Protein–RNA interactions for Protein: Q86VR2

RETREG3, Reticulophagy regulator 3, humanhuman

Predictions only

Length 466 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3Q86VR2 Y_RNA.379-201ENST00000365653 102 ntBASIC0.95□□□□□ -2.26
RETREG3Q86VR2 RNU4-38P-201ENST00000364472 129 ntBASIC0.94□□□□□ -2.26
RETREG3Q86VR2 MIR3925-201ENST00000584674 77 ntBASIC0.94□□□□□ -2.26
RETREG3Q86VR2 Y_RNA.109-201ENST00000363215 102 ntBASIC0.93□□□□□ -2.26
RETREG3Q86VR2 RNU6-863P-201ENST00000515989 104 ntBASIC0.93□□□□□ -2.26
RETREG3Q86VR2 MIR4452-201ENST00000583004 71 ntBASIC0.93□□□□□ -2.26
RETREG3Q86VR2 MIR876-201ENST00000401147 81 ntBASIC0.92□□□□□ -2.26
RETREG3Q86VR2 LINC01984-201ENST00000583863 301 ntTSL 3 BASIC0.92□□□□□ -2.26
RETREG3Q86VR2 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.92□□□□□ -2.26
RETREG3Q86VR2 SNORD1B-201ENST00000363091 84 ntBASIC0.91□□□□□ -2.26
RETREG3Q86VR2 RNU6-172P-201ENST00000411000 93 ntBASIC0.91□□□□□ -2.26
RETREG3Q86VR2 SNORA40.16-201ENST00000517238 121 ntBASIC0.91□□□□□ -2.26
RETREG3Q86VR2 RNU6-945P-201ENST00000383947 107 ntBASIC0.9□□□□□ -2.27
RETREG3Q86VR2 RNU6-458P-201ENST00000384179 107 ntBASIC0.9□□□□□ -2.27
RETREG3Q86VR2 AP000676.1-201ENST00000533307 52 ntBASIC0.9□□□□□ -2.27
RETREG3Q86VR2 U6.58-201ENST00000613107 107 ntBASIC0.9□□□□□ -2.27
RETREG3Q86VR2 RPL39P28-201ENST00000465655 155 ntBASIC0.89□□□□□ -2.27
RETREG3Q86VR2 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.89□□□□□ -2.27
RETREG3Q86VR2 SCARNA11.2-201ENST00000517183 154 ntBASIC0.89□□□□□ -2.27
RETREG3Q86VR2 MIR6857-201ENST00000613267 93 ntBASIC0.89□□□□□ -2.27
RETREG3Q86VR2 SNORD114-22-201ENST00000365423 72 ntBASIC0.88□□□□□ -2.27
RETREG3Q86VR2 AL353803.5-201ENST00000599815 141 ntBASIC0.88□□□□□ -2.27
RETREG3Q86VR2 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC0.88□□□□□ -2.27
RETREG3Q86VR2 SNORD44.1-201ENST00000363202 61 ntBASIC0.87□□□□□ -2.27
RETREG3Q86VR2 RNU6-753P-201ENST00000363926 107 ntBASIC0.87□□□□□ -2.27
RETREG3Q86VR2 RNU6-810P-201ENST00000364001 107 ntBASIC0.87□□□□□ -2.27
RETREG3Q86VR2 SNORA40B-201ENST00000385573 128 ntBASIC0.87□□□□□ -2.27
RETREG3Q86VR2 RNU4-88P-201ENST00000411220 86 ntBASIC0.87□□□□□ -2.27
RETREG3Q86VR2 RNA5SP220-201ENST00000516298 104 ntBASIC0.87□□□□□ -2.27
RETREG3Q86VR2 SNORD114-27-201ENST00000363766 70 ntBASIC0.86□□□□□ -2.27
RETREG3Q86VR2 RNU6-42P-201ENST00000384165 107 ntBASIC0.85□□□□□ -2.27
RETREG3Q86VR2 MIR106A-201ENST00000384870 81 ntBASIC0.85□□□□□ -2.27
RETREG3Q86VR2 snoU13.18-201ENST00000459483 104 ntBASIC0.85□□□□□ -2.27
RETREG3Q86VR2 snoR1.1-201ENST00000628177 80 ntBASIC0.85□□□□□ -2.27
RETREG3Q86VR2 MIR96-201ENST00000362288 78 ntBASIC0.84□□□□□ -2.27
RETREG3Q86VR2 RNU1-93P-201ENST00000364704 169 ntBASIC0.84□□□□□ -2.27
RETREG3Q86VR2 MIR6734-201ENST00000621166 68 ntBASIC0.84□□□□□ -2.27
RETREG3Q86VR2 RNU6-980P-201ENST00000516925 103 ntBASIC0.83□□□□□ -2.28
RETREG3Q86VR2 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.82□□□□□ -2.28
RETREG3Q86VR2 SNORD115-23-201ENST00000364461 82 ntBASIC0.82□□□□□ -2.28
RETREG3Q86VR2 Y_RNA.355-201ENST00000365462 98 ntBASIC0.82□□□□□ -2.28
RETREG3Q86VR2 MIR532-201ENST00000385025 91 ntBASIC0.82□□□□□ -2.28
RETREG3Q86VR2 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
RETREG3Q86VR2 RNA5SP98-201ENST00000363158 137 ntBASIC0.81□□□□□ -2.28
RETREG3Q86VR2 MIR520E-201ENST00000384867 87 ntBASIC0.81□□□□□ -2.28
RETREG3Q86VR2 TRGJP-201ENST00000390338 61 ntAPPRIS P1 BASIC0.81□□□□□ -2.28
RETREG3Q86VR2 RPS29P1-201ENST00000465274 159 ntBASIC0.81□□□□□ -2.28
RETREG3Q86VR2 Y_RNA.118-201ENST00000363300 101 ntBASIC0.8□□□□□ -2.28
RETREG3Q86VR2 SNORD114-2-201ENST00000363953 78 ntBASIC0.8□□□□□ -2.28
RETREG3Q86VR2 MIR146A-201ENST00000385201 99 ntBASIC0.8□□□□□ -2.28
RETREG3Q86VR2 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.8□□□□□ -2.28
RETREG3Q86VR2 RNU6-351P-201ENST00000516097 100 ntBASIC0.8□□□□□ -2.28
RETREG3Q86VR2 RNU4-33P-201ENST00000364316 85 ntBASIC0.79□□□□□ -2.28
RETREG3Q86VR2 AC108740.1-201ENST00000498629 225 ntBASIC0.79□□□□□ -2.28
RETREG3Q86VR2 SNORA68.3-201ENST00000515906 83 ntBASIC0.79□□□□□ -2.28
RETREG3Q86VR2 MIR6767-201ENST00000637302 66 ntBASIC0.79□□□□□ -2.28
RETREG3Q86VR2 MIR103A1-201ENST00000362165 78 ntBASIC0.78□□□□□ -2.28
RETREG3Q86VR2 RNU6ATAC20P-201ENST00000408436 127 ntBASIC0.78□□□□□ -2.28
RETREG3Q86VR2 MIR4432-201ENST00000581823 84 ntBASIC0.78□□□□□ -2.28
RETREG3Q86VR2 MIR151B-201ENST00000584249 96 ntBASIC0.78□□□□□ -2.28
RETREG3Q86VR2 AC108676.2-201ENST00000605225 163 ntBASIC0.78□□□□□ -2.28
RETREG3Q86VR2 MIR6788-201ENST00000618842 66 ntBASIC0.78□□□□□ -2.28
RETREG3Q86VR2 uc_338.17-201ENST00000619633 179 ntBASIC0.78□□□□□ -2.28
RETREG3Q86VR2 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.77□□□□□ -2.29
RETREG3Q86VR2 RNU6-1223P-201ENST00000517124 104 ntBASIC0.77□□□□□ -2.29
RETREG3Q86VR2 MIR4698-201ENST00000577795 80 ntBASIC0.77□□□□□ -2.29
RETREG3Q86VR2 MIR548X-201ENST00000580069 75 ntBASIC0.77□□□□□ -2.29
RETREG3Q86VR2 RNU6-598P-201ENST00000364017 105 ntBASIC0.76□□□□□ -2.29
RETREG3Q86VR2 RNU6-127P-201ENST00000390897 107 ntBASIC0.76□□□□□ -2.29
RETREG3Q86VR2 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC0.76□□□□□ -2.29
RETREG3Q86VR2 RNA5SP121-201ENST00000516537 101 ntBASIC0.76□□□□□ -2.29
RETREG3Q86VR2 MIR3973-201ENST00000579824 107 ntBASIC0.76□□□□□ -2.29
RETREG3Q86VR2 MIR373-201ENST00000362273 69 ntBASIC0.74□□□□□ -2.29
RETREG3Q86VR2 MIR579-201ENST00000385221 98 ntBASIC0.74□□□□□ -2.29
RETREG3Q86VR2 MIR548J-201ENST00000408833 112 ntBASIC0.74□□□□□ -2.29
RETREG3Q86VR2 MIR4490-201ENST00000582647 84 ntBASIC0.74□□□□□ -2.29
RETREG3Q86VR2 U2.18-201ENST00000622185 84 ntBASIC0.74□□□□□ -2.29
RETREG3Q86VR2 RNU6-1133P-201ENST00000410963 100 ntBASIC0.73□□□□□ -2.29
RETREG3Q86VR2 uc_338.36-201ENST00000622331 158 ntBASIC0.73□□□□□ -2.29
RETREG3Q86VR2 MIRLET7D-201ENST00000362263 87 ntBASIC0.72□□□□□ -2.29
RETREG3Q86VR2 RNU6-815P-201ENST00000384080 113 ntBASIC0.71□□□□□ -2.3
RETREG3Q86VR2 MIR643-201ENST00000385267 97 ntBASIC0.71□□□□□ -2.3
RETREG3Q86VR2 CYP3A137P-201ENST00000562436 69 ntBASIC0.71□□□□□ -2.3
RETREG3Q86VR2 MIR6514-201ENST00000622549 70 ntBASIC0.7□□□□□ -2.3
RETREG3Q86VR2 AL391099.1-201ENST00000624635 187 ntBASIC0.7□□□□□ -2.3
RETREG3Q86VR2 ZNF518A-209ENST00000614149 7911 ntAPPRIS P1 TSL 5 BASIC0.7□□□□□ -2.3
RETREG3Q86VR2 RNA5SP62-201ENST00000363457 110 ntBASIC0.69□□□□□ -2.3
RETREG3Q86VR2 RNU6-35P-201ENST00000384530 107 ntBASIC0.69□□□□□ -2.3
RETREG3Q86VR2 RNU7-160P-201ENST00000516660 62 ntBASIC0.69□□□□□ -2.3
RETREG3Q86VR2 RNU6ATAC22P-201ENST00000516794 89 ntBASIC0.69□□□□□ -2.3
RETREG3Q86VR2 RNU7-151P-201ENST00000516930 53 ntBASIC0.69□□□□□ -2.3
RETREG3Q86VR2 MIR7111-201ENST00000619751 72 ntBASIC0.69□□□□□ -2.3
RETREG3Q86VR2 MIR6866-201ENST00000638146 69 ntBASIC0.69□□□□□ -2.3
RETREG3Q86VR2 Y_RNA.698-201ENST00000516798 118 ntBASIC0.68□□□□□ -2.3
RETREG3Q86VR2 MIR5000-201ENST00000577717 103 ntBASIC0.68□□□□□ -2.3
RETREG3Q86VR2 AC022709.1-201ENST00000615967 87 ntBASIC0.68□□□□□ -2.3
RETREG3Q86VR2 KIF20B-201ENST00000260753 6306 ntAPPRIS P3 TSL 1 (best) BASIC0.68□□□□□ -2.3
RETREG3Q86VR2 SNORA62.4-201ENST00000365504 151 ntBASIC0.67□□□□□ -2.3
RETREG3Q86VR2 RNU6-696P-201ENST00000390834 107 ntBASIC0.67□□□□□ -2.3
RETREG3Q86VR2 RNU6-995P-201ENST00000391244 107 ntBASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 242 ms