Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MIR513C-201ENST00000401352 84 ntBASIC-1.98□□□□□ -2.73
VAPAQ9P0L0 RNU6-1023P-201ENST00000516137 106 ntBASIC-1.98□□□□□ -2.73
VAPAQ9P0L0 RNU7-153P-201ENST00000516455 62 ntBASIC-1.98□□□□□ -2.73
VAPAQ9P0L0 Y_RNA.10-201ENST00000362371 110 ntBASIC-1.99□□□□□ -2.73
VAPAQ9P0L0 RNU6-340P-201ENST00000364005 107 ntBASIC-1.99□□□□□ -2.73
VAPAQ9P0L0 RNU6-1160P-201ENST00000384546 104 ntBASIC-1.99□□□□□ -2.73
VAPAQ9P0L0 RNU6-861P-201ENST00000516745 106 ntBASIC-1.99□□□□□ -2.73
VAPAQ9P0L0 Y_RNA.74-201ENST00000362911 99 ntBASIC-2□□□□□ -2.73
VAPAQ9P0L0 Y_RNA.272-201ENST00000364696 102 ntBASIC-2□□□□□ -2.73
VAPAQ9P0L0 MIR548A3-201ENST00000385297 97 ntBASIC-2□□□□□ -2.73
VAPAQ9P0L0 AL450471.1-201ENST00000447509 127 ntBASIC-2□□□□□ -2.73
VAPAQ9P0L0 Y_RNA.668-201ENST00000516233 93 ntBASIC-2□□□□□ -2.73
VAPAQ9P0L0 RNU7-174P-201ENST00000516248 59 ntBASIC-2□□□□□ -2.73
VAPAQ9P0L0 RNU6-752P-201ENST00000516376 102 ntBASIC-2□□□□□ -2.73
VAPAQ9P0L0 RNU6-1061P-201ENST00000516530 99 ntBASIC-2□□□□□ -2.73
VAPAQ9P0L0 AP001340.1-201ENST00000624405 217 ntBASIC-2□□□□□ -2.73
VAPAQ9P0L0 Y_RNA.240-201ENST00000364469 95 ntBASIC-2.01□□□□□ -2.73
VAPAQ9P0L0 RNU6-1227P-201ENST00000383981 107 ntBASIC-2.01□□□□□ -2.73
VAPAQ9P0L0 Y_RNA.630-201ENST00000411370 108 ntBASIC-2.01□□□□□ -2.73
VAPAQ9P0L0 MIR3170-201ENST00000582699 77 ntBASIC-2.01□□□□□ -2.73
VAPAQ9P0L0 AC008737.2-201ENST00000599446 118 ntBASIC-2.01□□□□□ -2.73
VAPAQ9P0L0 Y_RNA.778-201ENST00000620203 90 ntBASIC-2.01□□□□□ -2.73
VAPAQ9P0L0 Y_RNA.145-201ENST00000363527 102 ntBASIC-2.02□□□□□ -2.73
VAPAQ9P0L0 SNORD58C-201ENST00000365223 64 ntBASIC-2.02□□□□□ -2.73
VAPAQ9P0L0 SNORD115-31-201ENST00000365318 82 ntBASIC-2.02□□□□□ -2.73
VAPAQ9P0L0 SNORD58A-201ENST00000383875 65 ntBASIC-2.02□□□□□ -2.73
VAPAQ9P0L0 RNU6-1152P-201ENST00000384576 107 ntBASIC-2.02□□□□□ -2.73
VAPAQ9P0L0 RNU6-1267P-201ENST00000410747 107 ntBASIC-2.02□□□□□ -2.73
VAPAQ9P0L0 AC013734.1-201ENST00000619329 111 ntBASIC-2.02□□□□□ -2.73
VAPAQ9P0L0 RNU6-766P-201ENST00000362478 107 ntBASIC-2.03□□□□□ -2.73
VAPAQ9P0L0 RNU6-682P-201ENST00000363843 106 ntBASIC-2.03□□□□□ -2.73
VAPAQ9P0L0 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.03□□□□□ -2.73
VAPAQ9P0L0 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.03□□□□□ -2.73
VAPAQ9P0L0 AC062037.2-201ENST00000610137 73 ntBASIC-2.03□□□□□ -2.73
VAPAQ9P0L0 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.03□□□□□ -2.73
VAPAQ9P0L0 RNU6-587P-201ENST00000391282 106 ntBASIC-2.04□□□□□ -2.74
VAPAQ9P0L0 Y_RNA.674-201ENST00000516362 113 ntBASIC-2.04□□□□□ -2.74
VAPAQ9P0L0 SNORA81.3-201ENST00000517283 198 ntBASIC-2.04□□□□□ -2.74
VAPAQ9P0L0 MIR3144-201ENST00000579460 79 ntBASIC-2.04□□□□□ -2.74
VAPAQ9P0L0 MIR23C-201ENST00000579846 100 ntBASIC-2.04□□□□□ -2.74
VAPAQ9P0L0 U6.97-201ENST00000636904 101 ntBASIC-2.04□□□□□ -2.74
VAPAQ9P0L0 Y_RNA.55-201ENST00000362797 102 ntBASIC-2.05□□□□□ -2.74
VAPAQ9P0L0 RNU6-1034P-201ENST00000365335 101 ntBASIC-2.05□□□□□ -2.74
VAPAQ9P0L0 RNU6-1111P-201ENST00000391118 107 ntBASIC-2.05□□□□□ -2.74
VAPAQ9P0L0 Y_RNA.591-201ENST00000410228 104 ntBASIC-2.05□□□□□ -2.74
VAPAQ9P0L0 MIR4723-201ENST00000585070 81 ntBASIC-2.05□□□□□ -2.74
VAPAQ9P0L0 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.05□□□□□ -2.74
VAPAQ9P0L0 U4.4-201ENST00000620626 117 ntBASIC-2.05□□□□□ -2.74
VAPAQ9P0L0 RNA5SP405-201ENST00000363059 114 ntBASIC-2.06□□□□□ -2.74
VAPAQ9P0L0 RNU6-194P-201ENST00000363862 105 ntBASIC-2.06□□□□□ -2.74
VAPAQ9P0L0 Y_RNA.420-201ENST00000384043 110 ntBASIC-2.06□□□□□ -2.74
VAPAQ9P0L0 MIR5009-201ENST00000578736 100 ntBASIC-2.06□□□□□ -2.74
VAPAQ9P0L0 U7.2-201ENST00000607576 63 ntBASIC-2.06□□□□□ -2.74
VAPAQ9P0L0 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.06□□□□□ -2.74
VAPAQ9P0L0 ST7-OT3_1.1-201ENST00000619607 74 ntBASIC-2.06□□□□□ -2.74
VAPAQ9P0L0 Y_RNA.459-201ENST00000384251 102 ntBASIC-2.07□□□□□ -2.74
VAPAQ9P0L0 Y_RNA.662-201ENST00000516028 97 ntBASIC-2.07□□□□□ -2.74
VAPAQ9P0L0 RNU6-118P-201ENST00000516552 102 ntBASIC-2.07□□□□□ -2.74
VAPAQ9P0L0 MIR606-201ENST00000384851 96 ntBASIC-2.08□□□□□ -2.74
VAPAQ9P0L0 MIR1302-3-201ENST00000408128 138 ntBASIC-2.08□□□□□ -2.74
VAPAQ9P0L0 MIR1236-201ENST00000408340 102 ntBASIC-2.08□□□□□ -2.74
VAPAQ9P0L0 snoU13.10-201ENST00000459301 103 ntBASIC-2.08□□□□□ -2.74
VAPAQ9P0L0 RNU6-982P-201ENST00000516216 102 ntBASIC-2.08□□□□□ -2.74
VAPAQ9P0L0 MIR4679-2-201ENST00000578358 77 ntBASIC-2.08□□□□□ -2.74
VAPAQ9P0L0 MIR548W-201ENST00000581970 74 ntBASIC-2.08□□□□□ -2.74
VAPAQ9P0L0 AC005520.4-201ENST00000604337 90 ntBASIC-2.08□□□□□ -2.74
VAPAQ9P0L0 RNU6-330P-201ENST00000363015 107 ntBASIC-2.09□□□□□ -2.74
VAPAQ9P0L0 RNU6-681P-201ENST00000364012 104 ntBASIC-2.09□□□□□ -2.74
VAPAQ9P0L0 RNU6-1108P-201ENST00000516308 104 ntBASIC-2.09□□□□□ -2.74
VAPAQ9P0L0 RNU6-1089P-201ENST00000516473 104 ntBASIC-2.09□□□□□ -2.74
VAPAQ9P0L0 Y_RNA.781-201ENST00000620301 103 ntBASIC-2.09□□□□□ -2.74
VAPAQ9P0L0 RNU6-247P-201ENST00000362636 107 ntBASIC-2.1□□□□□ -2.75
VAPAQ9P0L0 Y_RNA.297-201ENST00000364950 91 ntBASIC-2.1□□□□□ -2.75
VAPAQ9P0L0 RNU6-880P-201ENST00000384526 107 ntBASIC-2.1□□□□□ -2.75
VAPAQ9P0L0 MIR1207-201ENST00000408249 87 ntBASIC-2.1□□□□□ -2.75
VAPAQ9P0L0 Y_RNA.705-201ENST00000516862 110 ntBASIC-2.1□□□□□ -2.75
VAPAQ9P0L0 MIR3139-201ENST00000579145 76 ntBASIC-2.1□□□□□ -2.75
VAPAQ9P0L0 MIR548V-201ENST00000584165 80 ntBASIC-2.1□□□□□ -2.75
VAPAQ9P0L0 RNY4P27-201ENST00000363341 96 ntBASIC-2.11□□□□□ -2.75
VAPAQ9P0L0 RNU6-887P-201ENST00000410660 100 ntBASIC-2.11□□□□□ -2.75
VAPAQ9P0L0 MTCYBP9-201ENST00000431021 303 ntBASIC-2.11□□□□□ -2.75
VAPAQ9P0L0 Y_RNA.699-201ENST00000516803 93 ntBASIC-2.11□□□□□ -2.75
VAPAQ9P0L0 hsa-mir-4773-1.1-201ENST00000585225 78 ntBASIC-2.11□□□□□ -2.75
VAPAQ9P0L0 SNORD19B.1-201ENST00000630615 80 ntBASIC-2.11□□□□□ -2.75
VAPAQ9P0L0 MIR429-201ENST00000362106 83 ntBASIC-2.12□□□□□ -2.75
VAPAQ9P0L0 Y_RNA.375-201ENST00000365625 101 ntBASIC-2.12□□□□□ -2.75
VAPAQ9P0L0 SNORD77.2-201ENST00000391045 68 ntBASIC-2.12□□□□□ -2.75
VAPAQ9P0L0 RNU6-972P-201ENST00000391208 107 ntBASIC-2.12□□□□□ -2.75
VAPAQ9P0L0 MIR548X2-201ENST00000579776 100 ntBASIC-2.12□□□□□ -2.75
VAPAQ9P0L0 Y_RNA.346-201ENST00000365385 112 ntBASIC-2.13□□□□□ -2.75
VAPAQ9P0L0 SNORD116-18-201ENST00000383961 92 ntBASIC-2.13□□□□□ -2.75
VAPAQ9P0L0 RNU6-1081P-201ENST00000384537 107 ntBASIC-2.13□□□□□ -2.75
VAPAQ9P0L0 Y_RNA.525-201ENST00000384570 113 ntBASIC-2.13□□□□□ -2.75
VAPAQ9P0L0 MIR630-201ENST00000384957 97 ntBASIC-2.13□□□□□ -2.75
VAPAQ9P0L0 MIR548AA1-201ENST00000384971 97 ntBASIC-2.13□□□□□ -2.75
VAPAQ9P0L0 MIR568-201ENST00000385036 95 ntBASIC-2.14□□□□□ -2.75
VAPAQ9P0L0 RNY3P8-201ENST00000411366 126 ntBASIC-2.14□□□□□ -2.75
VAPAQ9P0L0 RNU6-698P-201ENST00000363523 107 ntBASIC-2.15□□□□□ -2.75
VAPAQ9P0L0 RNU6-34P-201ENST00000364874 107 ntBASIC-2.15□□□□□ -2.75
VAPAQ9P0L0 MIR579-201ENST00000385221 98 ntBASIC-2.15□□□□□ -2.75
Retrieved 100 of 98,524 protein–RNA pairs in 261.4 ms