Protein–RNA interactions for Protein: Q96A99

PTX4, Pentraxin-4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4Q96A99 MIR519A2-201ENST00000384990 87 ntBASIC-1.3□□□□□ -2.62
PTX4Q96A99 SNX3P1X-201ENST00000414887 175 ntBASIC-1.3□□□□□ -2.62
PTX4Q96A99 U7.3-201ENST00000616123 62 ntBASIC-1.3□□□□□ -2.62
PTX4Q96A99 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.31□□□□□ -2.62
PTX4Q96A99 SNORA26.4-201ENST00000391188 123 ntBASIC-1.31□□□□□ -2.62
PTX4Q96A99 RNU6-109P-201ENST00000516364 107 ntBASIC-1.31□□□□□ -2.62
PTX4Q96A99 RNU6-184P-201ENST00000516514 107 ntBASIC-1.31□□□□□ -2.62
PTX4Q96A99 RNU6-794P-201ENST00000517261 64 ntBASIC-1.31□□□□□ -2.62
PTX4Q96A99 Y_RNA.93-201ENST00000363066 109 ntBASIC-1.32□□□□□ -2.62
PTX4Q96A99 SNORD115-33-201ENST00000363723 82 ntBASIC-1.32□□□□□ -2.62
PTX4Q96A99 RNU6-340P-201ENST00000364005 107 ntBASIC-1.32□□□□□ -2.62
PTX4Q96A99 RNU6-746P-201ENST00000384112 109 ntBASIC-1.32□□□□□ -2.62
PTX4Q96A99 RNU6-518P-201ENST00000516056 96 ntBASIC-1.32□□□□□ -2.62
PTX4Q96A99 SNORD63.1-201ENST00000516178 80 ntBASIC-1.32□□□□□ -2.62
PTX4Q96A99 RNU6-706P-201ENST00000517229 104 ntBASIC-1.32□□□□□ -2.62
PTX4Q96A99 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
PTX4Q96A99 MIR198-201ENST00000637333 62 ntBASIC-1.32□□□□□ -2.62
PTX4Q96A99 RNU6-554P-201ENST00000410466 106 ntBASIC-1.33□□□□□ -2.62
PTX4Q96A99 Y_RNA.818-201ENST00000618813 71 ntBASIC-1.33□□□□□ -2.62
PTX4Q96A99 SNORD115-27-201ENST00000364430 82 ntBASIC-1.34□□□□□ -2.62
PTX4Q96A99 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.34□□□□□ -2.62
PTX4Q96A99 RNU6-106P-201ENST00000384405 107 ntBASIC-1.34□□□□□ -2.62
PTX4Q96A99 snosnR66.1-201ENST00000391095 99 ntBASIC-1.34□□□□□ -2.62
PTX4Q96A99 RNU6-1233P-201ENST00000362922 102 ntBASIC-1.35□□□□□ -2.63
PTX4Q96A99 Y_RNA.261-201ENST00000364631 102 ntBASIC-1.35□□□□□ -2.63
PTX4Q96A99 Y_RNA.613-201ENST00000410726 97 ntBASIC-1.35□□□□□ -2.63
PTX4Q96A99 AL021921.1-201ENST00000442774 93 ntBASIC-1.35□□□□□ -2.63
PTX4Q96A99 RNU7-134P-201ENST00000458997 64 ntBASIC-1.35□□□□□ -2.63
PTX4Q96A99 AC132825.6-201ENST00000638861 357 ntBASIC-1.35□□□□□ -2.63
PTX4Q96A99 RNU6-681P-201ENST00000364012 104 ntBASIC-1.36□□□□□ -2.63
PTX4Q96A99 Y_RNA.703-201ENST00000516846 111 ntBASIC-1.36□□□□□ -2.63
PTX4Q96A99 MIR3133-201ENST00000583157 78 ntBASIC-1.36□□□□□ -2.63
PTX4Q96A99 AC138207.3-201ENST00000585289 166 ntBASIC-1.36□□□□□ -2.63
PTX4Q96A99 FAS-AS1.1-201ENST00000615327 126 ntBASIC-1.36□□□□□ -2.63
PTX4Q96A99 RNU6-704P-201ENST00000364162 103 ntBASIC-1.37□□□□□ -2.63
PTX4Q96A99 SNORA19-201ENST00000384737 128 ntBASIC-1.37□□□□□ -2.63
PTX4Q96A99 MIR519C-201ENST00000385053 87 ntBASIC-1.37□□□□□ -2.63
PTX4Q96A99 SNORD77.2-201ENST00000391045 68 ntBASIC-1.37□□□□□ -2.63
PTX4Q96A99 AL035461.1-201ENST00000421490 332 ntBASIC-1.37□□□□□ -2.63
PTX4Q96A99 RNU6-479P-201ENST00000516348 105 ntBASIC-1.37□□□□□ -2.63
PTX4Q96A99 SNORD115-22-201ENST00000364456 82 ntBASIC-1.38□□□□□ -2.63
PTX4Q96A99 MIR601-201ENST00000385256 79 ntBASIC-1.38□□□□□ -2.63
PTX4Q96A99 MIR8485-201ENST00000401372 91 ntBASIC-1.38□□□□□ -2.63
PTX4Q96A99 MIR29B1-201ENST00000385015 81 ntBASIC-1.39□□□□□ -2.63
PTX4Q96A99 MIR1468-201ENST00000410600 86 ntBASIC-1.39□□□□□ -2.63
PTX4Q96A99 RNU6-656P-201ENST00000516785 107 ntBASIC-1.39□□□□□ -2.63
PTX4Q96A99 RNU6-959P-201ENST00000384671 107 ntBASIC-1.4□□□□□ -2.63
PTX4Q96A99 RNU6-1064P-201ENST00000410626 104 ntBASIC-1.4□□□□□ -2.63
PTX4Q96A99 AL353691.2-201ENST00000443795 59 ntBASIC-1.4□□□□□ -2.63
PTX4Q96A99 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.41□□□□□ -2.64
PTX4Q96A99 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.41□□□□□ -2.64
PTX4Q96A99 AC008267.6-201ENST00000441664 139 ntBASIC-1.41□□□□□ -2.64
PTX4Q96A99 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.41□□□□□ -2.64
PTX4Q96A99 MIR548AG1-201ENST00000579932 66 ntBASIC-1.41□□□□□ -2.64
PTX4Q96A99 MIR6818-201ENST00000621576 65 ntBASIC-1.41□□□□□ -2.64
PTX4Q96A99 RNU6-774P-201ENST00000363238 107 ntBASIC-1.42□□□□□ -2.64
PTX4Q96A99 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.42□□□□□ -2.64
PTX4Q96A99 RNU6-209P-201ENST00000384118 107 ntBASIC-1.42□□□□□ -2.64
PTX4Q96A99 HLA-S-202ENST00000425174 53 ntBASIC-1.42□□□□□ -2.64
PTX4Q96A99 MTATP8P2-201ENST00000435212 202 ntBASIC-1.42□□□□□ -2.64
PTX4Q96A99 RNA5SP461-201ENST00000516451 104 ntBASIC-1.42□□□□□ -2.64
PTX4Q96A99 RNU6-1238P-201ENST00000517215 102 ntBASIC-1.42□□□□□ -2.64
PTX4Q96A99 MIR6129-201ENST00000616087 109 ntBASIC-1.42□□□□□ -2.64
PTX4Q96A99 U2.7-201ENST00000619197 100 ntBASIC-1.42□□□□□ -2.64
PTX4Q96A99 ULK3-223ENST00000631115 126 ntTSL 5 BASIC-1.42□□□□□ -2.64
PTX4Q96A99 RNU6-766P-201ENST00000362478 107 ntBASIC-1.43□□□□□ -2.64
PTX4Q96A99 RNU6-732P-201ENST00000516033 103 ntBASIC-1.43□□□□□ -2.64
PTX4Q96A99 RNU4-61P-201ENST00000411243 107 ntBASIC-1.44□□□□□ -2.64
PTX4Q96A99 AL365222.1-201ENST00000614661 98 ntBASIC-1.44□□□□□ -2.64
PTX4Q96A99 RNU6-633P-201ENST00000362612 103 ntBASIC-1.45□□□□□ -2.64
PTX4Q96A99 SNORD115-37-201ENST00000363768 82 ntBASIC-1.45□□□□□ -2.64
PTX4Q96A99 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.45□□□□□ -2.64
PTX4Q96A99 RNU6-246P-201ENST00000384702 107 ntBASIC-1.45□□□□□ -2.64
PTX4Q96A99 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.45□□□□□ -2.64
PTX4Q96A99 RNU6-807P-201ENST00000516805 107 ntBASIC-1.45□□□□□ -2.64
PTX4Q96A99 RNU6-158P-201ENST00000517104 100 ntBASIC-1.45□□□□□ -2.64
PTX4Q96A99 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.46□□□□□ -2.64
PTX4Q96A99 MIR889-201ENST00000401280 79 ntBASIC-1.46□□□□□ -2.64
PTX4Q96A99 RNU7-88P-201ENST00000458752 63 ntBASIC-1.46□□□□□ -2.64
PTX4Q96A99 RNU6-589P-201ENST00000516485 107 ntBASIC-1.46□□□□□ -2.64
PTX4Q96A99 U7.5-201ENST00000517224 61 ntBASIC-1.46□□□□□ -2.64
PTX4Q96A99 MIR5591-201ENST00000578248 65 ntBASIC-1.46□□□□□ -2.64
PTX4Q96A99 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.46□□□□□ -2.64
PTX4Q96A99 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.46□□□□□ -2.64
PTX4Q96A99 RNU6-645P-201ENST00000364649 106 ntBASIC-1.47□□□□□ -2.64
PTX4Q96A99 MIR507-201ENST00000385234 94 ntBASIC-1.47□□□□□ -2.64
PTX4Q96A99 RNU6-576P-201ENST00000390854 102 ntBASIC-1.47□□□□□ -2.64
PTX4Q96A99 MIR4668-201ENST00000582284 70 ntBASIC-1.47□□□□□ -2.64
PTX4Q96A99 RNA5SP26-201ENST00000362406 119 ntBASIC-1.48□□□□□ -2.65
PTX4Q96A99 RNU6-624P-201ENST00000363411 107 ntBASIC-1.48□□□□□ -2.65
PTX4Q96A99 Y_RNA.348-201ENST00000365403 103 ntBASIC-1.48□□□□□ -2.65
PTX4Q96A99 MIR527-201ENST00000385244 85 ntBASIC-1.48□□□□□ -2.65
PTX4Q96A99 RNU2-51P-201ENST00000410708 197 ntBASIC-1.48□□□□□ -2.65
PTX4Q96A99 RNA5SP180-201ENST00000516181 101 ntBASIC-1.48□□□□□ -2.65
PTX4Q96A99 SNORD19-201ENST00000391191 68 ntBASIC-1.49□□□□□ -2.65
PTX4Q96A99 AC093729.1-201ENST00000513074 128 ntBASIC-1.49□□□□□ -2.65
PTX4Q96A99 AP002795.1-201ENST00000534879 84 ntBASIC-1.49□□□□□ -2.65
PTX4Q96A99 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.5□□□□□ -2.65
PTX4Q96A99 MIR548C-201ENST00000384815 97 ntBASIC-1.5□□□□□ -2.65
PTX4Q96A99 MIR4520-1-201ENST00000582609 70 ntBASIC-1.5□□□□□ -2.65
Retrieved 100 of 98,524 protein–RNA pairs in 8.2 ms