Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 RNU4-54P-201ENST00000516428 129 ntBASIC1.04□□□□□ -2.24
LYSMD3Q7Z3D4 AC103810.9-201ENST00000606688 112 ntBASIC1.04□□□□□ -2.24
LYSMD3Q7Z3D4 RNU6-502P-201ENST00000362419 108 ntBASIC1.03□□□□□ -2.24
LYSMD3Q7Z3D4 RNU6-1036P-201ENST00000383959 104 ntBASIC1.03□□□□□ -2.24
LYSMD3Q7Z3D4 MIR608-201ENST00000384820 100 ntBASIC1.03□□□□□ -2.24
LYSMD3Q7Z3D4 MIR548X-201ENST00000580069 75 ntBASIC1.03□□□□□ -2.24
LYSMD3Q7Z3D4 RPS29P1-201ENST00000465274 159 ntBASIC1.02□□□□□ -2.25
LYSMD3Q7Z3D4 RNU6-782P-201ENST00000516852 104 ntBASIC1.02□□□□□ -2.25
LYSMD3Q7Z3D4 MIR6788-201ENST00000618842 66 ntBASIC1.02□□□□□ -2.25
LYSMD3Q7Z3D4 MIR6755-201ENST00000619993 66 ntBASIC1.02□□□□□ -2.25
LYSMD3Q7Z3D4 RNU4-38P-201ENST00000364472 129 ntBASIC1.01□□□□□ -2.25
LYSMD3Q7Z3D4 MIR518A1-201ENST00000385068 85 ntBASIC1.01□□□□□ -2.25
LYSMD3Q7Z3D4 SNORD71-201ENST00000411292 86 ntBASIC1.01□□□□□ -2.25
LYSMD3Q7Z3D4 RNU6-1223P-201ENST00000517124 104 ntBASIC1.01□□□□□ -2.25
LYSMD3Q7Z3D4 DLEU2_4.2-201ENST00000616613 58 ntBASIC1.01□□□□□ -2.25
LYSMD3Q7Z3D4 AC084368.1-201ENST00000620935 65 ntBASIC1.01□□□□□ -2.25
LYSMD3Q7Z3D4 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1□□□□□ -2.25
LYSMD3Q7Z3D4 MIR429-201ENST00000362106 83 ntBASIC1□□□□□ -2.25
LYSMD3Q7Z3D4 RNU6-458P-201ENST00000384179 107 ntBASIC1□□□□□ -2.25
LYSMD3Q7Z3D4 RNU6ATAC20P-201ENST00000408436 127 ntBASIC1□□□□□ -2.25
LYSMD3Q7Z3D4 OR2A41P-201ENST00000473586 105 ntBASIC1□□□□□ -2.25
LYSMD3Q7Z3D4 MIR151B-201ENST00000584249 96 ntBASIC1□□□□□ -2.25
LYSMD3Q7Z3D4 U6.58-201ENST00000613107 107 ntBASIC1□□□□□ -2.25
LYSMD3Q7Z3D4 AC022709.1-201ENST00000615967 87 ntBASIC1□□□□□ -2.25
LYSMD3Q7Z3D4 MIR6767-201ENST00000637302 66 ntBASIC1□□□□□ -2.25
LYSMD3Q7Z3D4 RN7SL660P-201ENST00000614852 299 ntBASIC0.99□□□□□ -2.25
LYSMD3Q7Z3D4 MIR548J-201ENST00000408833 112 ntBASIC0.98□□□□□ -2.25
LYSMD3Q7Z3D4 MIR760-201ENST00000390220 80 ntBASIC0.97□□□□□ -2.25
LYSMD3Q7Z3D4 RNU6-930P-201ENST00000390938 100 ntBASIC0.97□□□□□ -2.25
LYSMD3Q7Z3D4 RNU6-848P-201ENST00000515948 107 ntBASIC0.97□□□□□ -2.25
LYSMD3Q7Z3D4 RNU6-617P-201ENST00000516147 107 ntBASIC0.97□□□□□ -2.25
LYSMD3Q7Z3D4 RNU6-473P-201ENST00000516164 107 ntBASIC0.97□□□□□ -2.25
LYSMD3Q7Z3D4 RNU6-1049P-201ENST00000516414 107 ntBASIC0.97□□□□□ -2.25
LYSMD3Q7Z3D4 MIR4490-201ENST00000582647 84 ntBASIC0.97□□□□□ -2.25
LYSMD3Q7Z3D4 MIR6857-201ENST00000613267 93 ntBASIC0.97□□□□□ -2.25
LYSMD3Q7Z3D4 MIR6515-201ENST00000619843 57 ntBASIC0.97□□□□□ -2.25
LYSMD3Q7Z3D4 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC0.97□□□□□ -2.25
LYSMD3Q7Z3D4 AC098934.3-201ENST00000430450 190 ntBASIC0.95□□□□□ -2.26
LYSMD3Q7Z3D4 MIR3925-201ENST00000584674 77 ntBASIC0.95□□□□□ -2.26
LYSMD3Q7Z3D4 AL353803.5-201ENST00000599815 141 ntBASIC0.94□□□□□ -2.26
LYSMD3Q7Z3D4 AL590095.2-201ENST00000604136 117 ntBASIC0.94□□□□□ -2.26
LYSMD3Q7Z3D4 AC211469.2-201ENST00000605461 205 ntBASIC0.94□□□□□ -2.26
LYSMD3Q7Z3D4 RNU6-110P-201ENST00000384508 104 ntBASIC0.93□□□□□ -2.26
LYSMD3Q7Z3D4 MIR532-201ENST00000385025 91 ntBASIC0.93□□□□□ -2.26
LYSMD3Q7Z3D4 RNU6-598P-201ENST00000364017 105 ntBASIC0.92□□□□□ -2.26
LYSMD3Q7Z3D4 RNA5SP128-201ENST00000365305 116 ntBASIC0.92□□□□□ -2.26
LYSMD3Q7Z3D4 MIR499B-201ENST00000636498 73 ntBASIC0.92□□□□□ -2.26
LYSMD3Q7Z3D4 MIR373-201ENST00000362273 69 ntBASIC0.91□□□□□ -2.26
LYSMD3Q7Z3D4 Y_RNA.540-201ENST00000384638 111 ntBASIC0.91□□□□□ -2.26
LYSMD3Q7Z3D4 MIR876-201ENST00000401147 81 ntBASIC0.91□□□□□ -2.26
LYSMD3Q7Z3D4 MIR598-201ENST00000384868 97 ntBASIC0.9□□□□□ -2.27
LYSMD3Q7Z3D4 MIR579-201ENST00000385221 98 ntBASIC0.9□□□□□ -2.27
LYSMD3Q7Z3D4 MIR548F3-201ENST00000408509 87 ntBASIC0.9□□□□□ -2.27
LYSMD3Q7Z3D4 RNU6-419P-201ENST00000517030 63 ntBASIC0.9□□□□□ -2.27
LYSMD3Q7Z3D4 U2.18-201ENST00000622185 84 ntBASIC0.9□□□□□ -2.27
LYSMD3Q7Z3D4 SNORD115-23-201ENST00000364461 82 ntBASIC0.89□□□□□ -2.27
LYSMD3Q7Z3D4 RNU7-129P-201ENST00000516128 62 ntBASIC0.89□□□□□ -2.27
LYSMD3Q7Z3D4 AP000676.1-201ENST00000533307 52 ntBASIC0.89□□□□□ -2.27
LYSMD3Q7Z3D4 MIR4698-201ENST00000577795 80 ntBASIC0.89□□□□□ -2.27
LYSMD3Q7Z3D4 MIR3973-201ENST00000579824 107 ntBASIC0.89□□□□□ -2.27
LYSMD3Q7Z3D4 CPEB3_ribozyme.1-201ENST00000408115 78 ntBASIC0.88□□□□□ -2.27
LYSMD3Q7Z3D4 AC008883.1-201ENST00000506562 193 ntTSL 3 BASIC0.88□□□□□ -2.27
LYSMD3Q7Z3D4 PSMC1P5-201ENST00000512850 177 ntBASIC0.88□□□□□ -2.27
LYSMD3Q7Z3D4 CYP3A137P-201ENST00000562436 69 ntBASIC0.88□□□□□ -2.27
LYSMD3Q7Z3D4 MIR5000-201ENST00000577717 103 ntBASIC0.88□□□□□ -2.27
LYSMD3Q7Z3D4 RNA5SP480-201ENST00000516840 109 ntBASIC0.87□□□□□ -2.27
LYSMD3Q7Z3D4 RNU7-151P-201ENST00000516930 53 ntBASIC0.87□□□□□ -2.27
LYSMD3Q7Z3D4 MIR106A-201ENST00000384870 81 ntBASIC0.86□□□□□ -2.27
LYSMD3Q7Z3D4 RPL39P28-201ENST00000465655 155 ntBASIC0.86□□□□□ -2.27
LYSMD3Q7Z3D4 SCARNA11.2-201ENST00000517183 154 ntBASIC0.86□□□□□ -2.27
LYSMD3Q7Z3D4 ZBTB41-201ENST00000367405 8478 ntAPPRIS P1 TSL 1 (best) BASIC0.85□□□□□ -2.27
LYSMD3Q7Z3D4 SNORD114-26-201ENST00000363543 72 ntBASIC0.85□□□□□ -2.27
LYSMD3Q7Z3D4 RNU7-160P-201ENST00000516660 62 ntBASIC0.85□□□□□ -2.27
LYSMD3Q7Z3D4 MIR4432-201ENST00000581823 84 ntBASIC0.85□□□□□ -2.27
LYSMD3Q7Z3D4 AC108676.2-201ENST00000605225 163 ntBASIC0.85□□□□□ -2.27
LYSMD3Q7Z3D4 PVT1_3.1-201ENST00000620853 95 ntBASIC0.85□□□□□ -2.27
LYSMD3Q7Z3D4 RNU6-838P-201ENST00000363399 108 ntBASIC0.84□□□□□ -2.27
LYSMD3Q7Z3D4 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.84□□□□□ -2.27
LYSMD3Q7Z3D4 TEX15-201ENST00000256246 10110 ntTSL 1 (best) BASIC0.83□□□□□ -2.28
LYSMD3Q7Z3D4 RNU6-924P-201ENST00000362926 108 ntBASIC0.83□□□□□ -2.28
LYSMD3Q7Z3D4 SNORD44.1-201ENST00000363202 61 ntBASIC0.83□□□□□ -2.28
LYSMD3Q7Z3D4 RNU6-863P-201ENST00000515989 104 ntBASIC0.83□□□□□ -2.28
LYSMD3Q7Z3D4 RNU6-1262P-201ENST00000516217 96 ntBASIC0.83□□□□□ -2.28
LYSMD3Q7Z3D4 RNU6-1206P-201ENST00000516339 103 ntBASIC0.83□□□□□ -2.28
LYSMD3Q7Z3D4 Y_RNA.698-201ENST00000516798 118 ntBASIC0.83□□□□□ -2.28
LYSMD3Q7Z3D4 Y_RNA.69-201ENST00000362885 109 ntBASIC0.82□□□□□ -2.28
LYSMD3Q7Z3D4 SNORD114-2-201ENST00000363953 78 ntBASIC0.82□□□□□ -2.28
LYSMD3Q7Z3D4 MIR146A-201ENST00000385201 99 ntBASIC0.82□□□□□ -2.28
LYSMD3Q7Z3D4 MIR4653-201ENST00000585107 83 ntBASIC0.82□□□□□ -2.28
LYSMD3Q7Z3D4 snoR1.1-201ENST00000628177 80 ntBASIC0.82□□□□□ -2.28
LYSMD3Q7Z3D4 RNU6ATAC27P-201ENST00000408289 119 ntBASIC0.81□□□□□ -2.28
LYSMD3Q7Z3D4 RNU6-945P-201ENST00000383947 107 ntBASIC0.79□□□□□ -2.28
LYSMD3Q7Z3D4 MIR548AA1-201ENST00000384971 97 ntBASIC0.79□□□□□ -2.28
LYSMD3Q7Z3D4 RNU6-696P-201ENST00000390834 107 ntBASIC0.79□□□□□ -2.28
LYSMD3Q7Z3D4 RNU6-351P-201ENST00000516097 100 ntBASIC0.79□□□□□ -2.28
LYSMD3Q7Z3D4 RNA5SP98-201ENST00000363158 137 ntBASIC0.78□□□□□ -2.28
LYSMD3Q7Z3D4 MIR545-201ENST00000385085 106 ntBASIC0.78□□□□□ -2.28
LYSMD3Q7Z3D4 RNU6ATAC31P-201ENST00000408513 126 ntBASIC0.78□□□□□ -2.28
LYSMD3Q7Z3D4 RNU6-247P-201ENST00000362636 107 ntBASIC0.77□□□□□ -2.29
LYSMD3Q7Z3D4 RNU6-995P-201ENST00000391244 107 ntBASIC0.77□□□□□ -2.29
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms