Protein–RNA interactions for Protein: Q9H204

MED28, Mediator of RNA polymerase II transcription subunit 28, humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MED28Q9H204 RNU6-774P-201ENST00000363238 107 ntBASIC-2.08□□□□□ -2.74
MED28Q9H204 Y_RNA.144-201ENST00000363521 113 ntBASIC-2.08□□□□□ -2.74
MED28Q9H204 SNORD58A-201ENST00000383875 65 ntBASIC-2.08□□□□□ -2.74
MED28Q9H204 RNU6-1113P-201ENST00000384348 107 ntBASIC-2.08□□□□□ -2.74
MED28Q9H204 RNU6-246P-201ENST00000384702 107 ntBASIC-2.08□□□□□ -2.74
MED28Q9H204 RNU6-772P-201ENST00000516042 105 ntBASIC-2.08□□□□□ -2.74
MED28Q9H204 RNU6-980P-201ENST00000516925 103 ntBASIC-2.08□□□□□ -2.74
MED28Q9H204 MIR548AG1-201ENST00000579932 66 ntBASIC-2.08□□□□□ -2.74
MED28Q9H204 MIR4796-201ENST00000580742 81 ntBASIC-2.08□□□□□ -2.74
MED28Q9H204 AL157777.2-201ENST00000258070 137 ntBASIC-2.09□□□□□ -2.74
MED28Q9H204 Y_RNA.400-201ENST00000383963 111 ntBASIC-2.09□□□□□ -2.74
MED28Q9H204 RNU6-738P-201ENST00000384531 106 ntBASIC-2.09□□□□□ -2.74
MED28Q9H204 SNORD115-27-201ENST00000364430 82 ntBASIC-2.1□□□□□ -2.75
MED28Q9H204 Y_RNA.284-201ENST00000364806 102 ntBASIC-2.1□□□□□ -2.75
MED28Q9H204 RNU6-972P-201ENST00000391208 107 ntBASIC-2.1□□□□□ -2.75
MED28Q9H204 RPL35AP4-201ENST00000412007 102 ntBASIC-2.1□□□□□ -2.75
MED28Q9H204 AC090616.4-201ENST00000448026 115 ntBASIC-2.1□□□□□ -2.75
MED28Q9H204 Y_RNA.649-201ENST00000459077 103 ntBASIC-2.1□□□□□ -2.75
MED28Q9H204 Y_RNA.705-201ENST00000516862 110 ntBASIC-2.1□□□□□ -2.75
MED28Q9H204 MIR3139-201ENST00000579145 76 ntBASIC-2.1□□□□□ -2.75
MED28Q9H204 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC-2.1□□□□□ -2.75
MED28Q9H204 RNU6-867P-201ENST00000364956 107 ntBASIC-2.11□□□□□ -2.75
MED28Q9H204 RNU6-797P-201ENST00000363101 109 ntBASIC-2.12□□□□□ -2.75
MED28Q9H204 RNU6-1174P-201ENST00000517278 101 ntBASIC-2.12□□□□□ -2.75
MED28Q9H204 Y_RNA.71-201ENST00000362892 104 ntBASIC-2.13□□□□□ -2.75
MED28Q9H204 Y_RNA.103-201ENST00000363171 102 ntBASIC-2.13□□□□□ -2.75
MED28Q9H204 RNU6-168P-201ENST00000516189 101 ntBASIC-2.13□□□□□ -2.75
MED28Q9H204 RNU6-804P-201ENST00000384286 107 ntBASIC-2.14□□□□□ -2.75
MED28Q9H204 RNU6-887P-201ENST00000410660 100 ntBASIC-2.14□□□□□ -2.75
MED28Q9H204 AL450471.1-201ENST00000447509 127 ntBASIC-2.14□□□□□ -2.75
MED28Q9H204 VTRNA2-1-201ENST00000602301 127 ntBASIC-2.14□□□□□ -2.75
MED28Q9H204 MIR1236-201ENST00000408340 102 ntBASIC-2.15□□□□□ -2.75
MED28Q9H204 RNU6-656P-201ENST00000516785 107 ntBASIC-2.15□□□□□ -2.75
MED28Q9H204 ST7-OT3_3.1-201ENST00000611709 115 ntBASIC-2.15□□□□□ -2.75
MED28Q9H204 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-2.15□□□□□ -2.75
MED28Q9H204 U2.7-201ENST00000619197 100 ntBASIC-2.15□□□□□ -2.75
MED28Q9H204 Y_RNA.193-201ENST00000363979 102 ntBASIC-2.16□□□□□ -2.76
MED28Q9H204 Y_RNA.228-201ENST00000364346 98 ntBASIC-2.16□□□□□ -2.76
MED28Q9H204 Y_RNA.564-201ENST00000384708 106 ntBASIC-2.16□□□□□ -2.76
MED28Q9H204 MIR548Q-201ENST00000408404 100 ntBASIC-2.16□□□□□ -2.76
MED28Q9H204 AC013248.1-201ENST00000455092 232 ntTSL 3 BASIC-2.16□□□□□ -2.76
MED28Q9H204 RNU6-807P-201ENST00000516805 107 ntBASIC-2.16□□□□□ -2.76
MED28Q9H204 MIR3144-201ENST00000579460 79 ntBASIC-2.16□□□□□ -2.76
MED28Q9H204 Y_RNA.812-201ENST00000610788 101 ntBASIC-2.16□□□□□ -2.76
MED28Q9H204 Y_RNA.784-201ENST00000613803 101 ntBASIC-2.16□□□□□ -2.76
MED28Q9H204 Y_RNA.787-201ENST00000616522 101 ntBASIC-2.16□□□□□ -2.76
MED28Q9H204 Y_RNA.780-201ENST00000617336 101 ntBASIC-2.16□□□□□ -2.76
MED28Q9H204 Y_RNA.801-201ENST00000619005 101 ntBASIC-2.16□□□□□ -2.76
MED28Q9H204 Y_RNA.8-201ENST00000362353 102 ntBASIC-2.17□□□□□ -2.76
MED28Q9H204 RNU6-340P-201ENST00000364005 107 ntBASIC-2.17□□□□□ -2.76
MED28Q9H204 Y_RNA.398-201ENST00000383952 99 ntBASIC-2.17□□□□□ -2.76
MED28Q9H204 Y_RNA.609-201ENST00000410669 89 ntBASIC-2.17□□□□□ -2.76
MED28Q9H204 MTND4LP9-201ENST00000427694 174 ntBASIC-2.17□□□□□ -2.76
MED28Q9H204 RNU6-200P-201ENST00000364743 107 ntBASIC-2.18□□□□□ -2.76
MED28Q9H204 MT-TM-201ENST00000387377 68 ntBASIC-2.18□□□□□ -2.76
MED28Q9H204 AC018880.2-201ENST00000414265 201 ntBASIC-2.18□□□□□ -2.76
MED28Q9H204 SNORD54-201ENST00000459159 67 ntBASIC-2.18□□□□□ -2.76
MED28Q9H204 SCARNA23-201ENST00000516060 130 ntBASIC-2.18□□□□□ -2.76
MED28Q9H204 RNU6-426P-201ENST00000516464 97 ntBASIC-2.18□□□□□ -2.76
MED28Q9H204 RNA5SP405-201ENST00000363059 114 ntBASIC-2.19□□□□□ -2.76
MED28Q9H204 Y_RNA.96-201ENST00000363092 109 ntBASIC-2.19□□□□□ -2.76
MED28Q9H204 SNORD116-10-201ENST00000363791 102 ntBASIC-2.19□□□□□ -2.76
MED28Q9H204 RNU6-681P-201ENST00000364012 104 ntBASIC-2.19□□□□□ -2.76
MED28Q9H204 CR2-207ENST00000640301 151 ntTSL 1 (best) BASIC-2.19□□□□□ -2.76
MED28Q9H204 RNU6-478P-201ENST00000363904 110 ntBASIC-2.2□□□□□ -2.76
MED28Q9H204 Y_RNA.489-201ENST00000384410 101 ntBASIC-2.2□□□□□ -2.76
MED28Q9H204 Y_RNA.603-201ENST00000410571 108 ntBASIC-2.2□□□□□ -2.76
MED28Q9H204 SNORA63-201ENST00000363450 132 ntBASIC-2.21□□□□□ -2.76
MED28Q9H204 RNU6-194P-201ENST00000363862 105 ntBASIC-2.21□□□□□ -2.76
MED28Q9H204 Y_RNA.211-201ENST00000364164 101 ntBASIC-2.21□□□□□ -2.76
MED28Q9H204 RNU6-400P-201ENST00000391173 106 ntBASIC-2.21□□□□□ -2.76
MED28Q9H204 AL035461.1-201ENST00000421490 332 ntBASIC-2.21□□□□□ -2.76
MED28Q9H204 RNU7-107P-201ENST00000459121 61 ntBASIC-2.21□□□□□ -2.76
MED28Q9H204 RNU6-537P-201ENST00000517277 103 ntBASIC-2.21□□□□□ -2.76
MED28Q9H204 MIR4503-201ENST00000582187 83 ntBASIC-2.21□□□□□ -2.76
MED28Q9H204 AC004792.1-201ENST00000614523 137 ntBASIC-2.21□□□□□ -2.76
MED28Q9H204 RNU7-153P-201ENST00000516455 62 ntBASIC-2.22□□□□□ -2.76
MED28Q9H204 Y_RNA.175-201ENST00000363794 111 ntBASIC-2.23□□□□□ -2.77
MED28Q9H204 Y_RNA.340-201ENST00000365330 92 ntBASIC-2.23□□□□□ -2.77
MED28Q9H204 RNU6-904P-201ENST00000516206 101 ntBASIC-2.23□□□□□ -2.77
MED28Q9H204 MIR3914-2-201ENST00000637339 95 ntBASIC-2.23□□□□□ -2.77
MED28Q9H204 RNA5SP93-201ENST00000362525 114 ntBASIC-2.24□□□□□ -2.77
MED28Q9H204 Y_RNA.236-201ENST00000364427 111 ntBASIC-2.24□□□□□ -2.77
MED28Q9H204 Y_RNA.525-201ENST00000384570 113 ntBASIC-2.24□□□□□ -2.77
MED28Q9H204 RNU6-79P-201ENST00000362511 107 ntBASIC-2.25□□□□□ -2.77
MED28Q9H204 Y_RNA.281-201ENST00000364774 94 ntBASIC-2.25□□□□□ -2.77
MED28Q9H204 SNORA40-201ENST00000388090 126 ntBASIC-2.25□□□□□ -2.77
MED28Q9H204 SNORD33.1-201ENST00000516213 88 ntBASIC-2.25□□□□□ -2.77
MED28Q9H204 RNU6-645P-201ENST00000364649 106 ntBASIC-2.26□□□□□ -2.77
MED28Q9H204 RNU6-458P-201ENST00000384179 107 ntBASIC-2.26□□□□□ -2.77
MED28Q9H204 MIR548C-201ENST00000384815 97 ntBASIC-2.26□□□□□ -2.77
MED28Q9H204 MIR548A3-201ENST00000385297 97 ntBASIC-2.26□□□□□ -2.77
MED28Q9H204 U6.58-201ENST00000613107 107 ntBASIC-2.26□□□□□ -2.77
MED28Q9H204 RNU6-696P-201ENST00000390834 107 ntBASIC-2.27□□□□□ -2.77
MED28Q9H204 SNORD77.2-201ENST00000391045 68 ntBASIC-2.27□□□□□ -2.77
MED28Q9H204 RNU6-1211P-201ENST00000459179 105 ntBASIC-2.27□□□□□ -2.77
MED28Q9H204 MTND5P41-201ENST00000517498 206 ntBASIC-2.27□□□□□ -2.77
MED28Q9H204 Y_RNA.403-201ENST00000383977 101 ntBASIC-2.28□□□□□ -2.77
MED28Q9H204 RNU6-574P-201ENST00000384265 107 ntBASIC-2.28□□□□□ -2.77
MED28Q9H204 AL117351.2-201ENST00000513571 157 ntBASIC-2.28□□□□□ -2.77
Retrieved 100 of 98,524 protein–RNA pairs in 208.5 ms