Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 RNU6-687P-201ENST00000516443 89 ntBASIC0.12□□□□□ -2.39
PKP4Q99569 RNU6-180P-201ENST00000516697 61 ntBASIC0.12□□□□□ -2.39
PKP4Q99569 MIR6514-201ENST00000622549 70 ntBASIC0.12□□□□□ -2.39
PKP4Q99569 RNA5SP98-201ENST00000363158 137 ntBASIC0.11□□□□□ -2.39
PKP4Q99569 SNORD114-9-201ENST00000364370 72 ntBASIC0.11□□□□□ -2.39
PKP4Q99569 MIR145-201ENST00000384967 88 ntBASIC0.11□□□□□ -2.39
PKP4Q99569 SNORA49-201ENST00000386157 136 ntBASIC0.11□□□□□ -2.39
PKP4Q99569 MIR1295A-201ENST00000408463 79 ntBASIC0.11□□□□□ -2.39
PKP4Q99569 RNU6-1015P-201ENST00000517121 99 ntBASIC0.1□□□□□ -2.39
PKP4Q99569 G3BP1-214ENST00000627077 114 ntTSL 5 BASIC0.1□□□□□ -2.39
PKP4Q99569 MIR148A-201ENST00000362215 68 ntBASIC0.09□□□□□ -2.4
PKP4Q99569 SNORD115-25-201ENST00000362619 82 ntBASIC0.09□□□□□ -2.4
PKP4Q99569 RNU6-645P-201ENST00000364649 106 ntBASIC0.09□□□□□ -2.4
PKP4Q99569 SNORA33.1-201ENST00000364957 130 ntBASIC0.09□□□□□ -2.4
PKP4Q99569 SNORD45A-201ENST00000384512 84 ntBASIC0.09□□□□□ -2.4
PKP4Q99569 RNU7-159P-201ENST00000459284 62 ntBASIC0.09□□□□□ -2.4
PKP4Q99569 U6.96-201ENST00000636425 70 ntBASIC0.09□□□□□ -2.4
PKP4Q99569 SNORD113.1-201ENST00000363280 73 ntBASIC0.08□□□□□ -2.4
PKP4Q99569 RNU6-1296P-201ENST00000383879 107 ntBASIC0.08□□□□□ -2.4
PKP4Q99569 RNU7-165P-201ENST00000458864 60 ntBASIC0.08□□□□□ -2.4
PKP4Q99569 RNU6-634P-201ENST00000459134 106 ntBASIC0.08□□□□□ -2.4
PKP4Q99569 RNU6-523P-201ENST00000516304 54 ntBASIC0.08□□□□□ -2.4
PKP4Q99569 RNU6-656P-201ENST00000516785 107 ntBASIC0.08□□□□□ -2.4
PKP4Q99569 RNU6-881P-201ENST00000516813 102 ntBASIC0.08□□□□□ -2.4
PKP4Q99569 SNORD114-5-201ENST00000362928 70 ntBASIC0.07□□□□□ -2.4
PKP4Q99569 RNU6-895P-201ENST00000384125 103 ntBASIC0.07□□□□□ -2.4
PKP4Q99569 RNU6-871P-201ENST00000516122 100 ntBASIC0.07□□□□□ -2.4
PKP4Q99569 RNU6-982P-201ENST00000516216 102 ntBASIC0.07□□□□□ -2.4
PKP4Q99569 SYCP2-202ENST00000371001 5479 ntAPPRIS P2 TSL 1 (best) BASIC0.06□□□□□ -2.4
PKP4Q99569 RNA5SP257-201ENST00000363023 116 ntBASIC0.06□□□□□ -2.4
PKP4Q99569 Y_RNA.565-201ENST00000384719 101 ntBASIC0.06□□□□□ -2.4
PKP4Q99569 MTND4LP1-201ENST00000446263 157 ntBASIC0.06□□□□□ -2.4
PKP4Q99569 AP000676.1-201ENST00000533307 52 ntBASIC0.06□□□□□ -2.4
PKP4Q99569 MIR4768-201ENST00000585270 74 ntBASIC0.06□□□□□ -2.4
PKP4Q99569 MIR6773-201ENST00000612812 74 ntBASIC0.06□□□□□ -2.4
PKP4Q99569 RNU6-502P-201ENST00000362419 108 ntBASIC0.05□□□□□ -2.4
PKP4Q99569 SNORD115-31-201ENST00000365318 82 ntBASIC0.05□□□□□ -2.4
PKP4Q99569 RNU6-1216P-201ENST00000362590 107 ntBASIC0.04□□□□□ -2.4
PKP4Q99569 RNU6-337P-201ENST00000391243 106 ntBASIC0.04□□□□□ -2.4
PKP4Q99569 MIR4290-201ENST00000583807 95 ntBASIC0.03□□□□□ -2.4
PKP4Q99569 MIR6507-201ENST00000613630 70 ntBASIC0.03□□□□□ -2.4
PKP4Q99569 RNU6-668P-201ENST00000364180 107 ntBASIC0.02□□□□□ -2.41
PKP4Q99569 MIRLET7B-201ENST00000385140 83 ntBASIC0.02□□□□□ -2.41
PKP4Q99569 CYP3A54P-201ENST00000566950 75 ntBASIC0.02□□□□□ -2.41
PKP4Q99569 MIR2909-201ENST00000617113 69 ntBASIC0.02□□□□□ -2.41
PKP4Q99569 AC090617.8-201ENST00000623339 167 ntBASIC0.02□□□□□ -2.41
PKP4Q99569 RNU6-46P-201ENST00000383860 107 ntBASIC0.01□□□□□ -2.41
PKP4Q99569 AC104692.1-201ENST00000472406 90 ntBASIC0.01□□□□□ -2.41
PKP4Q99569 MIR4667-201ENST00000578933 66 ntBASIC0.01□□□□□ -2.41
PKP4Q99569 MIR5190-201ENST00000581537 80 ntBASIC0.01□□□□□ -2.41
PKP4Q99569 SNORD114-16-201ENST00000363044 70 ntBASIC0□□□□□ -2.41
PKP4Q99569 RNU6-929P-201ENST00000384429 107 ntBASIC0□□□□□ -2.41
PKP4Q99569 RNU6-540P-201ENST00000384622 101 ntBASIC0□□□□□ -2.41
PKP4Q99569 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0□□□□□ -2.41
PKP4Q99569 RNU6-1089P-201ENST00000516473 104 ntBASIC0□□□□□ -2.41
PKP4Q99569 Y_RNA.30-201ENST00000362572 97 ntBASIC-0.01□□□□□ -2.41
PKP4Q99569 RNU6-900P-201ENST00000384498 102 ntBASIC-0.01□□□□□ -2.41
PKP4Q99569 SNORD116-24-201ENST00000384549 92 ntBASIC-0.01□□□□□ -2.41
PKP4Q99569 RNU6-455P-201ENST00000384681 107 ntBASIC-0.01□□□□□ -2.41
PKP4Q99569 MIR548C-201ENST00000384815 97 ntBASIC-0.01□□□□□ -2.41
PKP4Q99569 RNU6-663P-201ENST00000391105 106 ntBASIC-0.01□□□□□ -2.41
PKP4Q99569 U2.7-201ENST00000619197 100 ntBASIC-0.01□□□□□ -2.41
PKP4Q99569 Clostridiales-1.4-201ENST00000636807 150 ntBASIC-0.01□□□□□ -2.41
PKP4Q99569 MIR371B-201ENST00000638082 66 ntBASIC-0.01□□□□□ -2.41
PKP4Q99569 SNORD30.1-201ENST00000391309 70 ntBASIC-0.02□□□□□ -2.41
PKP4Q99569 MIR1255B2-201ENST00000408618 67 ntBASIC-0.02□□□□□ -2.41
PKP4Q99569 AC244250.2-201ENST00000418731 148 ntBASIC-0.02□□□□□ -2.41
PKP4Q99569 RNU7-55P-201ENST00000459426 62 ntBASIC-0.02□□□□□ -2.41
PKP4Q99569 RNA5SP470-201ENST00000516463 106 ntBASIC-0.02□□□□□ -2.41
PKP4Q99569 RNA5SP215-201ENST00000363440 122 ntBASIC-0.03□□□□□ -2.41
PKP4Q99569 RNU6-649P-201ENST00000384463 107 ntBASIC-0.03□□□□□ -2.41
PKP4Q99569 MIR9-2-201ENST00000384838 87 ntBASIC-0.03□□□□□ -2.41
PKP4Q99569 TRAJ54-201ENST00000390484 60 ntAPPRIS P1 BASIC-0.03□□□□□ -2.41
PKP4Q99569 AL021921.1-201ENST00000442774 93 ntBASIC-0.03□□□□□ -2.41
PKP4Q99569 MIR1295B-201ENST00000636144 60 ntBASIC-0.03□□□□□ -2.41
PKP4Q99569 SNORD49B-201ENST00000365172 72 ntBASIC-0.04□□□□□ -2.42
PKP4Q99569 snoR1.1-201ENST00000628177 80 ntBASIC-0.04□□□□□ -2.42
PKP4Q99569 MIR655-201ENST00000362159 97 ntBASIC-0.05□□□□□ -2.42
PKP4Q99569 SNORD115-23-201ENST00000364461 82 ntBASIC-0.05□□□□□ -2.42
PKP4Q99569 RNU6-1133P-201ENST00000410963 100 ntBASIC-0.05□□□□□ -2.42
PKP4Q99569 RNU6-539P-201ENST00000516665 103 ntBASIC-0.05□□□□□ -2.42
PKP4Q99569 RNU6-973P-201ENST00000364690 107 ntBASIC-0.06□□□□□ -2.42
PKP4Q99569 Y_RNA.443-201ENST00000384135 111 ntBASIC-0.06□□□□□ -2.42
PKP4Q99569 MIR517B-201ENST00000385102 67 ntBASIC-0.06□□□□□ -2.42
PKP4Q99569 RNU6-518P-201ENST00000516056 96 ntBASIC-0.06□□□□□ -2.42
PKP4Q99569 RNU7-154P-201ENST00000516194 62 ntBASIC-0.06□□□□□ -2.42
PKP4Q99569 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC-0.06□□□□□ -2.42
PKP4Q99569 AL391099.1-201ENST00000624635 187 ntBASIC-0.06□□□□□ -2.42
PKP4Q99569 Y_RNA.374-201ENST00000365606 101 ntBASIC-0.07□□□□□ -2.42
PKP4Q99569 Y_RNA.375-201ENST00000365625 101 ntBASIC-0.07□□□□□ -2.42
PKP4Q99569 RNU6-630P-201ENST00000391258 106 ntBASIC-0.07□□□□□ -2.42
PKP4Q99569 AC114801.3-201ENST00000510231 177 ntBASIC-0.07□□□□□ -2.42
PKP4Q99569 RNU7-174P-201ENST00000516248 59 ntBASIC-0.07□□□□□ -2.42
PKP4Q99569 MIR4432-201ENST00000581823 84 ntBASIC-0.07□□□□□ -2.42
PKP4Q99569 uc_338.36-201ENST00000622331 158 ntBASIC-0.07□□□□□ -2.42
PKP4Q99569 U6.111-201ENST00000636093 83 ntBASIC-0.07□□□□□ -2.42
PKP4Q99569 SNORA18.1-201ENST00000363418 128 ntBASIC-0.08□□□□□ -2.42
PKP4Q99569 RNU6-901P-201ENST00000384593 106 ntBASIC-0.08□□□□□ -2.42
PKP4Q99569 MIR519A2-201ENST00000384990 87 ntBASIC-0.08□□□□□ -2.42
PKP4Q99569 SNORA25.4-201ENST00000363666 124 ntBASIC-0.09□□□□□ -2.42
Retrieved 100 of 98,524 protein–RNA pairs in 320.5 ms