Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 Y_RNA.359-201ENST00000365498 102 ntBASIC-2.97□□□□□ -2.88
CHD7Q9P2D1 ZNF519P2-201ENST00000557032 169 ntBASIC-2.97□□□□□ -2.88
CHD7Q9P2D1 MIR548AI-201ENST00000579940 88 ntBASIC-2.97□□□□□ -2.88
CHD7Q9P2D1 snoU2_19.4-201ENST00000364329 80 ntBASIC-2.97□□□□□ -2.88
CHD7Q9P2D1 AP000240.1-201ENST00000609910 452 ntBASIC-2.97□□□□□ -2.88
CHD7Q9P2D1 RNY4P19-201ENST00000362530 96 ntBASIC-2.97□□□□□ -2.89
CHD7Q9P2D1 Y_RNA.309-201ENST00000365046 111 ntBASIC-2.97□□□□□ -2.89
CHD7Q9P2D1 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.97□□□□□ -2.89
CHD7Q9P2D1 Y_RNA.563-201ENST00000384707 108 ntBASIC-2.98□□□□□ -2.89
CHD7Q9P2D1 MIR519C-201ENST00000385053 87 ntBASIC-2.98□□□□□ -2.89
CHD7Q9P2D1 AP001318.4-201ENST00000616637 121 ntBASIC-2.98□□□□□ -2.89
CHD7Q9P2D1 Y_RNA.713-201ENST00000517013 96 ntBASIC-2.98□□□□□ -2.89
CHD7Q9P2D1 SNORA25.1-201ENST00000362326 128 ntBASIC-2.99□□□□□ -2.89
CHD7Q9P2D1 RNU6-940P-201ENST00000363433 104 ntBASIC-2.99□□□□□ -2.89
CHD7Q9P2D1 RNU6-381P-201ENST00000391259 108 ntBASIC-2.99□□□□□ -2.89
CHD7Q9P2D1 Y_RNA.592-201ENST00000410274 109 ntBASIC-2.99□□□□□ -2.89
CHD7Q9P2D1 RNU6-402P-201ENST00000410678 103 ntBASIC-2.99□□□□□ -2.89
CHD7Q9P2D1 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC-2.99□□□□□ -2.89
CHD7Q9P2D1 RNU6-673P-201ENST00000365084 104 ntBASIC-3□□□□□ -2.89
CHD7Q9P2D1 RNU6-578P-201ENST00000390980 103 ntBASIC-3□□□□□ -2.89
CHD7Q9P2D1 RNU7-4P-201ENST00000516961 62 ntBASIC-3□□□□□ -2.89
CHD7Q9P2D1 Y_RNA.544-201ENST00000384650 113 ntBASIC-3□□□□□ -2.89
CHD7Q9P2D1 RNU6-276P-201ENST00000516114 96 ntBASIC-3□□□□□ -2.89
CHD7Q9P2D1 RNU6-1008P-201ENST00000384160 104 ntBASIC-3.01□□□□□ -2.89
CHD7Q9P2D1 RNU6-1024P-201ENST00000384199 107 ntBASIC-3.01□□□□□ -2.89
CHD7Q9P2D1 MIR3149-201ENST00000584629 83 ntBASIC-3.01□□□□□ -2.89
CHD7Q9P2D1 Y_RNA.345-201ENST00000365384 92 ntBASIC-3.01□□□□□ -2.89
CHD7Q9P2D1 MIRLET7A1-201ENST00000362295 80 ntBASIC-3.02□□□□□ -2.89
CHD7Q9P2D1 AC074348.1-201ENST00000426503 132 ntBASIC-3.02□□□□□ -2.89
CHD7Q9P2D1 SNORD2.1-201ENST00000458762 69 ntBASIC-3.02□□□□□ -2.89
CHD7Q9P2D1 MIR1297-201ENST00000637311 77 ntBASIC-3.02□□□□□ -2.89
CHD7Q9P2D1 RNU6-211P-201ENST00000384047 107 ntBASIC-3.03□□□□□ -2.89
CHD7Q9P2D1 SCARNA15.1-201ENST00000516384 125 ntBASIC-3.03□□□□□ -2.89
CHD7Q9P2D1 AC037487.3-201ENST00000606668 112 ntBASIC-3.03□□□□□ -2.89
CHD7Q9P2D1 AC006927.3-201ENST00000638789 384 ntBASIC-3.03□□□□□ -2.89
CHD7Q9P2D1 Y_RNA.29-201ENST00000362570 113 ntBASIC-3.03□□□□□ -2.89
CHD7Q9P2D1 SNORD116-12-201ENST00000384468 92 ntBASIC-3.03□□□□□ -2.89
CHD7Q9P2D1 Y_RNA.532-201ENST00000384590 113 ntBASIC-3.03□□□□□ -2.89
CHD7Q9P2D1 RNU6-373P-201ENST00000411247 98 ntBASIC-3.03□□□□□ -2.89
CHD7Q9P2D1 RNU6-261P-201ENST00000459506 102 ntBASIC-3.03□□□□□ -2.89
CHD7Q9P2D1 RNU6-557P-201ENST00000516842 110 ntBASIC-3.03□□□□□ -2.89
CHD7Q9P2D1 DLEU2_1.2-201ENST00000614667 120 ntBASIC-3.03□□□□□ -2.89
CHD7Q9P2D1 MIR376A1-201ENST00000616574 68 ntBASIC-3.03□□□□□ -2.9
CHD7Q9P2D1 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC-3.04□□□□□ -2.9
CHD7Q9P2D1 Y_RNA.682-201ENST00000516457 100 ntBASIC-3.04□□□□□ -2.9
CHD7Q9P2D1 SNORA63.4-201ENST00000362763 126 ntBASIC-3.04□□□□□ -2.9
CHD7Q9P2D1 RNU6-1158P-201ENST00000391167 107 ntBASIC-3.04□□□□□ -2.9
CHD7Q9P2D1 Y_RNA.686-201ENST00000516548 134 ntBASIC-3.04□□□□□ -2.9
CHD7Q9P2D1 AL603755.1-201ENST00000619504 163 ntBASIC-3.04□□□□□ -2.9
CHD7Q9P2D1 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC-3.04□□□□□ -2.9
CHD7Q9P2D1 RNU6-639P-201ENST00000384074 107 ntBASIC-3.05□□□□□ -2.9
CHD7Q9P2D1 RNU6-768P-201ENST00000384683 107 ntBASIC-3.05□□□□□ -2.9
CHD7Q9P2D1 RNU6-876P-201ENST00000391295 104 ntBASIC-3.05□□□□□ -2.9
CHD7Q9P2D1 RNU6-130P-201ENST00000411112 103 ntBASIC-3.05□□□□□ -2.9
CHD7Q9P2D1 U8.20-201ENST00000459445 131 ntBASIC-3.05□□□□□ -2.9
CHD7Q9P2D1 AL121895.2-201ENST00000619558 447 ntBASIC-3.05□□□□□ -2.9
CHD7Q9P2D1 RNU6-686P-201ENST00000364839 107 ntBASIC-3.05□□□□□ -2.9
CHD7Q9P2D1 Y_RNA.445-201ENST00000384168 102 ntBASIC-3.05□□□□□ -2.9
CHD7Q9P2D1 RNU6-937P-201ENST00000384325 106 ntBASIC-3.05□□□□□ -2.9
CHD7Q9P2D1 RNU6-1326P-201ENST00000391262 107 ntBASIC-3.05□□□□□ -2.9
CHD7Q9P2D1 RNU6-89P-201ENST00000606519 100 ntBASIC-3.05□□□□□ -2.9
CHD7Q9P2D1 DLEU2_2.2-201ENST00000615474 90 ntBASIC-3.05□□□□□ -2.9
CHD7Q9P2D1 MIR6128-201ENST00000615528 109 ntBASIC-3.05□□□□□ -2.9
CHD7Q9P2D1 RNY3P2-201ENST00000362918 102 ntBASIC-3.06□□□□□ -2.9
CHD7Q9P2D1 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC-3.06□□□□□ -2.9
CHD7Q9P2D1 MIR548X-201ENST00000580069 75 ntBASIC-3.06□□□□□ -2.9
CHD7Q9P2D1 Y_RNA.594-201ENST00000410373 140 ntBASIC-3.06□□□□□ -2.9
CHD7Q9P2D1 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC-3.06□□□□□ -2.9
CHD7Q9P2D1 SNORD42A-201ENST00000459584 64 ntBASIC-3.06□□□□□ -2.9
CHD7Q9P2D1 RNU6-413P-201ENST00000384115 107 ntBASIC-3.06□□□□□ -2.9
CHD7Q9P2D1 SNORA75.5-201ENST00000391291 81 ntBASIC-3.06□□□□□ -2.9
CHD7Q9P2D1 MIR548P-201ENST00000408336 84 ntBASIC-3.06□□□□□ -2.9
CHD7Q9P2D1 RNU6-307P-201ENST00000516743 106 ntBASIC-3.06□□□□□ -2.9
CHD7Q9P2D1 RNU6-256P-201ENST00000516747 97 ntBASIC-3.06□□□□□ -2.9
CHD7Q9P2D1 MIR3662-201ENST00000637030 95 ntBASIC-3.06□□□□□ -2.9
CHD7Q9P2D1 Y_RNA.96-201ENST00000363092 109 ntBASIC-3.07□□□□□ -2.9
CHD7Q9P2D1 RNU6-806P-201ENST00000365147 105 ntBASIC-3.07□□□□□ -2.9
CHD7Q9P2D1 SNORD113-1-201ENST00000365321 69 ntBASIC-3.07□□□□□ -2.9
CHD7Q9P2D1 RNU5E-3P-201ENST00000515913 68 ntBASIC-3.07□□□□□ -2.9
CHD7Q9P2D1 MIR3913-1-201ENST00000577744 102 ntBASIC-3.07□□□□□ -2.9
CHD7Q9P2D1 RNU6-593P-201ENST00000364716 112 ntBASIC-3.07□□□□□ -2.9
CHD7Q9P2D1 SNORA25.5-201ENST00000363782 126 ntBASIC-3.08□□□□□ -2.9
CHD7Q9P2D1 MIR664A-201ENST00000626086 82 ntBASIC-3.08□□□□□ -2.9
CHD7Q9P2D1 MIR154-201ENST00000385243 84 ntBASIC-3.08□□□□□ -2.9
CHD7Q9P2D1 RNU7-61P-201ENST00000515897 61 ntBASIC-3.08□□□□□ -2.9
CHD7Q9P2D1 RNU6-1015P-201ENST00000517121 99 ntBASIC-3.08□□□□□ -2.9
CHD7Q9P2D1 AC130289.1-201ENST00000577321 73 ntBASIC-3.08□□□□□ -2.9
CHD7Q9P2D1 RNU6-1325P-201ENST00000364905 105 ntBASIC-3.09□□□□□ -2.9
CHD7Q9P2D1 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-3.09□□□□□ -2.9
CHD7Q9P2D1 SEPT14P3-201ENST00000439401 183 ntBASIC-3.09□□□□□ -2.9
CHD7Q9P2D1 AL732372.2-207ENST00000445840 183 ntBASIC-3.09□□□□□ -2.9
CHD7Q9P2D1 SEPT14P2-201ENST00000453405 183 ntBASIC-3.09□□□□□ -2.9
CHD7Q9P2D1 FO082796.1-201ENST00000523795 183 ntBASIC-3.09□□□□□ -2.9
CHD7Q9P2D1 RNU6-770P-201ENST00000363929 105 ntBASIC-3.09□□□□□ -2.9
CHD7Q9P2D1 Y_RNA.414-201ENST00000384011 101 ntBASIC-3.09□□□□□ -2.9
CHD7Q9P2D1 Y_RNA.615-201ENST00000410769 117 ntBASIC-3.09□□□□□ -2.9
CHD7Q9P2D1 Y_RNA.581-201ENST00000391017 97 ntBASIC-3.1□□□□□ -2.91
CHD7Q9P2D1 Y_RNA.722-201ENST00000517279 114 ntBASIC-3.1□□□□□ -2.91
CHD7Q9P2D1 AC015540.1-201ENST00000615828 501 ntBASIC-3.1□□□□□ -2.91
CHD7Q9P2D1 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC-3.1□□□□□ -2.91
Retrieved 100 of 98,524 protein–RNA pairs in 13.9 ms