Protein–RNA interactions for Protein: Q9H6T3

RPAP3, RNA polymerase II-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP3Q9H6T3 Y_RNA.107-201ENST00000363190 121 ntBASIC-1.34□□□□□ -2.62
RPAP3Q9H6T3 MIR29B1-201ENST00000385015 81 ntBASIC-1.34□□□□□ -2.62
RPAP3Q9H6T3 AL078595.1-201ENST00000404458 226 ntBASIC-1.34□□□□□ -2.62
RPAP3Q9H6T3 U7.3-201ENST00000616123 62 ntBASIC-1.34□□□□□ -2.62
RPAP3Q9H6T3 RNU6-209P-201ENST00000384118 107 ntBASIC-1.35□□□□□ -2.63
RPAP3Q9H6T3 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.35□□□□□ -2.63
RPAP3Q9H6T3 RNA5SP26-201ENST00000362406 119 ntBASIC-1.36□□□□□ -2.63
RPAP3Q9H6T3 RNU6-924P-201ENST00000362926 108 ntBASIC-1.36□□□□□ -2.63
RPAP3Q9H6T3 SNORD115-33-201ENST00000363723 82 ntBASIC-1.36□□□□□ -2.63
RPAP3Q9H6T3 RNU6-10P-201ENST00000384036 107 ntBASIC-1.36□□□□□ -2.63
RPAP3Q9H6T3 SNORA19-201ENST00000384737 128 ntBASIC-1.36□□□□□ -2.63
RPAP3Q9H6T3 RNU6-554P-201ENST00000410466 106 ntBASIC-1.36□□□□□ -2.63
RPAP3Q9H6T3 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.38□□□□□ -2.63
RPAP3Q9H6T3 RNU6-1113P-201ENST00000384348 107 ntBASIC-1.38□□□□□ -2.63
RPAP3Q9H6T3 RNU6-106P-201ENST00000384405 107 ntBASIC-1.38□□□□□ -2.63
RPAP3Q9H6T3 MIR521-2-201ENST00000384818 87 ntBASIC-1.38□□□□□ -2.63
RPAP3Q9H6T3 MIR519A2-201ENST00000384990 87 ntBASIC-1.38□□□□□ -2.63
RPAP3Q9H6T3 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.38□□□□□ -2.63
RPAP3Q9H6T3 AL450471.1-201ENST00000447509 127 ntBASIC-1.38□□□□□ -2.63
RPAP3Q9H6T3 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.38□□□□□ -2.63
RPAP3Q9H6T3 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.38□□□□□ -2.63
RPAP3Q9H6T3 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.39□□□□□ -2.63
RPAP3Q9H6T3 MIR889-201ENST00000401280 79 ntBASIC-1.39□□□□□ -2.63
RPAP3Q9H6T3 AP002795.1-201ENST00000534879 84 ntBASIC-1.39□□□□□ -2.63
RPAP3Q9H6T3 MIR548AG1-201ENST00000579932 66 ntBASIC-1.39□□□□□ -2.63
RPAP3Q9H6T3 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.39□□□□□ -2.63
RPAP3Q9H6T3 SNORD115-27-201ENST00000364430 82 ntBASIC-1.4□□□□□ -2.63
RPAP3Q9H6T3 RNU6-959P-201ENST00000384671 107 ntBASIC-1.4□□□□□ -2.63
RPAP3Q9H6T3 MIR587-201ENST00000384845 96 ntBASIC-1.4□□□□□ -2.63
RPAP3Q9H6T3 MIR527-201ENST00000385244 85 ntBASIC-1.4□□□□□ -2.63
RPAP3Q9H6T3 RNU4-61P-201ENST00000411243 107 ntBASIC-1.4□□□□□ -2.63
RPAP3Q9H6T3 MIR6129-201ENST00000616087 109 ntBASIC-1.4□□□□□ -2.63
RPAP3Q9H6T3 SNORD57-201ENST00000448188 72 ntBASIC-1.41□□□□□ -2.64
RPAP3Q9H6T3 RNU6-752P-201ENST00000516376 102 ntBASIC-1.41□□□□□ -2.64
RPAP3Q9H6T3 RNU6-706P-201ENST00000517229 104 ntBASIC-1.41□□□□□ -2.64
RPAP3Q9H6T3 MIR3115-201ENST00000577915 68 ntBASIC-1.41□□□□□ -2.64
RPAP3Q9H6T3 AL365222.1-201ENST00000614661 98 ntBASIC-1.41□□□□□ -2.64
RPAP3Q9H6T3 RNU6-576P-201ENST00000390854 102 ntBASIC-1.42□□□□□ -2.64
RPAP3Q9H6T3 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.42□□□□□ -2.64
RPAP3Q9H6T3 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.42□□□□□ -2.64
RPAP3Q9H6T3 AC008267.6-201ENST00000441664 139 ntBASIC-1.42□□□□□ -2.64
RPAP3Q9H6T3 MIR6739-201ENST00000622461 75 ntBASIC-1.42□□□□□ -2.64
RPAP3Q9H6T3 Y_RNA.514-201ENST00000384528 112 ntBASIC-1.43□□□□□ -2.64
RPAP3Q9H6T3 RNU7-154P-201ENST00000516194 62 ntBASIC-1.43□□□□□ -2.64
RPAP3Q9H6T3 AC091912.2-201ENST00000624798 167 ntBASIC-1.43□□□□□ -2.64
RPAP3Q9H6T3 MIR6874-201ENST00000635894 71 ntBASIC-1.43□□□□□ -2.64
RPAP3Q9H6T3 MIR507-201ENST00000385234 94 ntBASIC-1.44□□□□□ -2.64
RPAP3Q9H6T3 Y_RNA.583-201ENST00000391033 113 ntBASIC-1.44□□□□□ -2.64
RPAP3Q9H6T3 SNORD19-201ENST00000391191 68 ntBASIC-1.44□□□□□ -2.64
RPAP3Q9H6T3 AL353691.2-201ENST00000443795 59 ntBASIC-1.44□□□□□ -2.64
RPAP3Q9H6T3 RNU6-518P-201ENST00000516056 96 ntBASIC-1.44□□□□□ -2.64
RPAP3Q9H6T3 RNU6-340P-201ENST00000364005 107 ntBASIC-1.45□□□□□ -2.64
RPAP3Q9H6T3 RNA5SP192-201ENST00000364404 120 ntBASIC-1.45□□□□□ -2.64
RPAP3Q9H6T3 RNU6-732P-201ENST00000516033 103 ntBASIC-1.45□□□□□ -2.64
RPAP3Q9H6T3 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.45□□□□□ -2.64
RPAP3Q9H6T3 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.45□□□□□ -2.64
RPAP3Q9H6T3 MIR3165-201ENST00000579874 75 ntBASIC-1.46□□□□□ -2.64
RPAP3Q9H6T3 AC138207.3-201ENST00000585289 166 ntBASIC-1.46□□□□□ -2.64
RPAP3Q9H6T3 RNU6-681P-201ENST00000364012 104 ntBASIC-1.47□□□□□ -2.64
RPAP3Q9H6T3 RNU6-246P-201ENST00000384702 107 ntBASIC-1.47□□□□□ -2.64
RPAP3Q9H6T3 MIR519C-201ENST00000385053 87 ntBASIC-1.47□□□□□ -2.64
RPAP3Q9H6T3 SNX3P1X-201ENST00000414887 175 ntBASIC-1.47□□□□□ -2.64
RPAP3Q9H6T3 RNU7-88P-201ENST00000458752 63 ntBASIC-1.47□□□□□ -2.64
RPAP3Q9H6T3 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.48□□□□□ -2.65
RPAP3Q9H6T3 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.48□□□□□ -2.65
RPAP3Q9H6T3 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.48□□□□□ -2.65
RPAP3Q9H6T3 U7.5-201ENST00000517224 61 ntBASIC-1.48□□□□□ -2.65
RPAP3Q9H6T3 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.48□□□□□ -2.65
RPAP3Q9H6T3 RNU6-766P-201ENST00000362478 107 ntBASIC-1.49□□□□□ -2.65
RPAP3Q9H6T3 SNORD77.2-201ENST00000391045 68 ntBASIC-1.49□□□□□ -2.65
RPAP3Q9H6T3 RPL35AP4-201ENST00000412007 102 ntBASIC-1.49□□□□□ -2.65
RPAP3Q9H6T3 MIR4520-1-201ENST00000582609 70 ntBASIC-1.49□□□□□ -2.65
RPAP3Q9H6T3 MIR6502-201ENST00000617296 76 ntBASIC-1.49□□□□□ -2.65
RPAP3Q9H6T3 RNU6-164P-201ENST00000364604 103 ntBASIC-1.5□□□□□ -2.65
RPAP3Q9H6T3 HLA-S-202ENST00000425174 53 ntBASIC-1.5□□□□□ -2.65
RPAP3Q9H6T3 MIR5591-201ENST00000578248 65 ntBASIC-1.5□□□□□ -2.65
RPAP3Q9H6T3 MIR3671-201ENST00000580455 88 ntBASIC-1.5□□□□□ -2.65
RPAP3Q9H6T3 RNU6-81P-201ENST00000365608 104 ntBASIC-1.51□□□□□ -2.65
RPAP3Q9H6T3 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.51□□□□□ -2.65
RPAP3Q9H6T3 AL035461.1-201ENST00000421490 332 ntBASIC-1.51□□□□□ -2.65
RPAP3Q9H6T3 AL353795.2-201ENST00000431804 425 ntTSL 2 BASIC-1.51□□□□□ -2.65
RPAP3Q9H6T3 RNU6-589P-201ENST00000516485 107 ntBASIC-1.51□□□□□ -2.65
RPAP3Q9H6T3 MIR5683-201ENST00000636514 76 ntBASIC-1.51□□□□□ -2.65
RPAP3Q9H6T3 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.52□□□□□ -2.65
RPAP3Q9H6T3 MTATP8P2-201ENST00000435212 202 ntBASIC-1.52□□□□□ -2.65
RPAP3Q9H6T3 MIR3668-201ENST00000582138 75 ntBASIC-1.52□□□□□ -2.65
RPAP3Q9H6T3 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.53□□□□□ -2.65
RPAP3Q9H6T3 Y_RNA.495-201ENST00000384435 112 ntBASIC-1.53□□□□□ -2.65
RPAP3Q9H6T3 AL021921.1-201ENST00000442774 93 ntBASIC-1.53□□□□□ -2.65
RPAP3Q9H6T3 AC090616.4-201ENST00000448026 115 ntBASIC-1.53□□□□□ -2.65
RPAP3Q9H6T3 RNU6-158P-201ENST00000517104 100 ntBASIC-1.53□□□□□ -2.65
RPAP3Q9H6T3 RNU6-656P-201ENST00000516785 107 ntBASIC-1.54□□□□□ -2.66
RPAP3Q9H6T3 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.55□□□□□ -2.66
RPAP3Q9H6T3 RNU6-1174P-201ENST00000517278 101 ntBASIC-1.55□□□□□ -2.66
RPAP3Q9H6T3 MIR450A1-201ENST00000362262 91 ntBASIC-1.56□□□□□ -2.66
RPAP3Q9H6T3 RNU6-834P-201ENST00000362367 110 ntBASIC-1.56□□□□□ -2.66
RPAP3Q9H6T3 RNU6-633P-201ENST00000362612 103 ntBASIC-1.56□□□□□ -2.66
RPAP3Q9H6T3 SNORD115-37-201ENST00000363768 82 ntBASIC-1.56□□□□□ -2.66
RPAP3Q9H6T3 U2.7-201ENST00000619197 100 ntBASIC-1.56□□□□□ -2.66
RPAP3Q9H6T3 MIR198-201ENST00000637333 62 ntBASIC-1.56□□□□□ -2.66
Retrieved 100 of 98,524 protein–RNA pairs in 329.7 ms