBASIC0.11□□□□□ -2.39
PCDHB1Q9Y5F3 MIR9-2-201ENST00000384838 87 ntBASIC0.11□□□□□ -2.39
PCDHB1Q9Y5F3 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.11□□□□□ -2.39
PCDHB1Q9Y5F3 AC244250.2-201ENST00000418731 148 ntBASIC0.11□□□□□ -2.39
PCDHB1Q9Y5F3 RNU7-165P-201ENST00000458864 60 ntBASIC0.11□□□□□ -2.39
PCDHB1Q9Y5F3 MIR4768-201ENST00000585270 74 ntBASIC0.11□□□□□ -2.39
PCDHB1Q9Y5F3 Y_RNA.325-201ENST00000365171 122 ntBASIC0.1□□□□□ -2.39
PCDHB1Q9Y5F3 RNU7-159P-201ENST00000459284 62 ntBASIC0.1□□□□□ -2.39
PCDHB1Q9Y5F3 MIR4636-201ENST00000582271 80 ntBASIC0.1□□□□□ -2.39
Retrieved 100 of 98,524 protein–RNA pairs in 243.2 ms