Protein–RNA interactions for Protein: Q96HJ5

MS4A3, Membrane-spanning 4-domains subfamily A member 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MS4A3Q96HJ5 RNA5SP404-201ENST00000517118 132 ntBASIC1.55□□□□□ -2.16
MS4A3Q96HJ5 MIR6715A-201ENST00000615929 79 ntBASIC1.55□□□□□ -2.16
MS4A3Q96HJ5 AL391099.1-201ENST00000624635 187 ntBASIC1.55□□□□□ -2.16
MS4A3Q96HJ5 RNU6-361P-201ENST00000364454 107 ntBASIC1.54□□□□□ -2.16
MS4A3Q96HJ5 SNORD26-201ENST00000384147 75 ntBASIC1.54□□□□□ -2.16
MS4A3Q96HJ5 MIR504-201ENST00000385065 83 ntBASIC1.54□□□□□ -2.16
MS4A3Q96HJ5 MIR140-201ENST00000385282 100 ntBASIC1.54□□□□□ -2.16
MS4A3Q96HJ5 MIR764-201ENST00000390811 85 ntBASIC1.54□□□□□ -2.16
MS4A3Q96HJ5 SNORA40.8-201ENST00000411034 126 ntBASIC1.54□□□□□ -2.16
MS4A3Q96HJ5 AL353765.1-201ENST00000605514 183 ntBASIC1.54□□□□□ -2.16
MS4A3Q96HJ5 SNORA36.2-201ENST00000384004 127 ntBASIC1.53□□□□□ -2.16
MS4A3Q96HJ5 RNU6-1133P-201ENST00000410963 100 ntBASIC1.53□□□□□ -2.16
MS4A3Q96HJ5 RNY1P9-201ENST00000532431 109 ntBASIC1.53□□□□□ -2.16
MS4A3Q96HJ5 MIR7843-201ENST00000622274 79 ntBASIC1.53□□□□□ -2.16
MS4A3Q96HJ5 RNU6-300P-201ENST00000459080 104 ntBASIC1.51□□□□□ -2.17
MS4A3Q96HJ5 MIR3925-201ENST00000584674 77 ntBASIC1.51□□□□□ -2.17
MS4A3Q96HJ5 RNU6-997P-201ENST00000384725 107 ntBASIC1.5□□□□□ -2.17
MS4A3Q96HJ5 MIR760-201ENST00000390220 80 ntBASIC1.5□□□□□ -2.17
MS4A3Q96HJ5 SNORD71-201ENST00000411292 86 ntBASIC1.5□□□□□ -2.17
MS4A3Q96HJ5 AC104984.5-201ENST00000586878 94 ntBASIC1.5□□□□□ -2.17
MS4A3Q96HJ5 MIR6755-201ENST00000619993 66 ntBASIC1.5□□□□□ -2.17
MS4A3Q96HJ5 RNA5SP98-201ENST00000363158 137 ntBASIC1.49□□□□□ -2.17
MS4A3Q96HJ5 RNU6-973P-201ENST00000364690 107 ntBASIC1.49□□□□□ -2.17
MS4A3Q96HJ5 MIR548Q-201ENST00000408404 100 ntBASIC1.49□□□□□ -2.17
MS4A3Q96HJ5 RNU4-62P-201ENST00000410125 130 ntBASIC1.49□□□□□ -2.17
MS4A3Q96HJ5 SNORA25.15-201ENST00000516487 89 ntBASIC1.49□□□□□ -2.17
MS4A3Q96HJ5 ZNF518A-210ENST00000624776 7994 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
MS4A3Q96HJ5 MIR520D-201ENST00000385002 87 ntBASIC1.48□□□□□ -2.17
MS4A3Q96HJ5 RNU7-55P-201ENST00000459426 62 ntBASIC1.47□□□□□ -2.17
MS4A3Q96HJ5 RNU6-176P-201ENST00000517196 105 ntBASIC1.47□□□□□ -2.17
MS4A3Q96HJ5 uc_338.36-201ENST00000622331 158 ntBASIC1.47□□□□□ -2.17
MS4A3Q96HJ5 snoU13.23-201ENST00000458863 104 ntBASIC1.46□□□□□ -2.18
MS4A3Q96HJ5 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.46□□□□□ -2.18
MS4A3Q96HJ5 RNA5SP190-201ENST00000365222 118 ntBASIC1.45□□□□□ -2.18
MS4A3Q96HJ5 RNA5SP128-201ENST00000365305 116 ntBASIC1.45□□□□□ -2.18
MS4A3Q96HJ5 SNORD13-201ENST00000459299 104 ntBASIC1.45□□□□□ -2.18
MS4A3Q96HJ5 RNA5SP169-201ENST00000517268 117 ntBASIC1.45□□□□□ -2.18
MS4A3Q96HJ5 MIR502-201ENST00000606349 86 ntBASIC1.45□□□□□ -2.18
MS4A3Q96HJ5 MIR4303-201ENST00000581299 66 ntBASIC1.44□□□□□ -2.18
MS4A3Q96HJ5 RNU1-17P-201ENST00000363022 152 ntBASIC1.43□□□□□ -2.18
MS4A3Q96HJ5 RNA5SP99-201ENST00000364020 114 ntBASIC1.43□□□□□ -2.18
MS4A3Q96HJ5 AC096531.1-201ENST00000419107 107 ntBASIC1.43□□□□□ -2.18
MS4A3Q96HJ5 MIR4524B-201ENST00000581569 115 ntBASIC1.43□□□□□ -2.18
MS4A3Q96HJ5 MIR518A1-201ENST00000385068 85 ntBASIC1.42□□□□□ -2.18
MS4A3Q96HJ5 5S_rRNA.2-201ENST00000391293 112 ntBASIC1.42□□□□□ -2.18
MS4A3Q96HJ5 MIR202-201ENST00000362219 110 ntBASIC1.41□□□□□ -2.18
MS4A3Q96HJ5 SNORA17.4-201ENST00000391287 132 ntBASIC1.41□□□□□ -2.18
MS4A3Q96HJ5 SCARNA11.2-201ENST00000517183 154 ntBASIC1.41□□□□□ -2.18
MS4A3Q96HJ5 ZGRF1-208ENST00000505019 6652 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.18
MS4A3Q96HJ5 AL353997.5-201ENST00000618886 171 ntBASIC1.4□□□□□ -2.19
MS4A3Q96HJ5 FAM135A-203ENST00000370479 5930 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
MS4A3Q96HJ5 MIR320A-201ENST00000385302 82 ntBASIC1.39□□□□□ -2.19
MS4A3Q96HJ5 SNORD19-201ENST00000391191 68 ntBASIC1.39□□□□□ -2.19
MS4A3Q96HJ5 RPS29P23-201ENST00000458635 123 ntBASIC1.39□□□□□ -2.19
MS4A3Q96HJ5 RNU4-54P-201ENST00000516428 129 ntBASIC1.39□□□□□ -2.19
MS4A3Q96HJ5 MIR4255-201ENST00000579351 72 ntBASIC1.39□□□□□ -2.19
MS4A3Q96HJ5 MIR3124-201ENST00000582636 67 ntBASIC1.39□□□□□ -2.19
MS4A3Q96HJ5 RNU6-1233P-201ENST00000362922 102 ntBASIC1.38□□□□□ -2.19
MS4A3Q96HJ5 AL590095.2-201ENST00000604136 117 ntBASIC1.38□□□□□ -2.19
MS4A3Q96HJ5 RNU6-900P-201ENST00000384498 102 ntBASIC1.37□□□□□ -2.19
MS4A3Q96HJ5 MIR1323-201ENST00000408090 73 ntBASIC1.37□□□□□ -2.19
MS4A3Q96HJ5 RNA5SP247-201ENST00000411181 105 ntBASIC1.37□□□□□ -2.19
MS4A3Q96HJ5 MIR26B-201ENST00000362251 77 ntBASIC1.36□□□□□ -2.19
MS4A3Q96HJ5 MIR4769-201ENST00000584126 77 ntBASIC1.36□□□□□ -2.19
MS4A3Q96HJ5 BX248123.2-201ENST00000606318 124 ntBASIC1.36□□□□□ -2.19
MS4A3Q96HJ5 MIR499B-201ENST00000636498 73 ntBASIC1.36□□□□□ -2.19
MS4A3Q96HJ5 JMJD1C-212ENST00000639129 7901 ntAPPRIS ALT2 TSL 5 BASIC1.36□□□□□ -2.19
MS4A3Q96HJ5 CEP290-201ENST00000309041 7616 ntAPPRIS ALT1 TSL 5 BASIC1.35□□□□□ -2.19
MS4A3Q96HJ5 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC1.34□□□□□ -2.19
MS4A3Q96HJ5 RNY3P8-201ENST00000411366 126 ntBASIC1.34□□□□□ -2.19
MS4A3Q96HJ5 AC108740.1-201ENST00000498629 225 ntBASIC1.34□□□□□ -2.19
MS4A3Q96HJ5 RNU7-129P-201ENST00000516128 62 ntBASIC1.34□□□□□ -2.19
MS4A3Q96HJ5 RNA5SP61-201ENST00000516453 100 ntBASIC1.34□□□□□ -2.19
MS4A3Q96HJ5 SNORD53B-201ENST00000577887 78 ntBASIC1.34□□□□□ -2.19
MS4A3Q96HJ5 SNORA42.1-201ENST00000363515 137 ntBASIC1.33□□□□□ -2.2
MS4A3Q96HJ5 RNU1-42P-201ENST00000364033 160 ntBASIC1.33□□□□□ -2.2
MS4A3Q96HJ5 MIR1304-201ENST00000408243 91 ntBASIC1.32□□□□□ -2.2
MS4A3Q96HJ5 RNU6-955P-201ENST00000410497 104 ntBASIC1.32□□□□□ -2.2
MS4A3Q96HJ5 MIR4661-201ENST00000582720 75 ntBASIC1.32□□□□□ -2.2
MS4A3Q96HJ5 MIR7974-201ENST00000615835 79 ntBASIC1.32□□□□□ -2.2
MS4A3Q96HJ5 SNORA67.6-201ENST00000391093 99 ntBASIC1.31□□□□□ -2.2
MS4A3Q96HJ5 AC108667.1-201ENST00000428618 249 ntBASIC1.31□□□□□ -2.2
MS4A3Q96HJ5 RNU6-863P-201ENST00000515989 104 ntBASIC1.31□□□□□ -2.2
MS4A3Q96HJ5 CALCRL-202ENST00000409998 5223 ntAPPRIS P1 TSL 5 BASIC1.31□□□□□ -2.2
MS4A3Q96HJ5 SNORA67.5-201ENST00000391036 107 ntBASIC1.3□□□□□ -2.2
MS4A3Q96HJ5 MIR124-2-201ENST00000385081 109 ntBASIC1.29□□□□□ -2.2
MS4A3Q96HJ5 MIR5704-201ENST00000584029 77 ntBASIC1.29□□□□□ -2.2
MS4A3Q96HJ5 MIR6854-201ENST00000614935 69 ntBASIC1.29□□□□□ -2.2
MS4A3Q96HJ5 RNA5SP325-201ENST00000363756 130 ntBASIC1.28□□□□□ -2.2
MS4A3Q96HJ5 SNORA31.24-201ENST00000517232 57 ntBASIC1.28□□□□□ -2.2
MS4A3Q96HJ5 uc_338.17-201ENST00000619633 179 ntBASIC1.28□□□□□ -2.2
MS4A3Q96HJ5 SNORD60-201ENST00000383903 83 ntBASIC1.26□□□□□ -2.21
MS4A3Q96HJ5 MIR150-201ENST00000385048 84 ntBASIC1.26□□□□□ -2.21
MS4A3Q96HJ5 RNU6-237P-201ENST00000515985 71 ntBASIC1.26□□□□□ -2.21
MS4A3Q96HJ5 MIR8068-201ENST00000618032 68 ntBASIC1.26□□□□□ -2.21
MS4A3Q96HJ5 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.25□□□□□ -2.21
MS4A3Q96HJ5 RNU6-455P-201ENST00000384681 107 ntBASIC1.24□□□□□ -2.21
MS4A3Q96HJ5 MIR608-201ENST00000384820 100 ntBASIC1.24□□□□□ -2.21
MS4A3Q96HJ5 RNA5SP458-201ENST00000516188 119 ntBASIC1.24□□□□□ -2.21
MS4A3Q96HJ5 RNU6-608P-201ENST00000383927 104 ntBASIC1.23□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 175.9 ms