Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 AC020913.3-201ENST00000594678 125 ntTSL 3 BASIC-1.13□□□□□ -2.59
CLCF1Q9UBD9 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.13□□□□□ -2.59
CLCF1Q9UBD9 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.14□□□□□ -2.59
CLCF1Q9UBD9 RNU2-51P-201ENST00000410708 197 ntBASIC-1.14□□□□□ -2.59
CLCF1Q9UBD9 MIR519C-201ENST00000385053 87 ntBASIC-1.15□□□□□ -2.59
CLCF1Q9UBD9 SNORD63.1-201ENST00000516178 80 ntBASIC-1.15□□□□□ -2.59
CLCF1Q9UBD9 snoU83B.1-201ENST00000517136 88 ntBASIC-1.15□□□□□ -2.59
CLCF1Q9UBD9 MIR6739-201ENST00000622461 75 ntBASIC-1.15□□□□□ -2.59
CLCF1Q9UBD9 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.15□□□□□ -2.59
CLCF1Q9UBD9 RNU6-834P-201ENST00000362367 110 ntBASIC-1.16□□□□□ -2.6
CLCF1Q9UBD9 RNU6-766P-201ENST00000362478 107 ntBASIC-1.16□□□□□ -2.6
CLCF1Q9UBD9 RNU6-81P-201ENST00000365608 104 ntBASIC-1.16□□□□□ -2.6
CLCF1Q9UBD9 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.16□□□□□ -2.6
CLCF1Q9UBD9 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.16□□□□□ -2.6
CLCF1Q9UBD9 RNU7-154P-201ENST00000516194 62 ntBASIC-1.16□□□□□ -2.6
CLCF1Q9UBD9 AL365222.1-201ENST00000614661 98 ntBASIC-1.16□□□□□ -2.6
CLCF1Q9UBD9 MIR6129-201ENST00000616087 109 ntBASIC-1.16□□□□□ -2.6
CLCF1Q9UBD9 RNU6-340P-201ENST00000364005 107 ntBASIC-1.17□□□□□ -2.6
CLCF1Q9UBD9 SNORA19-201ENST00000384737 128 ntBASIC-1.17□□□□□ -2.6
CLCF1Q9UBD9 MIR548AG1-201ENST00000579932 66 ntBASIC-1.17□□□□□ -2.6
CLCF1Q9UBD9 SNORD115-22-201ENST00000364456 82 ntBASIC-1.18□□□□□ -2.6
CLCF1Q9UBD9 SNORD77.2-201ENST00000391045 68 ntBASIC-1.18□□□□□ -2.6
CLCF1Q9UBD9 MIR8485-201ENST00000401372 91 ntBASIC-1.18□□□□□ -2.6
CLCF1Q9UBD9 RNU6-158P-201ENST00000517104 100 ntBASIC-1.18□□□□□ -2.6
CLCF1Q9UBD9 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.18□□□□□ -2.6
CLCF1Q9UBD9 MIR2052-201ENST00000636055 55 ntBASIC-1.18□□□□□ -2.6
CLCF1Q9UBD9 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.19□□□□□ -2.6
CLCF1Q9UBD9 MIR519A2-201ENST00000384990 87 ntBASIC-1.19□□□□□ -2.6
CLCF1Q9UBD9 RNU6-589P-201ENST00000516485 107 ntBASIC-1.19□□□□□ -2.6
CLCF1Q9UBD9 SNORD115-37-201ENST00000363768 82 ntBASIC-1.2□□□□□ -2.6
CLCF1Q9UBD9 MTATP8P2-201ENST00000435212 202 ntBASIC-1.2□□□□□ -2.6
CLCF1Q9UBD9 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.2□□□□□ -2.6
CLCF1Q9UBD9 AL627230.5-201ENST00000619807 58 ntBASIC-1.2□□□□□ -2.6
CLCF1Q9UBD9 SNORD115-27-201ENST00000364430 82 ntBASIC-1.21□□□□□ -2.6
CLCF1Q9UBD9 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.21□□□□□ -2.6
CLCF1Q9UBD9 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.22□□□□□ -2.6
CLCF1Q9UBD9 AL021921.1-201ENST00000442774 93 ntBASIC-1.22□□□□□ -2.6
CLCF1Q9UBD9 RNU6-518P-201ENST00000516056 96 ntBASIC-1.22□□□□□ -2.6
CLCF1Q9UBD9 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.23□□□□□ -2.61
CLCF1Q9UBD9 AL035461.1-201ENST00000421490 332 ntBASIC-1.23□□□□□ -2.61
CLCF1Q9UBD9 RNU7-88P-201ENST00000458752 63 ntBASIC-1.23□□□□□ -2.61
CLCF1Q9UBD9 RNY1P9-201ENST00000532431 109 ntBASIC-1.23□□□□□ -2.61
CLCF1Q9UBD9 AP002795.1-201ENST00000534879 84 ntBASIC-1.23□□□□□ -2.61
CLCF1Q9UBD9 MIR4324-201ENST00000584846 72 ntBASIC-1.23□□□□□ -2.61
CLCF1Q9UBD9 RNU6-633P-201ENST00000362612 103 ntBASIC-1.24□□□□□ -2.61
CLCF1Q9UBD9 SNORD115-33-201ENST00000363723 82 ntBASIC-1.24□□□□□ -2.61
CLCF1Q9UBD9 RNA5SP331-201ENST00000364986 107 ntBASIC-1.24□□□□□ -2.61
CLCF1Q9UBD9 RNU6-24P-201ENST00000384440 107 ntBASIC-1.24□□□□□ -2.61
CLCF1Q9UBD9 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.24□□□□□ -2.61
CLCF1Q9UBD9 SNORA26.4-201ENST00000391188 123 ntBASIC-1.25□□□□□ -2.61
CLCF1Q9UBD9 RNA5SP266-201ENST00000410273 108 ntBASIC-1.25□□□□□ -2.61
CLCF1Q9UBD9 AL031737.1-201ENST00000450125 223 ntBASIC-1.25□□□□□ -2.61
CLCF1Q9UBD9 RNU6-22P-201ENST00000384355 107 ntBASIC-1.26□□□□□ -2.61
CLCF1Q9UBD9 MIR548M-201ENST00000408260 86 ntBASIC-1.26□□□□□ -2.61
CLCF1Q9UBD9 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.26□□□□□ -2.61
CLCF1Q9UBD9 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.26□□□□□ -2.61
CLCF1Q9UBD9 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.26□□□□□ -2.61
CLCF1Q9UBD9 MIR4668-201ENST00000582284 70 ntBASIC-1.26□□□□□ -2.61
CLCF1Q9UBD9 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.27□□□□□ -2.61
CLCF1Q9UBD9 MIR4306-201ENST00000583390 91 ntBASIC-1.27□□□□□ -2.61
CLCF1Q9UBD9 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.27□□□□□ -2.61
CLCF1Q9UBD9 MIR507-201ENST00000385234 94 ntBASIC-1.28□□□□□ -2.61
CLCF1Q9UBD9 AC093729.1-201ENST00000513074 128 ntBASIC-1.28□□□□□ -2.61
CLCF1Q9UBD9 MIR6738-201ENST00000619620 64 ntBASIC-1.28□□□□□ -2.61
CLCF1Q9UBD9 RNA5SP26-201ENST00000362406 119 ntBASIC-1.29□□□□□ -2.62
CLCF1Q9UBD9 MIR587-201ENST00000384845 96 ntBASIC-1.29□□□□□ -2.62
CLCF1Q9UBD9 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.29□□□□□ -2.62
CLCF1Q9UBD9 RPL35AP4-201ENST00000412007 102 ntBASIC-1.29□□□□□ -2.62
CLCF1Q9UBD9 RNU6-479P-201ENST00000516348 105 ntBASIC-1.29□□□□□ -2.62
CLCF1Q9UBD9 RNU6-656P-201ENST00000516785 107 ntBASIC-1.29□□□□□ -2.62
CLCF1Q9UBD9 U7.5-201ENST00000517224 61 ntBASIC-1.29□□□□□ -2.62
CLCF1Q9UBD9 MIR6818-201ENST00000621576 65 ntBASIC-1.29□□□□□ -2.62
CLCF1Q9UBD9 RNU6-624P-201ENST00000363411 107 ntBASIC-1.3□□□□□ -2.62
CLCF1Q9UBD9 SNORD116-22-201ENST00000384430 92 ntBASIC-1.3□□□□□ -2.62
CLCF1Q9UBD9 SNORD19-201ENST00000391191 68 ntBASIC-1.3□□□□□ -2.62
CLCF1Q9UBD9 RNU6-313P-201ENST00000516317 112 ntBASIC-1.3□□□□□ -2.62
CLCF1Q9UBD9 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.3□□□□□ -2.62
CLCF1Q9UBD9 RNU6-246P-201ENST00000384702 107 ntBASIC-1.31□□□□□ -2.62
CLCF1Q9UBD9 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.31□□□□□ -2.62
CLCF1Q9UBD9 MIR889-201ENST00000401280 79 ntBASIC-1.31□□□□□ -2.62
CLCF1Q9UBD9 MIR450A1-201ENST00000362262 91 ntBASIC-1.32□□□□□ -2.62
CLCF1Q9UBD9 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.32□□□□□ -2.62
CLCF1Q9UBD9 MT-TR-201ENST00000387439 65 ntBASIC-1.32□□□□□ -2.62
CLCF1Q9UBD9 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.32□□□□□ -2.62
CLCF1Q9UBD9 RNU4-61P-201ENST00000411243 107 ntBASIC-1.32□□□□□ -2.62
CLCF1Q9UBD9 SNORA40.13-201ENST00000516379 120 ntBASIC-1.32□□□□□ -2.62
CLCF1Q9UBD9 RNU6-807P-201ENST00000516805 107 ntBASIC-1.32□□□□□ -2.62
CLCF1Q9UBD9 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.33□□□□□ -2.62
CLCF1Q9UBD9 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.33□□□□□ -2.62
CLCF1Q9UBD9 AL353691.2-201ENST00000443795 59 ntBASIC-1.33□□□□□ -2.62
CLCF1Q9UBD9 SNORD57-201ENST00000448188 72 ntBASIC-1.33□□□□□ -2.62
CLCF1Q9UBD9 RNU6-732P-201ENST00000516033 103 ntBASIC-1.33□□□□□ -2.62
CLCF1Q9UBD9 U2.7-201ENST00000619197 100 ntBASIC-1.33□□□□□ -2.62
CLCF1Q9UBD9 MIR6874-201ENST00000635894 71 ntBASIC-1.33□□□□□ -2.62
CLCF1Q9UBD9 RNU6-645P-201ENST00000364649 106 ntBASIC-1.34□□□□□ -2.62
CLCF1Q9UBD9 RNU6-10P-201ENST00000384036 107 ntBASIC-1.34□□□□□ -2.62
CLCF1Q9UBD9 AP001318.4-201ENST00000616637 121 ntBASIC-1.34□□□□□ -2.62
CLCF1Q9UBD9 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.35□□□□□ -2.63
CLCF1Q9UBD9 Y_RNA.457-201ENST00000384237 111 ntBASIC-1.35□□□□□ -2.63
CLCF1Q9UBD9 MIR29B1-201ENST00000385015 81 ntBASIC-1.35□□□□□ -2.63
Retrieved 100 of 98,524 protein–RNA pairs in 12.1 ms