Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 SNORA33.1-201ENST00000364957 130 ntBASIC-1.18□□□□□ -2.6
CASC4Q6P4E1 SNORA62.4-201ENST00000365504 151 ntBASIC-1.18□□□□□ -2.6
CASC4Q6P4E1 SNORA15B-2-201ENST00000384058 135 ntBASIC-1.18□□□□□ -2.6
CASC4Q6P4E1 SNORA15B-1-201ENST00000384334 135 ntBASIC-1.18□□□□□ -2.6
CASC4Q6P4E1 AC140658.3-201ENST00000567603 271 ntBASIC-1.18□□□□□ -2.6
CASC4Q6P4E1 MIR4464-201ENST00000580818 92 ntBASIC-1.18□□□□□ -2.6
CASC4Q6P4E1 RNU6-208P-201ENST00000362431 107 ntBASIC-1.19□□□□□ -2.6
CASC4Q6P4E1 Y_RNA.190-201ENST00000363964 101 ntBASIC-1.19□□□□□ -2.6
CASC4Q6P4E1 AL031386.1-201ENST00000411940 142 ntTSL 5 BASIC-1.19□□□□□ -2.6
CASC4Q6P4E1 DLEU2_3.2-201ENST00000612883 73 ntBASIC-1.19□□□□□ -2.6
CASC4Q6P4E1 Y_RNA.250-201ENST00000364542 110 ntBASIC-1.2□□□□□ -2.6
CASC4Q6P4E1 RNU7-153P-201ENST00000516455 62 ntBASIC-1.2□□□□□ -2.6
CASC4Q6P4E1 AL353803.5-201ENST00000599815 141 ntBASIC-1.2□□□□□ -2.6
CASC4Q6P4E1 TMSB4XP3-201ENST00000445144 114 ntBASIC-1.21□□□□□ -2.6
CASC4Q6P4E1 RNU6-589P-201ENST00000516485 107 ntBASIC-1.21□□□□□ -2.6
CASC4Q6P4E1 RNU6-1216P-201ENST00000362590 107 ntBASIC-1.22□□□□□ -2.6
CASC4Q6P4E1 RNU6-1157P-201ENST00000384456 106 ntBASIC-1.22□□□□□ -2.6
CASC4Q6P4E1 RNU6-766P-201ENST00000362478 107 ntBASIC-1.23□□□□□ -2.61
CASC4Q6P4E1 RNU6-1056P-201ENST00000383996 107 ntBASIC-1.23□□□□□ -2.61
CASC4Q6P4E1 RNA5SP461-201ENST00000516451 104 ntBASIC-1.23□□□□□ -2.61
CASC4Q6P4E1 MIR6888-201ENST00000621977 67 ntBASIC-1.23□□□□□ -2.61
CASC4Q6P4E1 RNU6-1290P-201ENST00000362957 109 ntBASIC-1.24□□□□□ -2.61
CASC4Q6P4E1 RNU6-1246P-201ENST00000391064 107 ntBASIC-1.24□□□□□ -2.61
CASC4Q6P4E1 Y_RNA.606-201ENST00000410579 103 ntBASIC-1.24□□□□□ -2.61
CASC4Q6P4E1 MIR4306-201ENST00000583390 91 ntBASIC-1.24□□□□□ -2.61
CASC4Q6P4E1 RNU6-834P-201ENST00000362367 110 ntBASIC-1.25□□□□□ -2.61
CASC4Q6P4E1 SNORD115-27-201ENST00000364430 82 ntBASIC-1.25□□□□□ -2.61
CASC4Q6P4E1 RNU6-1168P-201ENST00000390831 104 ntBASIC-1.25□□□□□ -2.61
CASC4Q6P4E1 MIR1255B2-201ENST00000408618 67 ntBASIC-1.25□□□□□ -2.61
CASC4Q6P4E1 AL450471.1-201ENST00000447509 127 ntBASIC-1.25□□□□□ -2.61
CASC4Q6P4E1 LEKR1-212ENST00000640869 237 ntTSL 5 BASIC-1.25□□□□□ -2.61
CASC4Q6P4E1 Y_RNA.244-201ENST00000364484 109 ntBASIC-1.26□□□□□ -2.61
CASC4Q6P4E1 Y_RNA.290-201ENST00000364879 114 ntBASIC-1.26□□□□□ -2.61
CASC4Q6P4E1 AL445584.3-201ENST00000617173 78 ntBASIC-1.26□□□□□ -2.61
CASC4Q6P4E1 Y_RNA.544-201ENST00000384650 113 ntBASIC-1.27□□□□□ -2.61
CASC4Q6P4E1 MIR548M-201ENST00000408260 86 ntBASIC-1.27□□□□□ -2.61
CASC4Q6P4E1 RNA5SP180-201ENST00000516181 101 ntBASIC-1.27□□□□□ -2.61
CASC4Q6P4E1 RNU6-158P-201ENST00000517104 100 ntBASIC-1.27□□□□□ -2.61
CASC4Q6P4E1 CYP3A54P-201ENST00000566950 75 ntBASIC-1.27□□□□□ -2.61
CASC4Q6P4E1 hsa-mir-3607.1-201ENST00000637229 79 ntBASIC-1.27□□□□□ -2.61
CASC4Q6P4E1 Y_RNA.413-201ENST00000384007 102 ntBASIC-1.28□□□□□ -2.61
CASC4Q6P4E1 RNU6-22P-201ENST00000384355 107 ntBASIC-1.28□□□□□ -2.61
CASC4Q6P4E1 MTATP8P2-201ENST00000435212 202 ntBASIC-1.28□□□□□ -2.61
CASC4Q6P4E1 Y_RNA.754-201ENST00000476024 102 ntBASIC-1.28□□□□□ -2.61
CASC4Q6P4E1 RNU6-752P-201ENST00000516376 102 ntBASIC-1.28□□□□□ -2.61
CASC4Q6P4E1 snoU83B.1-201ENST00000517136 88 ntBASIC-1.28□□□□□ -2.61
CASC4Q6P4E1 Y_RNA.790-201ENST00000614282 102 ntBASIC-1.28□□□□□ -2.61
CASC4Q6P4E1 Y_RNA.782-201ENST00000614695 102 ntBASIC-1.28□□□□□ -2.61
CASC4Q6P4E1 U4.2-201ENST00000618561 85 ntBASIC-1.28□□□□□ -2.61
CASC4Q6P4E1 Y_RNA.181-201ENST00000363872 101 ntBASIC-1.29□□□□□ -2.62
CASC4Q6P4E1 RNU6-1117P-201ENST00000384525 104 ntBASIC-1.29□□□□□ -2.62
CASC4Q6P4E1 MIR519C-201ENST00000385053 87 ntBASIC-1.29□□□□□ -2.62
CASC4Q6P4E1 MIR365A-201ENST00000362260 87 ntBASIC-1.3□□□□□ -2.62
CASC4Q6P4E1 MIR521-2-201ENST00000384818 87 ntBASIC-1.3□□□□□ -2.62
CASC4Q6P4E1 MIR4723-201ENST00000585070 81 ntBASIC-1.3□□□□□ -2.62
CASC4Q6P4E1 RNU6-340P-201ENST00000364005 107 ntBASIC-1.31□□□□□ -2.62
CASC4Q6P4E1 RNU6ATAC29P-201ENST00000408088 125 ntBASIC-1.31□□□□□ -2.62
CASC4Q6P4E1 MIR1285-2-201ENST00000408311 88 ntBASIC-1.31□□□□□ -2.62
CASC4Q6P4E1 Y_RNA.698-201ENST00000516798 118 ntBASIC-1.31□□□□□ -2.62
CASC4Q6P4E1 Y_RNA.709-201ENST00000516952 92 ntBASIC-1.31□□□□□ -2.62
CASC4Q6P4E1 TRAJ37-201ENST00000612375 65 ntAPPRIS P1 BASIC-1.32□□□□□ -2.62
CASC4Q6P4E1 TRAJ61-201ENST00000390479 60 ntAPPRIS P1 BASIC-1.33□□□□□ -2.62
CASC4Q6P4E1 RNU6-1154P-201ENST00000391001 104 ntBASIC-1.33□□□□□ -2.62
CASC4Q6P4E1 SNORD77.2-201ENST00000391045 68 ntBASIC-1.33□□□□□ -2.62
CASC4Q6P4E1 MIR4441-201ENST00000582623 100 ntBASIC-1.33□□□□□ -2.62
CASC4Q6P4E1 MIR6739-201ENST00000622461 75 ntBASIC-1.33□□□□□ -2.62
CASC4Q6P4E1 RNU7-134P-201ENST00000458997 64 ntBASIC-1.34□□□□□ -2.62
CASC4Q6P4E1 RNU6-479P-201ENST00000516348 105 ntBASIC-1.34□□□□□ -2.62
CASC4Q6P4E1 AL031737.1-201ENST00000450125 223 ntBASIC-1.35□□□□□ -2.63
CASC4Q6P4E1 RNU6-706P-201ENST00000517229 104 ntBASIC-1.35□□□□□ -2.63
CASC4Q6P4E1 MIR2052-201ENST00000636055 55 ntBASIC-1.35□□□□□ -2.63
CASC4Q6P4E1 MIR450A1-201ENST00000362262 91 ntBASIC-1.36□□□□□ -2.63
CASC4Q6P4E1 RNU6-681P-201ENST00000364012 104 ntBASIC-1.36□□□□□ -2.63
CASC4Q6P4E1 SNORD114-3-201ENST00000364969 75 ntBASIC-1.36□□□□□ -2.63
CASC4Q6P4E1 SNORD63.1-201ENST00000516178 80 ntBASIC-1.36□□□□□ -2.63
CASC4Q6P4E1 RNU6-313P-201ENST00000516317 112 ntBASIC-1.36□□□□□ -2.63
CASC4Q6P4E1 MIR4668-201ENST00000582284 70 ntBASIC-1.36□□□□□ -2.63
CASC4Q6P4E1 HOTAIRM1_3.1-201ENST00000619974 59 ntBASIC-1.36□□□□□ -2.63
CASC4Q6P4E1 RNU6-633P-201ENST00000362612 103 ntBASIC-1.37□□□□□ -2.63
CASC4Q6P4E1 AL035461.1-201ENST00000421490 332 ntBASIC-1.38□□□□□ -2.63
CASC4Q6P4E1 RNU7-154P-201ENST00000516194 62 ntBASIC-1.38□□□□□ -2.63
CASC4Q6P4E1 RNU6-924P-201ENST00000362926 108 ntBASIC-1.39□□□□□ -2.63
CASC4Q6P4E1 SNORD115-37-201ENST00000363768 82 ntBASIC-1.39□□□□□ -2.63
CASC4Q6P4E1 SNORA26.4-201ENST00000391188 123 ntBASIC-1.39□□□□□ -2.63
CASC4Q6P4E1 RNU6-1108P-201ENST00000516308 104 ntBASIC-1.39□□□□□ -2.63
CASC4Q6P4E1 SNORD115-22-201ENST00000364456 82 ntBASIC-1.4□□□□□ -2.63
CASC4Q6P4E1 Y_RNA.264-201ENST00000364665 102 ntBASIC-1.41□□□□□ -2.64
CASC4Q6P4E1 MIR519A2-201ENST00000384990 87 ntBASIC-1.41□□□□□ -2.64
CASC4Q6P4E1 AC132825.6-201ENST00000638861 357 ntBASIC-1.41□□□□□ -2.64
CASC4Q6P4E1 SNORD115-33-201ENST00000363723 82 ntBASIC-1.42□□□□□ -2.64
CASC4Q6P4E1 RNY4P18-201ENST00000391107 89 ntBASIC-1.42□□□□□ -2.64
CASC4Q6P4E1 MIR1207-201ENST00000408249 87 ntBASIC-1.42□□□□□ -2.64
CASC4Q6P4E1 RNU2-51P-201ENST00000410708 197 ntBASIC-1.42□□□□□ -2.64
CASC4Q6P4E1 RNU6-518P-201ENST00000516056 96 ntBASIC-1.42□□□□□ -2.64
CASC4Q6P4E1 MIR3910-1-201ENST00000580936 111 ntBASIC-1.42□□□□□ -2.64
CASC4Q6P4E1 MIR6818-201ENST00000621576 65 ntBASIC-1.42□□□□□ -2.64
CASC4Q6P4E1 Y_RNA.273-201ENST00000364703 102 ntBASIC-1.43□□□□□ -2.64
CASC4Q6P4E1 Y_RNA.365-201ENST00000365537 102 ntBASIC-1.43□□□□□ -2.64
CASC4Q6P4E1 MIR29B1-201ENST00000385015 81 ntBASIC-1.43□□□□□ -2.64
CASC4Q6P4E1 Y_RNA.620-201ENST00000411009 88 ntBASIC-1.43□□□□□ -2.64
Retrieved 100 of 98,524 protein–RNA pairs in 10 ms