Protein–RNA interactions for Protein: Q9N2J8

HERV-H_2q24.1 provirus ancestral Env polyprotein, humanhuman

Predictions only

Length 555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9N2J8 AC062037.1-201ENST00000605302 128 ntBASIC-0.32□□□□□ -2.46
Q9N2J8 SNORA8.1-201ENST00000384250 140 ntBASIC-0.33□□□□□ -2.46
Q9N2J8 RNU6-901P-201ENST00000384593 106 ntBASIC-0.33□□□□□ -2.46
Q9N2J8 MIRLET7B-201ENST00000385140 83 ntBASIC-0.33□□□□□ -2.46
Q9N2J8 RNA5SP300-201ENST00000391197 107 ntBASIC-0.33□□□□□ -2.46
Q9N2J8 MIR5589-201ENST00000579442 60 ntBASIC-0.33□□□□□ -2.46
Q9N2J8 MIR4802-201ENST00000581881 80 ntBASIC-0.33□□□□□ -2.46
Q9N2J8 MIR3675-201ENST00000583661 73 ntBASIC-0.33□□□□□ -2.46
Q9N2J8 MIR1245B-201ENST00000636115 69 ntBASIC-0.33□□□□□ -2.46
Q9N2J8 RNU6-1094P-201ENST00000362416 104 ntBASIC-0.34□□□□□ -2.46
Q9N2J8 MIR521-2-201ENST00000384818 87 ntBASIC-0.34□□□□□ -2.46
Q9N2J8 RNU6-337P-201ENST00000391243 106 ntBASIC-0.34□□□□□ -2.46
Q9N2J8 RNU6-320P-201ENST00000516511 106 ntBASIC-0.34□□□□□ -2.46
Q9N2J8 MIR8064-201ENST00000612863 90 ntBASIC-0.34□□□□□ -2.46
Q9N2J8 MIR6739-201ENST00000622461 75 ntBASIC-0.34□□□□□ -2.46
Q9N2J8 Y_RNA.219-201ENST00000364232 113 ntBASIC-0.35□□□□□ -2.47
Q9N2J8 SNORD73B-201ENST00000364394 72 ntBASIC-0.35□□□□□ -2.47
Q9N2J8 RNU6-973P-201ENST00000364690 107 ntBASIC-0.35□□□□□ -2.47
Q9N2J8 SNORA33.1-201ENST00000364957 130 ntBASIC-0.35□□□□□ -2.47
Q9N2J8 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.35□□□□□ -2.47
Q9N2J8 RNA5SP66-201ENST00000517178 101 ntBASIC-0.35□□□□□ -2.47
Q9N2J8 snoR1.1-201ENST00000628177 80 ntBASIC-0.35□□□□□ -2.47
Q9N2J8 MIR4788-201ENST00000639104 80 ntBASIC-0.35□□□□□ -2.47
Q9N2J8 SNORD114-28-201ENST00000363610 72 ntBASIC-0.36□□□□□ -2.47
Q9N2J8 Y_RNA.532-201ENST00000384590 113 ntBASIC-0.36□□□□□ -2.47
Q9N2J8 RNA5SP395-201ENST00000516567 118 ntBASIC-0.36□□□□□ -2.47
Q9N2J8 MIR4666B-201ENST00000578142 81 ntBASIC-0.36□□□□□ -2.47
Q9N2J8 AL590491.3-201ENST00000610731 82 ntBASIC-0.36□□□□□ -2.47
Q9N2J8 AL391099.1-201ENST00000624635 187 ntBASIC-0.36□□□□□ -2.47
Q9N2J8 RNU6-330P-201ENST00000363015 107 ntBASIC-0.37□□□□□ -2.47
Q9N2J8 RNA5SP275-201ENST00000363936 118 ntBASIC-0.37□□□□□ -2.47
Q9N2J8 Y_RNA.313-201ENST00000365095 103 ntBASIC-0.37□□□□□ -2.47
Q9N2J8 RNU6-1152P-201ENST00000384576 107 ntBASIC-0.37□□□□□ -2.47
Q9N2J8 AC096531.1-201ENST00000419107 107 ntBASIC-0.37□□□□□ -2.47
Q9N2J8 MIR4484-201ENST00000582855 83 ntBASIC-0.37□□□□□ -2.47
Q9N2J8 MIR4712-201ENST00000583750 82 ntBASIC-0.37□□□□□ -2.47
Q9N2J8 AP001180.6-201ENST00000584918 159 ntBASIC-0.38□□□□□ -2.47
Q9N2J8 RNU6-35P-201ENST00000384530 107 ntBASIC-0.39□□□□□ -2.47
Q9N2J8 SNORD56B-201ENST00000384713 71 ntBASIC-0.39□□□□□ -2.47
Q9N2J8 SNORA32.3-201ENST00000384772 121 ntBASIC-0.39□□□□□ -2.47
Q9N2J8 TRAJ28-201ENST00000390509 66 ntAPPRIS P1 BASIC-0.39□□□□□ -2.47
Q9N2J8 MIR4636-201ENST00000582271 80 ntBASIC-0.39□□□□□ -2.47
Q9N2J8 uc_338.36-201ENST00000622331 158 ntBASIC-0.39□□□□□ -2.47
Q9N2J8 SNORA26.2-201ENST00000390922 122 ntBASIC-0.4□□□□□ -2.47
Q9N2J8 Z95118.1-201ENST00000421372 247 ntBASIC-0.4□□□□□ -2.47
Q9N2J8 AL445193.1-201ENST00000441183 141 ntBASIC-0.4□□□□□ -2.47
Q9N2J8 AC093726.3-201ENST00000637588 150 ntBASIC-0.4□□□□□ -2.47
Q9N2J8 MIR4432-201ENST00000581823 84 ntBASIC-0.41□□□□□ -2.48
Q9N2J8 SNORD115-23-201ENST00000364461 82 ntBASIC-0.42□□□□□ -2.48
Q9N2J8 RNY4P29-201ENST00000410801 97 ntBASIC-0.42□□□□□ -2.48
Q9N2J8 MIR4493-201ENST00000584016 73 ntBASIC-0.42□□□□□ -2.48
Q9N2J8 AC090617.8-201ENST00000623339 167 ntBASIC-0.42□□□□□ -2.48
Q9N2J8 SNORD14C-201ENST00000365382 88 ntBASIC-0.43□□□□□ -2.48
Q9N2J8 TRAJ53-201ENST00000390485 66 ntAPPRIS P1 BASIC-0.43□□□□□ -2.48
Q9N2J8 RNA5SP470-201ENST00000516463 106 ntBASIC-0.43□□□□□ -2.48
Q9N2J8 CYP3A54P-201ENST00000566950 75 ntBASIC-0.43□□□□□ -2.48
Q9N2J8 MIR101-1-201ENST00000362265 75 ntBASIC-0.44□□□□□ -2.48
Q9N2J8 SNORD45.1-201ENST00000363181 77 ntBASIC-0.44□□□□□ -2.48
Q9N2J8 RNU6-604P-201ENST00000390917 100 ntBASIC-0.44□□□□□ -2.48
Q9N2J8 MIR1265-201ENST00000408444 86 ntBASIC-0.44□□□□□ -2.48
Q9N2J8 RNU6-758P-201ENST00000516292 89 ntBASIC-0.44□□□□□ -2.48
Q9N2J8 AL078612.1-201ENST00000533009 150 ntTSL 5 BASIC-0.44□□□□□ -2.48
Q9N2J8 Y_RNA.94-201ENST00000363068 106 ntBASIC-0.45□□□□□ -2.48
Q9N2J8 RNU6-645P-201ENST00000364649 106 ntBASIC-0.45□□□□□ -2.48
Q9N2J8 MIR1255B2-201ENST00000408618 67 ntBASIC-0.45□□□□□ -2.48
Q9N2J8 MIR1302-4-201ENST00000408701 150 ntBASIC-0.45□□□□□ -2.48
Q9N2J8 RNA5SP451-201ENST00000410588 110 ntBASIC-0.45□□□□□ -2.48
Q9N2J8 SNORD126-201ENST00000459475 77 ntBASIC-0.45□□□□□ -2.48
Q9N2J8 RNU6-656P-201ENST00000516785 107 ntBASIC-0.45□□□□□ -2.48
Q9N2J8 MIR3202-2-201ENST00000635980 79 ntBASIC-0.45□□□□□ -2.48
Q9N2J8 RNU6-787P-201ENST00000384032 107 ntBASIC-0.46□□□□□ -2.48
Q9N2J8 MIR604-201ENST00000384880 94 ntBASIC-0.46□□□□□ -2.48
Q9N2J8 MIR4280-201ENST00000582178 76 ntBASIC-0.46□□□□□ -2.48
Q9N2J8 MIR548AZ-201ENST00000616567 95 ntBASIC-0.46□□□□□ -2.48
Q9N2J8 SNORD114-11-201ENST00000363738 75 ntBASIC-0.47□□□□□ -2.48
Q9N2J8 Y_RNA.391-201ENST00000383933 94 ntBASIC-0.47□□□□□ -2.48
Q9N2J8 Y_RNA.696-201ENST00000516725 107 ntBASIC-0.47□□□□□ -2.48
Q9N2J8 MIR8053-201ENST00000613344 75 ntBASIC-0.47□□□□□ -2.48
Q9N2J8 MIR6854-201ENST00000614935 69 ntBASIC-0.47□□□□□ -2.48
Q9N2J8 MIR6851-201ENST00000617060 67 ntBASIC-0.47□□□□□ -2.48
Q9N2J8 SNORA62.4-201ENST00000365504 151 ntBASIC-0.48□□□□□ -2.49
Q9N2J8 RNU6-1184P-201ENST00000384588 108 ntBASIC-0.48□□□□□ -2.49
Q9N2J8 MIR196A2-201ENST00000385189 110 ntBASIC-0.48□□□□□ -2.49
Q9N2J8 Y_RNA.178-201ENST00000363832 102 ntBASIC-0.49□□□□□ -2.49
Q9N2J8 RNA5SP173-201ENST00000364857 136 ntBASIC-0.49□□□□□ -2.49
Q9N2J8 Y_RNA.388-201ENST00000383919 113 ntBASIC-0.49□□□□□ -2.49
Q9N2J8 SCARNA18B-201ENST00000458806 135 ntBASIC-0.49□□□□□ -2.49
Q9N2J8 MIR5704-201ENST00000584029 77 ntBASIC-0.49□□□□□ -2.49
Q9N2J8 MIR204-201ENST00000385200 110 ntBASIC-0.5□□□□□ -2.49
Q9N2J8 AL353803.5-201ENST00000599815 141 ntBASIC-0.5□□□□□ -2.49
Q9N2J8 RNA5SP25-201ENST00000410815 110 ntBASIC-0.51□□□□□ -2.49
Q9N2J8 AL021921.1-201ENST00000442774 93 ntBASIC-0.51□□□□□ -2.49
Q9N2J8 AC108676.2-201ENST00000605225 163 ntBASIC-0.51□□□□□ -2.49
Q9N2J8 MIR6086-201ENST00000638065 55 ntBASIC-0.51□□□□□ -2.49
Q9N2J8 RNA5SP368-201ENST00000364298 116 ntBASIC-0.52□□□□□ -2.49
Q9N2J8 RNU6-284P-201ENST00000411105 106 ntBASIC-0.52□□□□□ -2.49
Q9N2J8 SNORA13-201ENST00000458790 133 ntBASIC-0.52□□□□□ -2.49
Q9N2J8 RNU6-518P-201ENST00000516056 96 ntBASIC-0.52□□□□□ -2.49
Q9N2J8 RNU7-154P-201ENST00000516194 62 ntBASIC-0.52□□□□□ -2.49
Q9N2J8 SNORD38.3-201ENST00000516599 73 ntBASIC-0.52□□□□□ -2.49
Retrieved 100 of 98,524 protein–RNA pairs in 176 ms