Protein–RNA interactions for Protein: Q86TS7

LINC00643, Putative UPF0730 protein encoded by LINC00643, humanhuman

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643Q86TS7 RNY3P16-201ENST00000516338 101 ntBASIC-4.96□□□□□ -3.2
LINC00643Q86TS7 RNU6-1153P-201ENST00000516760 105 ntBASIC-4.96□□□□□ -3.2
LINC00643Q86TS7 MIR3611-201ENST00000584484 83 ntBASIC-4.96□□□□□ -3.2
LINC00643Q86TS7 AL160413.1-201ENST00000622780 310 ntBASIC-4.96□□□□□ -3.2
LINC00643Q86TS7 Y_RNA.134-201ENST00000363435 105 ntBASIC-4.97□□□□□ -3.21
LINC00643Q86TS7 Y_RNA.139-201ENST00000363464 102 ntBASIC-4.97□□□□□ -3.21
LINC00643Q86TS7 SNORA41B-201ENST00000384785 128 ntBASIC-4.98□□□□□ -3.21
LINC00643Q86TS7 MIR1236-201ENST00000408340 102 ntBASIC-4.98□□□□□ -3.21
LINC00643Q86TS7 RNU6-314P-201ENST00000516574 104 ntBASIC-4.98□□□□□ -3.21
LINC00643Q86TS7 Y_RNA.259-201ENST00000364619 101 ntBASIC-4.99□□□□□ -3.21
LINC00643Q86TS7 Y_RNA.307-201ENST00000365022 117 ntBASIC-4.99□□□□□ -3.21
LINC00643Q86TS7 Y_RNA.435-201ENST00000384095 112 ntBASIC-4.99□□□□□ -3.21
LINC00643Q86TS7 RNY4P18-201ENST00000391107 89 ntBASIC-4.99□□□□□ -3.21
LINC00643Q86TS7 RNU6-172P-201ENST00000411000 93 ntBASIC-4.99□□□□□ -3.21
LINC00643Q86TS7 Y_RNA.19-201ENST00000362462 99 ntBASIC-5□□□□□ -3.21
LINC00643Q86TS7 Y_RNA.266-201ENST00000364678 96 ntBASIC-5□□□□□ -3.21
LINC00643Q86TS7 Y_RNA.309-201ENST00000365046 111 ntBASIC-5□□□□□ -3.21
LINC00643Q86TS7 RNU6-982P-201ENST00000516216 102 ntBASIC-5□□□□□ -3.21
LINC00643Q86TS7 Y_RNA.9-201ENST00000362354 101 ntBASIC-5.01□□□□□ -3.21
LINC00643Q86TS7 SNORD77.2-201ENST00000391045 68 ntBASIC-5.01□□□□□ -3.21
LINC00643Q86TS7 RNU6-584P-201ENST00000410350 95 ntBASIC-5.01□□□□□ -3.21
LINC00643Q86TS7 MIR548AJ2-201ENST00000408539 92 ntBASIC-5.02□□□□□ -3.21
LINC00643Q86TS7 AC090582.1-201ENST00000636321 199 ntBASIC-5.02□□□□□ -3.21
LINC00643Q86TS7 RNU6-361P-201ENST00000364454 107 ntBASIC-5.03□□□□□ -3.21
LINC00643Q86TS7 Y_RNA.505-201ENST00000384489 102 ntBASIC-5.03□□□□□ -3.21
LINC00643Q86TS7 SNORD37.2-201ENST00000391075 66 ntBASIC-5.03□□□□□ -3.21
LINC00643Q86TS7 RNA5SP173-201ENST00000364857 136 ntBASIC-5.04□□□□□ -3.22
LINC00643Q86TS7 MIR1252-201ENST00000408861 65 ntBASIC-5.04□□□□□ -3.22
LINC00643Q86TS7 MTND4LP32-201ENST00000636111 270 ntBASIC-5.04□□□□□ -3.22
LINC00643Q86TS7 RNU6-806P-201ENST00000365147 105 ntBASIC-5.05□□□□□ -3.22
LINC00643Q86TS7 Y_RNA.434-201ENST00000384090 100 ntBASIC-5.05□□□□□ -3.22
LINC00643Q86TS7 Y_RNA.612-201ENST00000410717 95 ntBASIC-5.05□□□□□ -3.22
LINC00643Q86TS7 MTND5P22-201ENST00000458380 195 ntBASIC-5.05□□□□□ -3.22
LINC00643Q86TS7 RNU4-11P-201ENST00000365287 132 ntBASIC-5.06□□□□□ -3.22
LINC00643Q86TS7 RNU6-800P-201ENST00000384473 103 ntBASIC-5.06□□□□□ -3.22
LINC00643Q86TS7 MIR1254-1-201ENST00000408257 97 ntBASIC-5.06□□□□□ -3.22
LINC00643Q86TS7 AC130289.1-201ENST00000577321 73 ntBASIC-5.06□□□□□ -3.22
LINC00643Q86TS7 MIR4777-201ENST00000583710 86 ntBASIC-5.06□□□□□ -3.22
LINC00643Q86TS7 RNU6-604P-201ENST00000390917 100 ntBASIC-5.07□□□□□ -3.22
LINC00643Q86TS7 Y_RNA.129-201ENST00000363392 110 ntBASIC-5.08□□□□□ -3.22
LINC00643Q86TS7 RNA5SP215-201ENST00000363440 122 ntBASIC-5.08□□□□□ -3.22
LINC00643Q86TS7 RNU6-129P-201ENST00000391022 107 ntBASIC-5.08□□□□□ -3.22
LINC00643Q86TS7 AC113139.1-201ENST00000605049 239 ntBASIC-5.08□□□□□ -3.22
LINC00643Q86TS7 MIR3658-201ENST00000636291 56 ntBASIC-5.08□□□□□ -3.22
LINC00643Q86TS7 MIR369-201ENST00000362155 70 ntBASIC-5.09□□□□□ -3.22
LINC00643Q86TS7 Y_RNA.264-201ENST00000364665 102 ntBASIC-5.09□□□□□ -3.22
LINC00643Q86TS7 RNU6-506P-201ENST00000516553 94 ntBASIC-5.09□□□□□ -3.22
LINC00643Q86TS7 RNU6-68P-201ENST00000516576 104 ntBASIC-5.09□□□□□ -3.22
LINC00643Q86TS7 SNORD58A-201ENST00000383875 65 ntBASIC-5.1□□□□□ -3.23
LINC00643Q86TS7 SNORD116-29-201ENST00000384516 83 ntBASIC-5.1□□□□□ -3.23
LINC00643Q86TS7 MIR509-1-201ENST00000385265 94 ntBASIC-5.1□□□□□ -3.23
LINC00643Q86TS7 MIR509-2-201ENST00000390724 91 ntBASIC-5.1□□□□□ -3.23
LINC00643Q86TS7 MIR3675-201ENST00000583661 73 ntBASIC-5.1□□□□□ -3.23
LINC00643Q86TS7 Y_RNA.26-201ENST00000362539 101 ntBASIC-5.11□□□□□ -3.23
LINC00643Q86TS7 Y_RNA.292-201ENST00000364904 97 ntBASIC-5.11□□□□□ -3.23
LINC00643Q86TS7 RNU6-639P-201ENST00000384074 107 ntBASIC-5.11□□□□□ -3.23
LINC00643Q86TS7 Y_RNA.566-201ENST00000384735 101 ntBASIC-5.11□□□□□ -3.23
LINC00643Q86TS7 RNU6-1044P-201ENST00000384755 107 ntBASIC-5.11□□□□□ -3.23
LINC00643Q86TS7 MIR513C-201ENST00000401352 84 ntBASIC-5.11□□□□□ -3.23
LINC00643Q86TS7 RNU7-153P-201ENST00000516455 62 ntBASIC-5.11□□□□□ -3.23
LINC00643Q86TS7 Y_RNA.187-201ENST00000363918 113 ntBASIC-5.12□□□□□ -3.23
LINC00643Q86TS7 RNU6-450P-201ENST00000364654 107 ntBASIC-5.12□□□□□ -3.23
LINC00643Q86TS7 RNU6-823P-201ENST00000391042 103 ntBASIC-5.12□□□□□ -3.23
LINC00643Q86TS7 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC-5.12□□□□□ -3.23
LINC00643Q86TS7 hsa-mir-550a-2.1-201ENST00000637473 97 ntBASIC-5.12□□□□□ -3.23
LINC00643Q86TS7 MTND4LP1-201ENST00000446263 157 ntBASIC-5.13□□□□□ -3.23
LINC00643Q86TS7 SNORD127-201ENST00000458892 86 ntBASIC-5.13□□□□□ -3.23
LINC00643Q86TS7 RNU6-1143P-201ENST00000516125 104 ntBASIC-5.13□□□□□ -3.23
LINC00643Q86TS7 RNU6-1121P-201ENST00000516802 109 ntBASIC-5.13□□□□□ -3.23
LINC00643Q86TS7 RNU7-160P-201ENST00000516660 62 ntBASIC-5.14□□□□□ -3.23
LINC00643Q86TS7 Y_RNA.237-201ENST00000364439 102 ntBASIC-5.15□□□□□ -3.23
LINC00643Q86TS7 Y_RNA.718-201ENST00000517110 102 ntBASIC-5.15□□□□□ -3.23
LINC00643Q86TS7 Y_RNA.63-201ENST00000362841 102 ntBASIC-5.16□□□□□ -3.24
LINC00643Q86TS7 Y_RNA.276-201ENST00000364732 109 ntBASIC-5.16□□□□□ -3.24
LINC00643Q86TS7 Y_RNA.511-201ENST00000384514 103 ntBASIC-5.16□□□□□ -3.24
LINC00643Q86TS7 RNU6-972P-201ENST00000391208 107 ntBASIC-5.16□□□□□ -3.24
LINC00643Q86TS7 Y_RNA.609-201ENST00000410669 89 ntBASIC-5.16□□□□□ -3.24
LINC00643Q86TS7 RNU6-795P-201ENST00000516323 103 ntBASIC-5.16□□□□□ -3.24
LINC00643Q86TS7 Y_RNA.705-201ENST00000516862 110 ntBASIC-5.16□□□□□ -3.24
LINC00643Q86TS7 RNU6-345P-201ENST00000517001 107 ntBASIC-5.16□□□□□ -3.24
LINC00643Q86TS7 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC-5.17□□□□□ -3.24
LINC00643Q86TS7 Y_RNA.69-201ENST00000362885 109 ntBASIC-5.18□□□□□ -3.24
LINC00643Q86TS7 Y_RNA.279-201ENST00000364763 95 ntBASIC-5.18□□□□□ -3.24
LINC00643Q86TS7 RNU6-1108P-201ENST00000516308 104 ntBASIC-5.18□□□□□ -3.24
LINC00643Q86TS7 RNU6-781P-201ENST00000516377 101 ntBASIC-5.18□□□□□ -3.24
LINC00643Q86TS7 Y_RNA.29-201ENST00000362570 113 ntBASIC-5.19□□□□□ -3.24
LINC00643Q86TS7 SNORD45.1-201ENST00000363181 77 ntBASIC-5.19□□□□□ -3.24
LINC00643Q86TS7 Y_RNA.645-201ENST00000391229 102 ntBASIC-5.19□□□□□ -3.24
LINC00643Q86TS7 AL359920.1-201ENST00000618332 176 ntBASIC-5.19□□□□□ -3.24
LINC00643Q86TS7 Y_RNA.281-201ENST00000364774 94 ntBASIC-5.2□□□□□ -3.24
LINC00643Q86TS7 SNORA8.1-201ENST00000384250 140 ntBASIC-5.2□□□□□ -3.24
LINC00643Q86TS7 RNU7-152P-201ENST00000458982 64 ntBASIC-5.2□□□□□ -3.24
LINC00643Q86TS7 RNU6-330P-201ENST00000363015 107 ntBASIC-5.21□□□□□ -3.24
LINC00643Q86TS7 RNU6-915P-201ENST00000364943 103 ntBASIC-5.21□□□□□ -3.24
LINC00643Q86TS7 RNU6-554P-201ENST00000410466 106 ntBASIC-5.21□□□□□ -3.24
LINC00643Q86TS7 Y_RNA.688-201ENST00000516565 95 ntBASIC-5.21□□□□□ -3.24
LINC00643Q86TS7 RNU6-668P-201ENST00000364180 107 ntBASIC-5.22□□□□□ -3.25
LINC00643Q86TS7 RNU6-1047P-201ENST00000364418 107 ntBASIC-5.22□□□□□ -3.25
LINC00643Q86TS7 RNU6-887P-201ENST00000410660 100 ntBASIC-5.22□□□□□ -3.25
LINC00643Q86TS7 AL513128.1-201ENST00000422675 469 ntTSL 5 BASIC-5.22□□□□□ -3.25
Retrieved 100 of 98,524 protein–RNA pairs in 175.1 ms