Protein–RNA interactions for Protein: Q96PV0

SYNGAP1, Ras/Rap GTPase-activating protein SynGAP, humanhuman

Predictions only

Length 1,343 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1Q96PV0 RNU7-129P-201ENST00000516128 62 ntBASIC0.85□□□□□ -2.27
SYNGAP1Q96PV0 U7.6-201ENST00000610841 64 ntBASIC0.85□□□□□ -2.27
SYNGAP1Q96PV0 MIR6866-201ENST00000638146 69 ntBASIC0.85□□□□□ -2.27
SYNGAP1Q96PV0 MIR508-201ENST00000384857 115 ntBASIC0.84□□□□□ -2.28
SYNGAP1Q96PV0 Y_RNA.125-201ENST00000363371 111 ntBASIC0.83□□□□□ -2.28
SYNGAP1Q96PV0 RNA5SP215-201ENST00000363440 122 ntBASIC0.83□□□□□ -2.28
SYNGAP1Q96PV0 RNA5SP67-201ENST00000516422 131 ntBASIC0.83□□□□□ -2.28
SYNGAP1Q96PV0 MIR20A-201ENST00000362279 71 ntBASIC0.82□□□□□ -2.28
SYNGAP1Q96PV0 MIR630-201ENST00000384957 97 ntBASIC0.82□□□□□ -2.28
SYNGAP1Q96PV0 MIR1468-201ENST00000410600 86 ntBASIC0.82□□□□□ -2.28
SYNGAP1Q96PV0 RNU6-1232P-201ENST00000516299 86 ntBASIC0.82□□□□□ -2.28
SYNGAP1Q96PV0 RNU1-29P-201ENST00000606574 126 ntBASIC0.82□□□□□ -2.28
SYNGAP1Q96PV0 RNU6-302P-201ENST00000365249 107 ntBASIC0.81□□□□□ -2.28
SYNGAP1Q96PV0 MIR146A-201ENST00000385201 99 ntBASIC0.81□□□□□ -2.28
SYNGAP1Q96PV0 MIR760-201ENST00000390220 80 ntBASIC0.81□□□□□ -2.28
SYNGAP1Q96PV0 AC023932.2-201ENST00000603176 175 ntBASIC0.81□□□□□ -2.28
SYNGAP1Q96PV0 TRAJ9-201ENST00000390528 61 ntAPPRIS P1 BASIC0.8□□□□□ -2.28
SYNGAP1Q96PV0 RNA5SP266-201ENST00000410273 108 ntBASIC0.8□□□□□ -2.28
SYNGAP1Q96PV0 SNORD114-29-201ENST00000364819 70 ntBASIC0.79□□□□□ -2.28
SYNGAP1Q96PV0 Y_RNA.457-201ENST00000384237 111 ntBASIC0.79□□□□□ -2.28
SYNGAP1Q96PV0 MIR517B-201ENST00000385102 67 ntBASIC0.79□□□□□ -2.28
SYNGAP1Q96PV0 RNU6-758P-201ENST00000516292 89 ntBASIC0.79□□□□□ -2.28
SYNGAP1Q96PV0 RNU7-188P-201ENST00000517063 64 ntBASIC0.79□□□□□ -2.28
SYNGAP1Q96PV0 AC243829.6-201ENST00000612652 106 ntBASIC0.79□□□□□ -2.28
SYNGAP1Q96PV0 AC084368.1-201ENST00000620935 65 ntBASIC0.79□□□□□ -2.28
SYNGAP1Q96PV0 RNA5SP192-201ENST00000364404 120 ntBASIC0.78□□□□□ -2.28
SYNGAP1Q96PV0 AC110620.1-201ENST00000416042 228 ntBASIC0.78□□□□□ -2.28
SYNGAP1Q96PV0 AC244090.1-201ENST00000441884 93 ntBASIC0.78□□□□□ -2.28
SYNGAP1Q96PV0 Y_RNA.633-201ENST00000459107 95 ntBASIC0.78□□□□□ -2.28
SYNGAP1Q96PV0 SNORA25.5-201ENST00000363782 126 ntBASIC0.77□□□□□ -2.29
SYNGAP1Q96PV0 SCARNA21.1-201ENST00000515996 128 ntBASIC0.77□□□□□ -2.29
SYNGAP1Q96PV0 MIR4802-201ENST00000581881 80 ntBASIC0.77□□□□□ -2.29
SYNGAP1Q96PV0 MIR499B-201ENST00000636498 73 ntBASIC0.76□□□□□ -2.29
SYNGAP1Q96PV0 RNU6-945P-201ENST00000383947 107 ntBASIC0.75□□□□□ -2.29
SYNGAP1Q96PV0 CYP3A54P-201ENST00000566950 75 ntBASIC0.75□□□□□ -2.29
SYNGAP1Q96PV0 U2.7-201ENST00000619197 100 ntBASIC0.75□□□□□ -2.29
SYNGAP1Q96PV0 MIR6755-201ENST00000619993 66 ntBASIC0.75□□□□□ -2.29
SYNGAP1Q96PV0 SNORD113-2-201ENST00000391082 72 ntBASIC0.74□□□□□ -2.29
SYNGAP1Q96PV0 MIR4514-201ENST00000581410 57 ntBASIC0.74□□□□□ -2.29
SYNGAP1Q96PV0 MIR5087-201ENST00000635826 76 ntBASIC0.74□□□□□ -2.29
SYNGAP1Q96PV0 RNA5SP98-201ENST00000363158 137 ntBASIC0.73□□□□□ -2.29
SYNGAP1Q96PV0 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.73□□□□□ -2.29
SYNGAP1Q96PV0 RNU6ATAC11P-201ENST00000408541 125 ntBASIC0.73□□□□□ -2.29
SYNGAP1Q96PV0 MIR466-201ENST00000580653 84 ntBASIC0.73□□□□□ -2.29
SYNGAP1Q96PV0 MIR4677-201ENST00000584153 80 ntBASIC0.73□□□□□ -2.29
SYNGAP1Q96PV0 RNA5SP368-201ENST00000364298 116 ntBASIC0.72□□□□□ -2.29
SYNGAP1Q96PV0 RNU6-499P-201ENST00000365615 107 ntBASIC0.72□□□□□ -2.29
SYNGAP1Q96PV0 MIR633-201ENST00000384821 98 ntBASIC0.72□□□□□ -2.29
SYNGAP1Q96PV0 MIR501-201ENST00000390204 84 ntBASIC0.72□□□□□ -2.29
SYNGAP1Q96PV0 RNU6-92P-201ENST00000605893 104 ntBASIC0.72□□□□□ -2.29
SYNGAP1Q96PV0 MTND4LP19-201ENST00000403051 166 ntBASIC0.71□□□□□ -2.3
SYNGAP1Q96PV0 RNU6-940P-201ENST00000363433 104 ntBASIC0.7□□□□□ -2.3
SYNGAP1Q96PV0 RNA5SP128-201ENST00000365305 116 ntBASIC0.7□□□□□ -2.3
SYNGAP1Q96PV0 RNU6-1036P-201ENST00000383959 104 ntBASIC0.7□□□□□ -2.3
SYNGAP1Q96PV0 MIR1255B2-201ENST00000408618 67 ntBASIC0.7□□□□□ -2.3
SYNGAP1Q96PV0 SNORD57-201ENST00000448188 72 ntBASIC0.7□□□□□ -2.3
SYNGAP1Q96PV0 SNORD2-201ENST00000459163 69 ntBASIC0.7□□□□□ -2.3
SYNGAP1Q96PV0 RNU6-698P-201ENST00000363523 107 ntBASIC0.69□□□□□ -2.3
SYNGAP1Q96PV0 RNU6-34P-201ENST00000364874 107 ntBASIC0.69□□□□□ -2.3
SYNGAP1Q96PV0 SNORA75.1-201ENST00000391130 148 ntBASIC0.69□□□□□ -2.3
SYNGAP1Q96PV0 RNU6-518P-201ENST00000516056 96 ntBASIC0.69□□□□□ -2.3
SYNGAP1Q96PV0 RNU7-174P-201ENST00000516248 59 ntBASIC0.69□□□□□ -2.3
SYNGAP1Q96PV0 AC090617.8-201ENST00000623339 167 ntBASIC0.69□□□□□ -2.3
SYNGAP1Q96PV0 SAMD9-203ENST00000620985 6754 ntAPPRIS P1 TSL 2 BASIC0.69□□□□□ -2.3
SYNGAP1Q96PV0 RNA5SP499-201ENST00000363982 119 ntBASIC0.68□□□□□ -2.3
SYNGAP1Q96PV0 SNX3P1X-201ENST00000414887 175 ntBASIC0.68□□□□□ -2.3
SYNGAP1Q96PV0 AC104692.1-201ENST00000472406 90 ntBASIC0.68□□□□□ -2.3
SYNGAP1Q96PV0 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
SYNGAP1Q96PV0 RNU6-1079P-201ENST00000362861 110 ntBASIC0.66□□□□□ -2.3
SYNGAP1Q96PV0 Y_RNA.246-201ENST00000364495 108 ntBASIC0.66□□□□□ -2.3
SYNGAP1Q96PV0 IGLVI-20-201ENST00000519296 130 ntBASIC0.66□□□□□ -2.3
SYNGAP1Q96PV0 SNORD44.1-201ENST00000363202 61 ntBASIC0.65□□□□□ -2.3
SYNGAP1Q96PV0 RNU6-175P-201ENST00000516896 107 ntBASIC0.65□□□□□ -2.3
SYNGAP1Q96PV0 MIR548AD-201ENST00000584780 82 ntBASIC0.65□□□□□ -2.3
SYNGAP1Q96PV0 MIR103A1-201ENST00000362165 78 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 AL021921.1-201ENST00000442774 93 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 SNORA68.3-201ENST00000515906 83 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 RNU6-848P-201ENST00000515948 107 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 RNU6-617P-201ENST00000516147 107 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 RNU6-473P-201ENST00000516164 107 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 RNU6-1049P-201ENST00000516414 107 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 SCARNA11.2-201ENST00000517183 154 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 U4.4-201ENST00000620626 117 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 RNU6-669P-201ENST00000365575 107 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 MIR92A1-201ENST00000385233 78 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 MIR3925-201ENST00000584674 77 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 MIR6773-201ENST00000612812 74 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 RN7SL660P-201ENST00000614852 299 ntBASIC0.64□□□□□ -2.31
SYNGAP1Q96PV0 Y_RNA.185-201ENST00000363894 100 ntBASIC0.63□□□□□ -2.31
SYNGAP1Q96PV0 Y_RNA.325-201ENST00000365171 122 ntBASIC0.63□□□□□ -2.31
SYNGAP1Q96PV0 RNU6-863P-201ENST00000515989 104 ntBASIC0.63□□□□□ -2.31
SYNGAP1Q96PV0 AP000676.1-201ENST00000533307 52 ntBASIC0.63□□□□□ -2.31
SYNGAP1Q96PV0 SNORD60.1-201ENST00000362451 73 ntBASIC0.62□□□□□ -2.31
SYNGAP1Q96PV0 SNORA49-201ENST00000386157 136 ntBASIC0.61□□□□□ -2.31
SYNGAP1Q96PV0 RNU6-1246P-201ENST00000391064 107 ntBASIC0.61□□□□□ -2.31
SYNGAP1Q96PV0 Y_RNA.610-201ENST00000410681 103 ntBASIC0.61□□□□□ -2.31
SYNGAP1Q96PV0 RNU6-782P-201ENST00000516852 104 ntBASIC0.61□□□□□ -2.31
SYNGAP1Q96PV0 SNORD115-25-201ENST00000362619 82 ntBASIC0.6□□□□□ -2.31
SYNGAP1Q96PV0 MIR519A2-201ENST00000384990 87 ntBASIC0.6□□□□□ -2.31
SYNGAP1Q96PV0 MIR527-201ENST00000385244 85 ntBASIC0.6□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 345.8 ms