Protein–RNA interactions for Protein: Q8NDX5

PHC3, Polyhomeotic-like protein 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3Q8NDX5 RN7SL660P-201ENST00000614852 299 ntBASIC0.36□□□□□ -2.35
PHC3Q8NDX5 RNU6-1036P-201ENST00000383959 104 ntBASIC0.35□□□□□ -2.35
PHC3Q8NDX5 RNU6-540P-201ENST00000384622 101 ntBASIC0.35□□□□□ -2.35
PHC3Q8NDX5 MIR1197-201ENST00000408818 88 ntBASIC0.35□□□□□ -2.35
PHC3Q8NDX5 RNU6-656P-201ENST00000516785 107 ntBASIC0.35□□□□□ -2.35
PHC3Q8NDX5 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.35□□□□□ -2.35
PHC3Q8NDX5 AL109933.3-201ENST00000619095 188 ntBASIC0.35□□□□□ -2.35
PHC3Q8NDX5 MIR610-201ENST00000385139 96 ntBASIC0.34□□□□□ -2.36
PHC3Q8NDX5 SNORA33.1-201ENST00000364957 130 ntBASIC0.33□□□□□ -2.36
PHC3Q8NDX5 AC114801.3-201ENST00000510231 177 ntBASIC0.33□□□□□ -2.36
PHC3Q8NDX5 RNU6-539P-201ENST00000516665 103 ntBASIC0.33□□□□□ -2.36
PHC3Q8NDX5 MIR4514-201ENST00000581410 57 ntBASIC0.33□□□□□ -2.36
PHC3Q8NDX5 MIR106A-201ENST00000384870 81 ntBASIC0.32□□□□□ -2.36
PHC3Q8NDX5 SNORA62.5-201ENST00000516634 120 ntBASIC0.32□□□□□ -2.36
PHC3Q8NDX5 SNORD115-25-201ENST00000362619 82 ntBASIC0.3□□□□□ -2.36
PHC3Q8NDX5 MIR4743-201ENST00000584576 69 ntBASIC0.3□□□□□ -2.36
PHC3Q8NDX5 CEP290-203ENST00000547691 5968 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
PHC3Q8NDX5 RNA5SP257-201ENST00000363023 116 ntBASIC0.29□□□□□ -2.36
PHC3Q8NDX5 RNA5SP98-201ENST00000363158 137 ntBASIC0.29□□□□□ -2.36
PHC3Q8NDX5 SNORA49-201ENST00000386157 136 ntBASIC0.29□□□□□ -2.36
PHC3Q8NDX5 MIR6514-201ENST00000622549 70 ntBASIC0.29□□□□□ -2.36
PHC3Q8NDX5 MIR548C-201ENST00000384815 97 ntBASIC0.28□□□□□ -2.36
PHC3Q8NDX5 SNORA42.1-201ENST00000363515 137 ntBASIC0.27□□□□□ -2.37
PHC3Q8NDX5 SNORD116-24-201ENST00000384549 92 ntBASIC0.27□□□□□ -2.37
PHC3Q8NDX5 RNU6-630P-201ENST00000391258 106 ntBASIC0.27□□□□□ -2.37
PHC3Q8NDX5 CR383656.4-201ENST00000546909 122 ntBASIC0.27□□□□□ -2.37
PHC3Q8NDX5 AC104408.1-201ENST00000605241 170 ntBASIC0.27□□□□□ -2.37
PHC3Q8NDX5 U6.111-201ENST00000636093 83 ntBASIC0.27□□□□□ -2.37
PHC3Q8NDX5 RNA5SP163-201ENST00000410304 99 ntBASIC0.26□□□□□ -2.37
PHC3Q8NDX5 RNU6-1089P-201ENST00000516473 104 ntBASIC0.26□□□□□ -2.37
PHC3Q8NDX5 MIR5093-201ENST00000583199 100 ntBASIC0.26□□□□□ -2.37
PHC3Q8NDX5 MIR6773-201ENST00000612812 74 ntBASIC0.26□□□□□ -2.37
PHC3Q8NDX5 RNA5SP214-201ENST00000363378 118 ntBASIC0.25□□□□□ -2.37
PHC3Q8NDX5 Y_RNA.443-201ENST00000384135 111 ntBASIC0.25□□□□□ -2.37
PHC3Q8NDX5 AP000676.1-201ENST00000533307 52 ntBASIC0.25□□□□□ -2.37
PHC3Q8NDX5 MIR148A-201ENST00000362215 68 ntBASIC0.24□□□□□ -2.37
PHC3Q8NDX5 MIR593-201ENST00000384856 100 ntBASIC0.24□□□□□ -2.37
PHC3Q8NDX5 CYP3A54P-201ENST00000566950 75 ntBASIC0.24□□□□□ -2.37
PHC3Q8NDX5 RNA5SP215-201ENST00000363440 122 ntBASIC0.23□□□□□ -2.37
PHC3Q8NDX5 AC023932.2-201ENST00000603176 175 ntBASIC0.23□□□□□ -2.37
PHC3Q8NDX5 SNORA25.4-201ENST00000363666 124 ntBASIC0.22□□□□□ -2.37
PHC3Q8NDX5 RNA5SP63-201ENST00000391225 112 ntBASIC0.22□□□□□ -2.37
PHC3Q8NDX5 MIR548H2-201ENST00000408874 88 ntBASIC0.22□□□□□ -2.37
PHC3Q8NDX5 RNU6-180P-201ENST00000516697 61 ntBASIC0.22□□□□□ -2.37
PHC3Q8NDX5 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.22□□□□□ -2.37
PHC3Q8NDX5 MIR145-201ENST00000384967 88 ntBASIC0.21□□□□□ -2.38
PHC3Q8NDX5 RNU7-159P-201ENST00000459284 62 ntBASIC0.21□□□□□ -2.38
PHC3Q8NDX5 MIR2909-201ENST00000617113 69 ntBASIC0.21□□□□□ -2.38
PHC3Q8NDX5 RNU6-502P-201ENST00000362419 108 ntBASIC0.2□□□□□ -2.38
PHC3Q8NDX5 Y_RNA.68-201ENST00000362881 102 ntBASIC0.2□□□□□ -2.38
PHC3Q8NDX5 RNU6-800P-201ENST00000384473 103 ntBASIC0.19□□□□□ -2.38
PHC3Q8NDX5 RNU6-337P-201ENST00000391243 106 ntBASIC0.19□□□□□ -2.38
PHC3Q8NDX5 U2.7-201ENST00000619197 100 ntBASIC0.19□□□□□ -2.38
PHC3Q8NDX5 SNORD114-9-201ENST00000364370 72 ntBASIC0.18□□□□□ -2.38
PHC3Q8NDX5 RNU6-302P-201ENST00000365249 107 ntBASIC0.18□□□□□ -2.38
PHC3Q8NDX5 MIRLET7B-201ENST00000385140 83 ntBASIC0.18□□□□□ -2.38
PHC3Q8NDX5 RNU6ATAC4P-201ENST00000387446 126 ntBASIC0.18□□□□□ -2.38
PHC3Q8NDX5 MIR1255B2-201ENST00000408618 67 ntBASIC0.18□□□□□ -2.38
PHC3Q8NDX5 AL021921.1-201ENST00000442774 93 ntBASIC0.18□□□□□ -2.38
PHC3Q8NDX5 RNU6-590P-201ENST00000365039 107 ntBASIC0.17□□□□□ -2.38
PHC3Q8NDX5 Y_RNA.375-201ENST00000365625 101 ntBASIC0.17□□□□□ -2.38
PHC3Q8NDX5 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.17□□□□□ -2.38
PHC3Q8NDX5 AC005520.4-201ENST00000604337 90 ntBASIC0.17□□□□□ -2.38
PHC3Q8NDX5 AC090617.8-201ENST00000623339 167 ntBASIC0.17□□□□□ -2.38
PHC3Q8NDX5 MIR517B-201ENST00000385102 67 ntBASIC0.16□□□□□ -2.38
PHC3Q8NDX5 RNA5SP299-201ENST00000391203 116 ntBASIC0.16□□□□□ -2.38
PHC3Q8NDX5 RNU7-165P-201ENST00000458864 60 ntBASIC0.16□□□□□ -2.38
PHC3Q8NDX5 RNU6-542P-201ENST00000516405 103 ntBASIC0.16□□□□□ -2.38
PHC3Q8NDX5 RNA5SP470-201ENST00000516463 106 ntBASIC0.16□□□□□ -2.38
PHC3Q8NDX5 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.16□□□□□ -2.38
PHC3Q8NDX5 SNORD114-5-201ENST00000362928 70 ntBASIC0.15□□□□□ -2.39
PHC3Q8NDX5 MIR6718-201ENST00000616153 80 ntBASIC0.15□□□□□ -2.39
PHC3Q8NDX5 Y_RNA.178-201ENST00000363832 102 ntBASIC0.14□□□□□ -2.39
PHC3Q8NDX5 AC139453.2-201ENST00000487255 133 ntBASIC0.14□□□□□ -2.39
PHC3Q8NDX5 MIR548V-201ENST00000584165 80 ntBASIC0.14□□□□□ -2.39
PHC3Q8NDX5 RNU6-518P-201ENST00000516056 96 ntBASIC0.13□□□□□ -2.39
PHC3Q8NDX5 snoR1.1-201ENST00000628177 80 ntBASIC0.13□□□□□ -2.39
PHC3Q8NDX5 MIR1295A-201ENST00000408463 79 ntBASIC0.12□□□□□ -2.39
PHC3Q8NDX5 RNU6-698P-201ENST00000363523 107 ntBASIC0.11□□□□□ -2.39
PHC3Q8NDX5 RNU6-34P-201ENST00000364874 107 ntBASIC0.11□□□□□ -2.39
PHC3Q8NDX5 RNU7-174P-201ENST00000516248 59 ntBASIC0.11□□□□□ -2.39
PHC3Q8NDX5 RNU6-900P-201ENST00000384498 102 ntBASIC0.1□□□□□ -2.39
PHC3Q8NDX5 RNU6-455P-201ENST00000384681 107 ntBASIC0.1□□□□□ -2.39
PHC3Q8NDX5 MIR6507-201ENST00000613630 70 ntBASIC0.1□□□□□ -2.39
PHC3Q8NDX5 AC103706.3-201ENST00000636297 85 ntBASIC0.1□□□□□ -2.39
PHC3Q8NDX5 SNORD113-2-201ENST00000391082 72 ntBASIC0.09□□□□□ -2.4
PHC3Q8NDX5 RNU6-1133P-201ENST00000410963 100 ntBASIC0.09□□□□□ -2.4
PHC3Q8NDX5 RNU7-154P-201ENST00000516194 62 ntBASIC0.09□□□□□ -2.4
PHC3Q8NDX5 RNA5SP285-201ENST00000516619 119 ntBASIC0.09□□□□□ -2.4
PHC3Q8NDX5 RNU6-46P-201ENST00000383860 107 ntBASIC0.08□□□□□ -2.4
PHC3Q8NDX5 MIR5190-201ENST00000581537 80 ntBASIC0.08□□□□□ -2.4
PHC3Q8NDX5 MIR519A2-201ENST00000384990 87 ntBASIC0.07□□□□□ -2.4
PHC3Q8NDX5 RNU7-55P-201ENST00000459426 62 ntBASIC0.07□□□□□ -2.4
PHC3Q8NDX5 AC104692.1-201ENST00000472406 90 ntBASIC0.07□□□□□ -2.4
PHC3Q8NDX5 MIR4511-201ENST00000582784 87 ntBASIC0.07□□□□□ -2.4
PHC3Q8NDX5 Y_RNA.433-201ENST00000384089 102 ntBASIC0.06□□□□□ -2.4
PHC3Q8NDX5 MIR630-201ENST00000384957 97 ntBASIC0.06□□□□□ -2.4
PHC3Q8NDX5 Y_RNA.246-201ENST00000364495 108 ntBASIC0.05□□□□□ -2.4
PHC3Q8NDX5 Y_RNA.386-201ENST00000383913 105 ntBASIC0.05□□□□□ -2.4
PHC3Q8NDX5 MIR4432-201ENST00000581823 84 ntBASIC0.05□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 206.5 ms