Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 snoU83B.1-201ENST00000517136 88 ntBASIC-0.41□□□□□ -2.48
SHANK1Q9Y566 AL365222.1-201ENST00000614661 98 ntBASIC-0.41□□□□□ -2.48
SHANK1Q9Y566 AP001318.4-201ENST00000616637 121 ntBASIC-0.41□□□□□ -2.48
SHANK1Q9Y566 RNU6-24P-201ENST00000384440 107 ntBASIC-0.42□□□□□ -2.48
SHANK1Q9Y566 MIR517B-201ENST00000385102 67 ntBASIC-0.42□□□□□ -2.48
SHANK1Q9Y566 AL353803.5-201ENST00000599815 141 ntBASIC-0.42□□□□□ -2.48
SHANK1Q9Y566 AC006254.2-201ENST00000603259 279 ntBASIC-0.42□□□□□ -2.48
SHANK1Q9Y566 RNU6-208P-201ENST00000362431 107 ntBASIC-0.42□□□□□ -2.48
SHANK1Q9Y566 Y_RNA.220-201ENST00000364244 109 ntBASIC-0.42□□□□□ -2.48
SHANK1Q9Y566 Y_RNA.264-201ENST00000364665 102 ntBASIC-0.42□□□□□ -2.48
SHANK1Q9Y566 RNU6-1131P-201ENST00000364955 107 ntBASIC-0.43□□□□□ -2.48
SHANK1Q9Y566 YWHAEP3-201ENST00000582767 121 ntBASIC-0.43□□□□□ -2.48
SHANK1Q9Y566 U7.3-201ENST00000616123 62 ntBASIC-0.43□□□□□ -2.48
SHANK1Q9Y566 MIR4773-1-201ENST00000637203 78 ntBASIC-0.43□□□□□ -2.48
SHANK1Q9Y566 SNORD64-201ENST00000386683 67 ntBASIC-0.43□□□□□ -2.48
SHANK1Q9Y566 MIR6509-201ENST00000614603 85 ntBASIC-0.43□□□□□ -2.48
SHANK1Q9Y566 MIR8068-201ENST00000618032 68 ntBASIC-0.43□□□□□ -2.48
SHANK1Q9Y566 Y_RNA.484-201ENST00000384389 103 ntBASIC-0.44□□□□□ -2.48
SHANK1Q9Y566 RNU6-1157P-201ENST00000384456 106 ntBASIC-0.44□□□□□ -2.48
SHANK1Q9Y566 Y_RNA.558-201ENST00000384685 113 ntBASIC-0.44□□□□□ -2.48
SHANK1Q9Y566 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-0.44□□□□□ -2.48
SHANK1Q9Y566 MIR1236-201ENST00000408340 102 ntBASIC-0.44□□□□□ -2.48
SHANK1Q9Y566 SNORD38.3-201ENST00000516599 73 ntBASIC-0.44□□□□□ -2.48
SHANK1Q9Y566 snoR1.1-201ENST00000628177 80 ntBASIC-0.44□□□□□ -2.48
SHANK1Q9Y566 SNORD113-1-201ENST00000365321 69 ntBASIC-0.45□□□□□ -2.48
SHANK1Q9Y566 RNU6-576P-201ENST00000390854 102 ntBASIC-0.45□□□□□ -2.48
SHANK1Q9Y566 Y_RNA.609-201ENST00000410669 89 ntBASIC-0.45□□□□□ -2.48
SHANK1Q9Y566 AL691482.2-201ENST00000457453 84 ntBASIC-0.45□□□□□ -2.48
SHANK1Q9Y566 SNORD42B-201ENST00000458893 67 ntBASIC-0.45□□□□□ -2.48
SHANK1Q9Y566 FGF7P7-201ENST00000514120 227 ntBASIC-0.45□□□□□ -2.48
SHANK1Q9Y566 RNU6-762P-201ENST00000517107 102 ntBASIC-0.45□□□□□ -2.48
SHANK1Q9Y566 SNORA24B-201ENST00000384176 131 ntBASIC-0.45□□□□□ -2.48
SHANK1Q9Y566 MIR203A-201ENST00000384836 110 ntBASIC-0.45□□□□□ -2.48
SHANK1Q9Y566 AL445193.1-201ENST00000441183 141 ntBASIC-0.45□□□□□ -2.48
SHANK1Q9Y566 AP000533.3-201ENST00000447704 118 ntBASIC-0.45□□□□□ -2.48
SHANK1Q9Y566 AC012531.4-201ENST00000616509 177 ntBASIC-0.45□□□□□ -2.48
SHANK1Q9Y566 RNU6-81P-201ENST00000365608 104 ntBASIC-0.46□□□□□ -2.48
SHANK1Q9Y566 Y_RNA.649-201ENST00000459077 103 ntBASIC-0.46□□□□□ -2.48
SHANK1Q9Y566 SNORD114-25-201ENST00000363742 72 ntBASIC-0.46□□□□□ -2.48
SHANK1Q9Y566 SNORD77.2-201ENST00000391045 68 ntBASIC-0.46□□□□□ -2.48
SHANK1Q9Y566 AL035461.1-201ENST00000421490 332 ntBASIC-0.46□□□□□ -2.48
SHANK1Q9Y566 RNU6-834P-201ENST00000362367 110 ntBASIC-0.47□□□□□ -2.48
SHANK1Q9Y566 RNU6-340P-201ENST00000364005 107 ntBASIC-0.47□□□□□ -2.48
SHANK1Q9Y566 RNU6-382P-201ENST00000365181 106 ntBASIC-0.47□□□□□ -2.48
SHANK1Q9Y566 RNU6-706P-201ENST00000517229 104 ntBASIC-0.47□□□□□ -2.48
SHANK1Q9Y566 MIR4668-201ENST00000582284 70 ntBASIC-0.47□□□□□ -2.48
SHANK1Q9Y566 AC104996.3-201ENST00000590718 94 ntBASIC-0.47□□□□□ -2.48
SHANK1Q9Y566 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-0.47□□□□□ -2.48
SHANK1Q9Y566 AC006160.2-201ENST00000637708 154 ntBASIC-0.47□□□□□ -2.48
SHANK1Q9Y566 MIR450A1-201ENST00000362262 91 ntBASIC-0.47□□□□□ -2.49
SHANK1Q9Y566 RNU6-1113P-201ENST00000384348 107 ntBASIC-0.47□□□□□ -2.49
SHANK1Q9Y566 SNORD116-22-201ENST00000384430 92 ntBASIC-0.47□□□□□ -2.49
SHANK1Q9Y566 RNU6-1081P-201ENST00000384537 107 ntBASIC-0.47□□□□□ -2.49
SHANK1Q9Y566 RNY1P7-201ENST00000384743 110 ntBASIC-0.47□□□□□ -2.49
SHANK1Q9Y566 RNU6-337P-201ENST00000391243 106 ntBASIC-0.47□□□□□ -2.49
SHANK1Q9Y566 UBL4A-207ENST00000630530 102 ntTSL 5 BASIC-0.47□□□□□ -2.49
SHANK1Q9Y566 SNORD115-27-201ENST00000364430 82 ntBASIC-0.48□□□□□ -2.49
SHANK1Q9Y566 Y_RNA.290-201ENST00000364879 114 ntBASIC-0.48□□□□□ -2.49
SHANK1Q9Y566 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-0.48□□□□□ -2.49
SHANK1Q9Y566 snoU13.13-201ENST00000458842 104 ntBASIC-0.48□□□□□ -2.49
SHANK1Q9Y566 RNA5SP169-201ENST00000517268 117 ntBASIC-0.48□□□□□ -2.49
SHANK1Q9Y566 AC145423.2-201ENST00000610631 239 ntBASIC-0.48□□□□□ -2.49
SHANK1Q9Y566 Y_RNA.544-201ENST00000384650 113 ntBASIC-0.49□□□□□ -2.49
SHANK1Q9Y566 RNU6-592P-201ENST00000411333 103 ntBASIC-0.49□□□□□ -2.49
SHANK1Q9Y566 RNU7-134P-201ENST00000458997 64 ntBASIC-0.49□□□□□ -2.49
SHANK1Q9Y566 RNU6-274P-201ENST00000459566 107 ntBASIC-0.49□□□□□ -2.49
SHANK1Q9Y566 RNU7-154P-201ENST00000516194 62 ntBASIC-0.49□□□□□ -2.49
SHANK1Q9Y566 RNU6-919P-201ENST00000516731 104 ntBASIC-0.49□□□□□ -2.49
SHANK1Q9Y566 MIR3115-201ENST00000577915 68 ntBASIC-0.49□□□□□ -2.49
SHANK1Q9Y566 RNU6-973P-201ENST00000364690 107 ntBASIC-0.49□□□□□ -2.49
SHANK1Q9Y566 SNORA33.1-201ENST00000364957 130 ntBASIC-0.49□□□□□ -2.49
SHANK1Q9Y566 TRAJ30-201ENST00000390507 57 ntAPPRIS P1 BASIC-0.49□□□□□ -2.49
SHANK1Q9Y566 Y_RNA.606-201ENST00000410579 103 ntBASIC-0.49□□□□□ -2.49
SHANK1Q9Y566 MIR6818-201ENST00000621576 65 ntBASIC-0.49□□□□□ -2.49
SHANK1Q9Y566 Y_RNA.403-201ENST00000383977 101 ntBASIC-0.5□□□□□ -2.49
SHANK1Q9Y566 MIR29B1-201ENST00000385015 81 ntBASIC-0.5□□□□□ -2.49
SHANK1Q9Y566 MIR1302-5-201ENST00000408164 150 ntBASIC-0.5□□□□□ -2.49
SHANK1Q9Y566 RNU6-990P-201ENST00000364385 104 ntBASIC-0.5□□□□□ -2.49
SHANK1Q9Y566 MIR518B-201ENST00000385127 83 ntBASIC-0.5□□□□□ -2.49
SHANK1Q9Y566 MIR4520-1-201ENST00000582609 70 ntBASIC-0.5□□□□□ -2.49
SHANK1Q9Y566 RNU6-1290P-201ENST00000362957 109 ntBASIC-0.51□□□□□ -2.49
SHANK1Q9Y566 RNU6-1039P-201ENST00000383931 107 ntBASIC-0.51□□□□□ -2.49
SHANK1Q9Y566 MIR521-2-201ENST00000384818 87 ntBASIC-0.51□□□□□ -2.49
SHANK1Q9Y566 MIR204-201ENST00000385200 110 ntBASIC-0.51□□□□□ -2.49
SHANK1Q9Y566 MIR496-201ENST00000385226 102 ntBASIC-0.51□□□□□ -2.49
SHANK1Q9Y566 AL353691.2-201ENST00000443795 59 ntBASIC-0.51□□□□□ -2.49
SHANK1Q9Y566 Y_RNA.633-201ENST00000459107 95 ntBASIC-0.51□□□□□ -2.49
SHANK1Q9Y566 RNU6-162P-201ENST00000516228 103 ntBASIC-0.51□□□□□ -2.49
SHANK1Q9Y566 RNU6-303P-201ENST00000517091 106 ntBASIC-0.51□□□□□ -2.49
SHANK1Q9Y566 RNU6-789P-201ENST00000517105 102 ntBASIC-0.52□□□□□ -2.49
SHANK1Q9Y566 MIR4464-201ENST00000580818 92 ntBASIC-0.52□□□□□ -2.49
SHANK1Q9Y566 SNORA63.4-201ENST00000362763 126 ntBASIC-0.52□□□□□ -2.49
SHANK1Q9Y566 SNORA2.1-201ENST00000363089 137 ntBASIC-0.52□□□□□ -2.49
SHANK1Q9Y566 MIR889-201ENST00000401280 79 ntBASIC-0.52□□□□□ -2.49
SHANK1Q9Y566 RNU6-406P-201ENST00000516470 107 ntBASIC-0.52□□□□□ -2.49
SHANK1Q9Y566 RNA5SP147-201ENST00000516493 109 ntBASIC-0.52□□□□□ -2.49
SHANK1Q9Y566 RNU6-633P-201ENST00000362612 103 ntBASIC-0.53□□□□□ -2.49
SHANK1Q9Y566 RNU6-824P-201ENST00000363724 104 ntBASIC-0.53□□□□□ -2.49
SHANK1Q9Y566 MIR1255B2-201ENST00000408618 67 ntBASIC-0.53□□□□□ -2.49
SHANK1Q9Y566 Y_RNA.698-201ENST00000516798 118 ntBASIC-0.53□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms