Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 MIR1297-201ENST00000637311 77 ntBASIC-0.08□□□□□ -2.42
VPS4AQ9UN37 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.09□□□□□ -2.42
VPS4AQ9UN37 SNORA26.2-201ENST00000390922 122 ntBASIC-0.09□□□□□ -2.42
VPS4AQ9UN37 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.1□□□□□ -2.43
VPS4AQ9UN37 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.1□□□□□ -2.43
VPS4AQ9UN37 SNORD114-15-201ENST00000364687 72 ntBASIC-0.1□□□□□ -2.43
VPS4AQ9UN37 MIR203A-201ENST00000384836 110 ntBASIC-0.1□□□□□ -2.43
VPS4AQ9UN37 MIR604-201ENST00000384880 94 ntBASIC-0.1□□□□□ -2.43
VPS4AQ9UN37 RNU6-502P-201ENST00000362419 108 ntBASIC-0.11□□□□□ -2.43
VPS4AQ9UN37 SNORD115-25-201ENST00000362619 82 ntBASIC-0.11□□□□□ -2.43
VPS4AQ9UN37 AC244250.2-201ENST00000418731 148 ntBASIC-0.11□□□□□ -2.43
VPS4AQ9UN37 RNU6-380P-201ENST00000410207 107 ntBASIC-0.12□□□□□ -2.43
VPS4AQ9UN37 AC021146.9-201ENST00000512503 156 ntBASIC-0.12□□□□□ -2.43
VPS4AQ9UN37 MIR6739-201ENST00000622461 75 ntBASIC-0.12□□□□□ -2.43
VPS4AQ9UN37 RNU6-330P-201ENST00000363015 107 ntBASIC-0.13□□□□□ -2.43
VPS4AQ9UN37 SNORA15B-2-201ENST00000384058 135 ntBASIC-0.13□□□□□ -2.43
VPS4AQ9UN37 SNORA15B-1-201ENST00000384334 135 ntBASIC-0.13□□□□□ -2.43
VPS4AQ9UN37 MIR214-201ENST00000385214 110 ntBASIC-0.13□□□□□ -2.43
VPS4AQ9UN37 RNU6-807P-201ENST00000516805 107 ntBASIC-0.13□□□□□ -2.43
VPS4AQ9UN37 MIR3675-201ENST00000583661 73 ntBASIC-0.13□□□□□ -2.43
VPS4AQ9UN37 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.14□□□□□ -2.43
VPS4AQ9UN37 SNORA18.1-201ENST00000363418 128 ntBASIC-0.14□□□□□ -2.43
VPS4AQ9UN37 RNU6-337P-201ENST00000391243 106 ntBASIC-0.14□□□□□ -2.43
VPS4AQ9UN37 AC108676.2-201ENST00000605225 163 ntBASIC-0.14□□□□□ -2.43
VPS4AQ9UN37 RNA5SP173-201ENST00000364857 136 ntBASIC-0.15□□□□□ -2.43
VPS4AQ9UN37 RNU6-900P-201ENST00000384498 102 ntBASIC-0.15□□□□□ -2.43
VPS4AQ9UN37 MIR9-2-201ENST00000384838 87 ntBASIC-0.15□□□□□ -2.43
VPS4AQ9UN37 snoU13.13-201ENST00000458842 104 ntBASIC-0.15□□□□□ -2.43
VPS4AQ9UN37 MIR3202-2-201ENST00000635980 79 ntBASIC-0.15□□□□□ -2.43
VPS4AQ9UN37 MIR521-2-201ENST00000384818 87 ntBASIC-0.16□□□□□ -2.44
VPS4AQ9UN37 RNU7-55P-201ENST00000459426 62 ntBASIC-0.16□□□□□ -2.44
VPS4AQ9UN37 RNA5SP147-201ENST00000516493 109 ntBASIC-0.16□□□□□ -2.44
VPS4AQ9UN37 MIR4645-201ENST00000583158 77 ntBASIC-0.16□□□□□ -2.44
VPS4AQ9UN37 MIR6773-201ENST00000612812 74 ntBASIC-0.16□□□□□ -2.44
VPS4AQ9UN37 RNU6-573P-201ENST00000383938 106 ntBASIC-0.17□□□□□ -2.44
VPS4AQ9UN37 SNORA32.1-201ENST00000364514 115 ntBASIC-0.18□□□□□ -2.44
VPS4AQ9UN37 SNORD49B-201ENST00000365172 72 ntBASIC-0.18□□□□□ -2.44
VPS4AQ9UN37 SNORA8.1-201ENST00000384250 140 ntBASIC-0.18□□□□□ -2.44
VPS4AQ9UN37 RNA5SP67-201ENST00000516422 131 ntBASIC-0.18□□□□□ -2.44
VPS4AQ9UN37 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.18□□□□□ -2.44
VPS4AQ9UN37 AP000676.1-201ENST00000533307 52 ntBASIC-0.18□□□□□ -2.44
VPS4AQ9UN37 MIR101-1-201ENST00000362265 75 ntBASIC-0.19□□□□□ -2.44
VPS4AQ9UN37 MIRLET7B-201ENST00000385140 83 ntBASIC-0.19□□□□□ -2.44
VPS4AQ9UN37 SNORA33.1-201ENST00000364957 130 ntBASIC-0.2□□□□□ -2.44
VPS4AQ9UN37 RNU6-455P-201ENST00000384681 107 ntBASIC-0.2□□□□□ -2.44
VPS4AQ9UN37 MIR4484-201ENST00000582855 83 ntBASIC-0.2□□□□□ -2.44
VPS4AQ9UN37 SNORD114-28-201ENST00000363610 72 ntBASIC-0.21□□□□□ -2.44
VPS4AQ9UN37 RNU6-1162P-201ENST00000384443 104 ntBASIC-0.21□□□□□ -2.44
VPS4AQ9UN37 SCARNA18B-201ENST00000458806 135 ntBASIC-0.21□□□□□ -2.44
VPS4AQ9UN37 SNORD4A-201ENST00000459174 72 ntBASIC-0.21□□□□□ -2.44
VPS4AQ9UN37 RNU6-228P-201ENST00000362700 106 ntBASIC-0.22□□□□□ -2.44
VPS4AQ9UN37 AC090617.8-201ENST00000623339 167 ntBASIC-0.22□□□□□ -2.44
VPS4AQ9UN37 U6.96-201ENST00000636425 70 ntBASIC-0.22□□□□□ -2.44
VPS4AQ9UN37 SNORD95.1-201ENST00000364099 68 ntBASIC-0.23□□□□□ -2.45
VPS4AQ9UN37 SNORD115-23-201ENST00000364461 82 ntBASIC-0.23□□□□□ -2.45
VPS4AQ9UN37 RNA5SP331-201ENST00000364986 107 ntBASIC-0.23□□□□□ -2.45
VPS4AQ9UN37 RNU6-1124P-201ENST00000384169 107 ntBASIC-0.23□□□□□ -2.45
VPS4AQ9UN37 RNU6-656P-201ENST00000516785 107 ntBASIC-0.23□□□□□ -2.45
VPS4AQ9UN37 MIR3666-201ENST00000607845 111 ntBASIC-0.23□□□□□ -2.45
VPS4AQ9UN37 AL590491.3-201ENST00000610731 82 ntBASIC-0.23□□□□□ -2.45
VPS4AQ9UN37 SNORD114-12-201ENST00000365400 75 ntBASIC-0.24□□□□□ -2.45
VPS4AQ9UN37 RNU6-279P-201ENST00000391297 101 ntBASIC-0.24□□□□□ -2.45
VPS4AQ9UN37 RNU6-973P-201ENST00000364690 107 ntBASIC-0.25□□□□□ -2.45
VPS4AQ9UN37 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.25□□□□□ -2.45
VPS4AQ9UN37 Y_RNA.610-201ENST00000410681 103 ntBASIC-0.25□□□□□ -2.45
VPS4AQ9UN37 SNORD78.1-201ENST00000390866 65 ntBASIC-0.26□□□□□ -2.45
VPS4AQ9UN37 AC096531.1-201ENST00000419107 107 ntBASIC-0.26□□□□□ -2.45
VPS4AQ9UN37 RPS29P8-201ENST00000445109 171 ntBASIC-0.26□□□□□ -2.45
VPS4AQ9UN37 SNORD45.1-201ENST00000363181 77 ntBASIC-0.27□□□□□ -2.45
VPS4AQ9UN37 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.27□□□□□ -2.45
VPS4AQ9UN37 MIR1255A-201ENST00000408338 113 ntBASIC-0.27□□□□□ -2.45
VPS4AQ9UN37 RNA5SP451-201ENST00000410588 110 ntBASIC-0.27□□□□□ -2.45
VPS4AQ9UN37 CYP3A54P-201ENST00000566950 75 ntBASIC-0.27□□□□□ -2.45
VPS4AQ9UN37 MIR8064-201ENST00000612863 90 ntBASIC-0.27□□□□□ -2.45
VPS4AQ9UN37 MIR409-201ENST00000362237 79 ntBASIC-0.28□□□□□ -2.45
VPS4AQ9UN37 SNORD115-22-201ENST00000364456 82 ntBASIC-0.28□□□□□ -2.45
VPS4AQ9UN37 RNU6-645P-201ENST00000364649 106 ntBASIC-0.28□□□□□ -2.45
VPS4AQ9UN37 RNA5SP300-201ENST00000391197 107 ntBASIC-0.28□□□□□ -2.45
VPS4AQ9UN37 MIR4263-201ENST00000584745 83 ntBASIC-0.28□□□□□ -2.45
VPS4AQ9UN37 Y_RNA.788-201ENST00000622394 112 ntBASIC-0.28□□□□□ -2.45
VPS4AQ9UN37 SNORD56B-201ENST00000384713 71 ntBASIC-0.29□□□□□ -2.46
VPS4AQ9UN37 RNU6-604P-201ENST00000390917 100 ntBASIC-0.29□□□□□ -2.46
VPS4AQ9UN37 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC-0.29□□□□□ -2.46
VPS4AQ9UN37 MIR8053-201ENST00000613344 75 ntBASIC-0.29□□□□□ -2.46
VPS4AQ9UN37 AL391099.1-201ENST00000624635 187 ntBASIC-0.29□□□□□ -2.46
VPS4AQ9UN37 MIR664A-201ENST00000626086 82 ntBASIC-0.29□□□□□ -2.46
VPS4AQ9UN37 RNU6-857P-201ENST00000515893 110 ntBASIC-0.3□□□□□ -2.46
VPS4AQ9UN37 RNU6-881P-201ENST00000516813 102 ntBASIC-0.3□□□□□ -2.46
VPS4AQ9UN37 MIR4280-201ENST00000582178 76 ntBASIC-0.3□□□□□ -2.46
VPS4AQ9UN37 MIR224-201ENST00000384889 81 ntBASIC-0.31□□□□□ -2.46
VPS4AQ9UN37 RNA5SP470-201ENST00000516463 106 ntBASIC-0.31□□□□□ -2.46
VPS4AQ9UN37 MIR3134-201ENST00000579433 74 ntBASIC-0.31□□□□□ -2.46
VPS4AQ9UN37 RNU6-24P-201ENST00000384440 107 ntBASIC-0.32□□□□□ -2.46
VPS4AQ9UN37 MIR4432-201ENST00000581823 84 ntBASIC-0.32□□□□□ -2.46
VPS4AQ9UN37 U7.4-201ENST00000614961 63 ntBASIC-0.32□□□□□ -2.46
VPS4AQ9UN37 RNU6-70P-201ENST00000516438 60 ntBASIC-0.33□□□□□ -2.46
VPS4AQ9UN37 RNA5SP66-201ENST00000517178 101 ntBASIC-0.33□□□□□ -2.46
VPS4AQ9UN37 RNU6-1241P-201ENST00000384536 107 ntBASIC-0.34□□□□□ -2.46
VPS4AQ9UN37 MIR1255B2-201ENST00000408618 67 ntBASIC-0.34□□□□□ -2.46
VPS4AQ9UN37 RNA5SP266-201ENST00000410273 108 ntBASIC-0.34□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 265.4 ms